EWM22954.1, cds7717 (CDS) Nannochloropsis gaditana

Overview
NameEWM22954.1
Unique Namecds7717
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:203360..203615 +
Alignment locationCM002473.1:203937..204553 +
Alignment locationCM002473.1:204706..205074 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22954.1
Producteukaryotic initiation factor 4a
Orig transcript idgnl|cribi|Naga_100102g18.65.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:203360..203615 +
CM002473.1supercontigCM002473.1:203937..204553 +
CM002473.1supercontigCM002473.1:204706..205074 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif
IPR000629RNA-helicase_DEAD-box_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|585103687|gb|EWM22954.1| (eukaryotic initiation factor 4a [Nannochloropsis gaditana])

HSP 1 Score: 852.047 bits (2200), Expect = 0.000e+0
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0
Query:    1 MAADPKAAVSASGSADGPGLNSQQPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            MAADPKAAVSASGSADGPGLNSQQPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI
Sbjct:    1 MAADPKAAVSASGSADGPGLNSQQPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|301093191|ref|XP_002997444.1| (ATP-dependent RNA helicase eIF4A, putative [Phytophthora infestans T30-4] >gi|262110700|gb|EEY68752.1| ATP-dependent RNA helicase eIF4A, putative [Phytophthora infestans T30-4])

HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 315/390 (80.77%), Postives = 362/390 (92.82%), Query Frame = 0
Query:   24 QPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            Q +  DI+TNWDE +ETFD MDLREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFA+SILQ ID +++E QAL+LAPTRELA QI KV+V++GD++ ++QVHACVGGTAVR+DI  L+ GVH+VVGTPGRV DMINRRAL+   VK+FVLDEADEMLSRGFK+QIY+VF+FLPEKVQ ALFSATMPL+VLEVT++FMREP+RILVKRDELTLEGIKQF++A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D++Y++DIE FYNTQI+EMP +VADLI
Sbjct:   23 QLNEGDIETNWDEVIETFDGMDLREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQKIDINLKETQALILAPTRELAQQIVKVVVAIGDYM-SVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVLEVTHRFMREPIRILVKRDELTLEGIKQFFIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTHNDVRYLRDIEQFYNTQIDEMPMNVADLI 411          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|953498959|emb|CEG39679.1| (atp-dependent rna helicase eif4a [Plasmopara halstedii])

HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0
Identity = 315/390 (80.77%), Postives = 361/390 (92.56%), Query Frame = 0
Query:   24 QPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            Q +  DI+TNWDE +ETFD MDLREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFA+SILQ ID  ++E QAL+LAPTRELA QI KV+V++GD++ ++QVHACVGGTAVR+DI  L+ GVH+VVGTPGRV DMINRRAL+   VK+FVLDEADEMLSRGFK+QIY+VF+FLPEKVQ ALFSATMPL+VLEVT++FMREP+RILVKRDELTLEGIKQF++A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D++Y++DIE FYNTQI+EMP +VADLI
Sbjct:   22 QLNEGDIETNWDEVIETFDGMDLREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQKIDIGLKETQALILAPTRELAQQIVKVVVAIGDYM-SVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVLEVTHRFMREPIRILVKRDELTLEGIKQFFIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTHNDVRYLRDIEQFYNTQIDEMPMNVADLI 410          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|675210555|ref|XP_008914162.1| (ATP-dependent RNA helicase eIF4A [Phytophthora parasitica INRA-310] >gi|566010309|gb|ETI33220.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica P1569] >gi|567947744|gb|ETK73517.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica] >gi|567976426|gb|ETL26949.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica] >gi|568005915|gb|ETL80192.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica] >gi|568035820|gb|ETM33447.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica] >gi|568085587|gb|ETN00491.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica INRA-310] >gi|570313976|gb|ETO61924.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica P1976] >gi|570937756|gb|ETP03013.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica CJ01A1] >gi|570968071|gb|ETP31190.1| ATP-dependent RNA helicase eIF4A [Phytophthora parasitica P10297] >gi|970630761|gb|KUF77607.1| ATP-dependent RNA helicase eIF4A [Phytophthora nicotianae] >gi|970650959|gb|KUF89875.1| Histidinol dehydrogenase [Phytophthora nicotianae])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 317/401 (79.05%), Postives = 366/401 (91.27%), Query Frame = 0
Query:   14 SADGPGLNSQ-QPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            + +G   N Q Q +  DI+TNWDE +ETFD M+LREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFA+SILQ ID +++E QAL+LAPTRELA QI KV+V++GD++ ++QVHACVGGTAVR+DI  L+ GVH+VVGTPGRV DMINRRAL+   VK+FVLDEADEMLSRGFK+QIY+VF+FLPEKVQ ALFSATMPL+VLEVT +FMREP+RILVKRDELTLEGIKQF++A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D++Y++DIE FYNTQI+EMP +VADLI
Sbjct:   12 NVEGAQENEQVQLNEGDIETNWDEVIETFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQKIDINLKETQALILAPTRELAQQIVKVVVAIGDYM-SVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVLEVTRRFMREPIRILVKRDELTLEGIKQFFIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTHNDVRYLRDIEQFYNTQIDEMPMNVADLI 411          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|298708482|emb|CBJ30606.1| (eukaryotic initiation factor 4A [Ectocarpus siliculosus])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 318/385 (82.60%), Postives = 361/385 (93.77%), Query Frame = 0
Query:   29 DIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            DI+TNWDEC+ETFD+M+LRE+LLRGIYA+GFEKPSAIQQRAVKP+LMG+D IAQAQSGTGKTATFA+SILQ ID +  +CQALVLAPTRELA QI KV+ +LGDF++ LQVHACVGGTAVR+DI  L+NGVH+VVGTPGRVYDMI+R AL++  V LFVLDEADEMLSRGFK+QIYDVF++LPE+VQ ALFSATMPL+VLEVTN+FM EPVRILVK+DELTLEGIKQFY+AV+RE+WKLDTLCDLYETLTITQAIIYCNTRR+VDWL+E+M +RDFT+S MHGDM Q ERDVIM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGD++Y++DIE FY TQ+EEMP +VADLI
Sbjct:   21 DIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVAAADCQALVLAPTRELAQQIVKVVRALGDFMQ-LQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|673044495|ref|XP_008876208.1| (ATP-dependent RNA helicase eIF4A [Aphanomyces invadans] >gi|574468015|gb|ETV95035.1| ATP-dependent RNA helicase eIF4A [Aphanomyces invadans])

HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 319/386 (82.64%), Postives = 355/386 (91.97%), Query Frame = 0
Query:   28 ADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
             DIDTNW+E +E+FD MDLREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFAISILQ ID ++R  QAL+LAPTRELALQI KV+++LGD+  TL VHACVGGTAVR+DI  L+ GVH+VVGTPGRV DMINRRA K   VKLFVLDEADEMLSRGFK+QIYDVF+FLPEKVQ ALFSATMPL+VLEVT +FMR+P+RILVKRDELTLEGIKQFY+A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D +Y++DIE FYNTQI+EMP DVADLI
Sbjct:   24 GDIDTNWEEVIESFDGMDLREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAISILQKIDPALRATQALILAPTRELALQIVKVVMALGDYTGTL-VHACVGGTAVRDDIRTLQTGVHIVVGTPGRVGDMINRRAFKTDDVKLFVLDEADEMLSRGFKDQIYDVFRFLPEKVQVALFSATMPLDVLEVTQRFMRDPIRILVKRDELTLEGIKQFYIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTERMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTAADSRYLRDIEQFYNTQIDEMPMDVADLI 408          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|698785003|ref|XP_009825545.1| (ATP-dependent RNA helicase eIF4A [Aphanomyces astaci] >gi|574120048|gb|ETV85527.1| ATP-dependent RNA helicase eIF4A [Aphanomyces astaci])

HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 318/386 (82.38%), Postives = 356/386 (92.23%), Query Frame = 0
Query:   28 ADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
             DIDTNWDE +E+FD M+LREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFAISILQ ID ++RE QAL+LAPTRELALQI KV+++LGD+  T  VHACVGGTAVR+DI  L++GVH+VVGTPGRV DMINRRA +   VKLFVLDEADEMLSRGFK+QIYDVF+FLPEKVQ ALFSATMPL+VLEVT +FMR+P+RILVKRDELTLEGIKQFY+A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D +Y++DIE FYNTQI+EMP DVADLI
Sbjct:   23 GDIDTNWDEVIESFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAISILQKIDPALRETQALILAPTRELALQIVKVVMALGDYTGT-SVHACVGGTAVRDDIRTLQSGVHIVVGTPGRVGDMINRRAFRTDNVKLFVLDEADEMLSRGFKDQIYDVFRFLPEKVQVALFSATMPLDVLEVTQRFMRDPIRILVKRDELTLEGIKQFYIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTERMQAKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTAADARYLRDIEQFYNTQIDEMPMDVADLI 407          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|695382443|ref|XP_009517402.1| (hypothetical protein PHYSODRAFT_358814 [Phytophthora sojae] >gi|348690313|gb|EGZ30127.1| hypothetical protein PHYSODRAFT_358814 [Phytophthora sojae])

HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0
Identity = 314/390 (80.51%), Postives = 361/390 (92.56%), Query Frame = 0
Query:   24 QPSSADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            Q +  DI+TNWDE +ETFD M+LREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFA+SILQ ID +++E QAL+LAPTRELA QI KV+V++GD++ ++QVHACVGGTAVR+DI  L+ GVH+VVGTPGRV DMINRRAL+   VK+FVLDEADEMLSRGFK+QIY+VF+FLPEKVQ ALFSATMPL+VLEVT +FMREP+RILVKRDELTLEGIKQF++A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D++Y++DIE FYNTQI+EMP +VADLI
Sbjct:  185 QLNEGDIETNWDEVIETFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQKIDINLKETQALILAPTRELAQQIVKVVVAIGDYM-SVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVLEVTRRFMREPIRILVKRDELTLEGIKQFFIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTHNDVRYLRDIEQFYNTQIDEMPMNVADLI 573          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|1173944149|gb|OQR92916.1| (ATP-dependent RNA helicase eIF4A [Achlya hypogyna])

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 319/406 (78.57%), Postives = 364/406 (89.66%), Query Frame = 0
Query:   15 ADGP----GLNSQQPS---SADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            +D P    G  S  P+     DIDTNW+E +E+FD M+LREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFAISILQ ID+++RE QAL+LAPTRELA QI KV++++GD++  + VHACVGGTAVR+DI  L++GVH+VVGTPGRV DMINRRA +   VKLFVLDEADEMLSRGFK+QIYDVF+FLPEKVQ ALFSATMPL+VLEVT +FMR+P+RILVKRDELTLEGIKQFY+A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D +Y++DIE FYNTQI+EMP DVADLI
Sbjct:    2 SDAPRSPRGEESHAPAPIVDGDIDTNWEEVIESFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAISILQQIDSALRETQALILAPTRELAQQIVKVILAIGDYM-GVSVHACVGGTAVRDDIRTLQSGVHIVVGTPGRVGDMINRRAFRTDAVKLFVLDEADEMLSRGFKDQIYDVFRFLPEKVQVALFSATMPLDVLEVTQRFMRDPIRILVKRDELTLEGIKQFYIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTSADARYLRDIEQFYNTQIDEMPMDVADLI 406          
BLAST of EWM22954.1 vs. NCBI_GenBank
Match: gi|669139112|ref|XP_008605124.1| (ATP-dependent RNA helicase eIF4A [Saprolegnia diclina VS20] >gi|813109287|ref|XP_012194524.1| ATP-dependent RNA helicase eIF4A [Saprolegnia parasitica CBS 223.65] >gi|530743168|gb|EQC41410.1| ATP-dependent RNA helicase eIF4A [Saprolegnia diclina VS20] >gi|641541099|gb|KDO34862.1| ATP-dependent RNA helicase eIF4A [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 318/398 (79.90%), Postives = 362/398 (90.95%), Query Frame = 0
Query:   19 GLNSQQPS---SADIDTNWDECVETFDSMDLREDLLRGIYAFGFEKPSAIQQRAVKPVLMGRDVIAQAQSGTGKTATFAISILQSIDTSIRECQALVLAPTRELALQIRKVLVSLGDFVETLQVHACVGGTAVREDIAKLRNGVHVVVGTPGRVYDMINRRALKMSYVKLFVLDEADEMLSRGFKEQIYDVFKFLPEKVQCALFSATMPLEVLEVTNKFMREPVRILVKRDELTLEGIKQFYVAVEREDWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTEQMTKRDFTVSAMHGDMDQRERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDLQYMKDIEVFYNTQIEEMPSDVADLI 413
            G +S  P+     DIDTNW+E +E+FD M+LREDLLRGIYA+GFEKPSAIQQRAVKP+L+G D IAQAQSGTGKTATFAISILQ ID+++RE QAL+LAPTRELA QI KV++++GD++  L VHACVGGTAVR+DI  L++GVH+VVGTPGRV DMINRRA +   VKLFVLDEADEMLSRGFK+QIYDVF+FLPEKVQ ALFSATMPL+VLEVT +FMR+P+RILVKRDELTLEGIKQFY+A++RE+WK DTLCDLYETLTITQAIIYCNTRRKVDWLTE+M  +DFTVSAMHGDM+QRERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D +Y++DIE FYNTQI+EMP DVADLI
Sbjct:   10 GEDSHAPAPIVDGDIDTNWEEVIESFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAISILQQIDSALRETQALILAPTRELAQQIVKVILAIGDYMGCL-VHACVGGTAVRDDIRTLQSGVHIVVGTPGRVGDMINRRAFRTDSVKLFVLDEADEMLSRGFKDQIYDVFRFLPEKVQVALFSATMPLDVLEVTQRFMRDPIRILVKRDELTLEGIKQFYIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTSADARYLRDIEQFYNTQIDEMPMDVADLI 406          
The following BLAST results are available for this feature:
BLAST of EWM22954.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103687|gb|EWM22954.1|0.000e+0100.00eukaryotic initiation factor 4a [Nannochloropsis g... [more]
gi|301093191|ref|XP_002997444.1|0.000e+080.77ATP-dependent RNA helicase eIF4A, putative [Phytop... [more]
gi|953498959|emb|CEG39679.1|0.000e+080.77atp-dependent rna helicase eif4a [Plasmopara halst... [more]
gi|675210555|ref|XP_008914162.1|0.000e+079.05ATP-dependent RNA helicase eIF4A [Phytophthora par... [more]
gi|298708482|emb|CBJ30606.1|0.000e+082.60eukaryotic initiation factor 4A [Ectocarpus silicu... [more]
gi|673044495|ref|XP_008876208.1|0.000e+082.64ATP-dependent RNA helicase eIF4A [Aphanomyces inva... [more]
gi|698785003|ref|XP_009825545.1|0.000e+082.38ATP-dependent RNA helicase eIF4A [Aphanomyces asta... [more]
gi|695382443|ref|XP_009517402.1|0.000e+080.51hypothetical protein PHYSODRAFT_358814 [Phytophtho... [more]
gi|1173944149|gb|OQR92916.1|0.000e+078.57ATP-dependent RNA helicase eIF4A [Achlya hypogyna][more]
gi|669139112|ref|XP_008605124.1|0.000e+079.90ATP-dependent RNA helicase eIF4A [Saprolegnia dicl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7738rna7738Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications