rna7734, rna7734 (mRNA) Nannochloropsis gaditana

Overview
Namerna7734
Unique Namerna7734
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length201
Alignment locationCM002473.1:193276..196459 -

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Properties
Property NameValue
Productputative microtubule-associated protein
Orig transcript idgnl|cribi|Naga_100102g13.67.mrna
Orig protein idgnl|cribi|Naga_100102g13.67
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:193276..196459 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100102g13gene7488Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22956.1cds7713Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7734rna7734-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7734 ID=rna7734|Name=rna7734|organism=Nannochloropsis gaditana|type=mRNA|length=201bp
ATGCACCGGAAAGGGAGAGGACTCCTAGTAAAGATTAGACTTGATCGACT
ATTTACAAAATATGGGACTAATTTGAAGCGGACAAAAATCAGAAAATTGT
GTATCAGGAGGGGCAAGTGTCTGTATAAAGAAAAAAGCTTGTCTTTATCA
CAATTTGCCACGATTCGTGATTTTCTGAGGGGGGACAGGGAGAGCCTTTA
G
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protein sequence of rna7734

>rna7734-protein ID=rna7734-protein|Name=rna7734|organism=Nannochloropsis gaditana|type=polypeptide|length=480bp
MGEDNCSVTPGDARVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDH
LRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDV
EYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHS
ARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVV
KVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGKEQVLSGDW
GGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIH
APVSLFKAHAQCVSGVKWHPKESLAFTSSWDHSVKIWDLEHQNCVQTLNG
SKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMAS
CGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALA
LCFGRARDQLGMWAIFTGGTDGVVRRFETS
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mRNA from alignment at CM002473.1:193276..196459-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7734 ID=rna7734|Name=rna7734|organism=Nannochloropsis gaditana|type=mRNA|length=3184bp|location=Sequence derived from alignment at CM002473.1:193276..196459- (Nannochloropsis gaditana)
AACAGGAGAACGGAAAAGGGCAGACATTAACTTTACTTTTTGAAAGAAAG
CAACTTTAACGGCGAAAGTCACGCCCTTGGCGAGGAAAACCGCAGCCAGT
GGAGCCCGAAGACAAACCGGCCGGGAGGGGGGATGAGGGAGGGGTTTGAT
GCAGTGTCTTTGATTATGTGGACATGGTAGACATTATTCAATGCGTATAT
CTTGTGGTCCTTCCACGTGAATGATAACTCACACTGCCTCCCTCATCATA
GTATCTTCCCCAGGTCGACGCAAGCTGGCAATCCTCCCAAGCCTTAGCCA
GGTATGTATGTGCTGTCTCGGGGGGGGCCGCCACATGGTATTTTTCTCAG
ACATACGACCACTTACTCGTTATAATGCTTGAGGAAACTTGGTGACGTGC
TAGACATTGTTCTTCGATGTGACCAAATGAATACCTGGGGCACCAAGGGC
GCCATCCCTTTCACGGTTTCTCGCGCTTTTTAAGTCTTGATGCGCTCACG
TCTCCGCACCACATGCTGATTGACCACAAAAAATGAAGCCGCAATACGCT
TACGGGTGTCATAATATTCTCTTGTTCTGGCTTGGAGCCTTGACGACCCA
ATCAGTCCCCCTCTTTCATCACTGAGGGTATCCTGATAGTTTGACGTCGA
AAAGAGAAATTGAGACGATAGCCTAGTGATGTGTAGAGGCTCCACCGCAA
TCACTTCTAGCACCGTCTCGAAATGTATAGCATCCCATGCCTCGCTTTTC
GGGCTGCTGGACTGTAGTATTATTTTTGCCACGTACCATCCGAAGGCTTG
AGATAATCGCTTTCTTTGCGAAACGAAGCGGGACATTGACGAATTTCTAA
CGTCGACCTCGTCTTTATTCCCTTTCTATGTTCATAGGGGAATGGGGGAA
GATAATTGCAGCGTCACGCCTGGAGATGCACGGGTCCGGCTCCGTTTCTT
CACGCGAGACCCTACTATTCGTGTCAGCGAAGCCCCTCTGGCTGTACCTG
TCTCTCTCAACAGGCGGGGGCTTTCCGAGGTCATCGACCATCTTCGCGGG
AAGGCCGCAGAAAGTGAAATAACGCGAAATAAGAAGACACATAGAGGGTA
TGATTTCGTGATCGAAAACCAGCTCTTGCGGTGTCCTCTGGAGAAGTTTC
TGCGCGCCACCGGGATCTCCACGGAGTCGAGCGTGGATGTGGAGTATTTC
CGAACGCTTCAGGCACCAGTGCAAGGTTCTTCTAGCAAATCAGAGGCGGC
GTGGGTGGGGTCGCTCGTGGCTTGTGAGGGGAATGGGGGGGAGGACATGG
TTTTAGCTGGGGCTTTCGATGGGAGTCTGCGATGTCACTCAGCGCGGGGC
TGCGTCGAGCTCGGGGGGCGCTGGCTCCATGCTCATCGTGGACCGATCAA
AGCGATGGCAGCGTTGGAGCCCGGAGCCCAGGAACAAGAGTCTGGGGCAT
CAGAGAGAGGCGTCGTGACGGTGGGAAAGGACCAGGTGGTCAAGGTGTGG
CAGGTGCTGGTGGGAGGGAGGGGCGAGAGGAAGGGTGGGAAGGAGGCAAC
GGTGCGTCCTGTGAGCACCCTGATCGGACACGAGAATAGCGTGGAGTGCG
TGGCTGTGCGTGGGAAGGAACAGGTGCTGAGCGGCGACTGGGGGGGGGTG
CTTTGCCTGTGGAAGATAGACAAAGAGGAGAGGACCCCGGTTACCGCACC
CTCCTTCACCAGCGTCCACAAAAGGAAGAAGCGTAAAGTTGTCGAGGGAA
TGGATGACGAGGATGCATCACCGCCAATTCCCGGCATCCATGCGCCCGTG
TCGCTCTTCAAGGCTCACGCGCAGTGCGTGAGCGGCGTCAAATGGCACCC
TAAGGAGTCCCTGGCCTTCACCTCCTCCTGGGACCACTCTGTCAAAATCT
GGGACCTCGAGCACCAGAACTGCGTGCAGACGCTTAATGGGAGCAAGGTC
GTCACCTCCTTTGCCATTTCATCAGGCAATCTTCTCGGCGCAGGGCACCC
CGACGGACGGCTGCGGATATGGGACGTGCGCTCCGTGGAAGAGAAGCAGG
GCATGACGCTAGCGGCCCCCGGAAAGCGGGTCATGGCAAGCTGTGGCTCC
TGGATCTCTGGCGTGGCATGGCACCCGCAGCGGGACAACGTGCTTGCAGC
TATCTCTCACGACGGGTATCTTCGCGTCTGGGACCTGCGGGCCACCAAGC
CCCTTCACACCCTCCGCGCGCACGAGGATAAGGCTCTTGCCCTTTGTTTT
GGGCGGGCTCGTGATCAGTTGGGGATGTGGGCCATCTTCACAGGGGGTAC
AGACGGGGTTGTTCGCCGATTCGAGACTTCGTAAAATGCAGCGTGACTCC
TCAGACACCAGAAATTTTGCGTGTTATTCAAAAGTACTGCGGGATGATTA
TTAATCATTTTTGTGAATTCCCAACTTCGTTTTTGTACTTGTTTCCTTTC
GCTTGGATGGCACGTTTTGGCCCGTAAGGTACGCAAAGAGACTCGATGTG
GTGATCCTTCGTCTTCACACGAACACCTCGGGCAGATATTTGAAAGGGGC
AATATATTTAGACATGAAGAGGTGACCCTAGCGTAAGCGACATGAAGAGA
CTGGTAATCTTGAGCCTCGCTGTAGAGCTAGCTGATTCCGGACGATGCTG
AAGGTGGGCATCGGACGGACGGACGACTCGGCGACGGGTGCCCGAGTCAA
AGGCATGGCAAAGCATCAGCGTTAGTAAGAAATGAATTGTCTTGCTACGA
GTGTGCCTTGTTTACCACCGATGACCTCCGAGGCAGACAAGTTCGTCCTC
AAATGTTGATACTAGTTCAGTTTTTGGAACACACATTAAAGGAAGGACAA
GAAGCAGCTCGTTGGGCCAATGTCTGCCCCTTGTGAGCTACACAGCTGTG
CAGTACGATGACACGGCTCGCAAAGCGACTGGGGGGCACTGGAGGTGGAG
CCTTGAAGTCGTTGCTCTACATCAGTGCGAGCACTTCCTTACCCGCCATC
GGACCTGCCGGAGCTTTAGGTAGGCAAAGCTCACTGATCTTCTCCTGCAT
GCTCTAAAGGCTCTCCCTGTCCCCCCTCAGAAAATCACGCTGCCAAAATA
AATTGCAGGAGTACTGAACTTCATGCAATTGTTTTAATCTCCACAACGAC
GCATGAGTAAAAAGACGGGCAACCTTTTTTAATT
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Coding sequence (CDS) from alignment at CM002473.1:193276..196459-

>rna7734 ID=rna7734|Name=rna7734|organism=Nannochloropsis gaditana|type=CDS|length=1443bp|location=Sequence derived from alignment at CM002473.1:193276..196459- (Nannochloropsis gaditana)
ATGGGGGAAGATAATTGCAGCGTCACGCCTGGAGATGCACGGGTCCGGCT
CCGTTTCTTCACGCGAGACCCTACTATTCGTGTCAGCGAAGCCCCTCTGG
CTGTACCTGTCTCTCTCAACAGGCGGGGGCTTTCCGAGGTCATCGACCAT
CTTCGCGGGAAGGCCGCAGAAAGTGAAATAACGCGAAATAAGAAGACACA
TAGAGGGTATGATTTCGTGATCGAAAACCAGCTCTTGCGGTGTCCTCTGG
AGAAGTTTCTGCGCGCCACCGGGATCTCCACGGAGTCGAGCGTGGATGTG
GAGTATTTCCGAACGCTTCAGGCACCAGTGCAAGGTTCTTCTAGCAAATC
AGAGGCGGCGTGGGTGGGGTCGCTCGTGGCTTGTGAGGGGAATGGGGGGG
AGGACATGGTTTTAGCTGGGGCTTTCGATGGGAGTCTGCGATGTCACTCA
GCGCGGGGCTGCGTCGAGCTCGGGGGGCGCTGGCTCCATGCTCATCGTGG
ACCGATCAAAGCGATGGCAGCGTTGGAGCCCGGAGCCCAGGAACAAGAGT
CTGGGGCATCAGAGAGAGGCGTCGTGACGGTGGGAAAGGACCAGGTGGTC
AAGGTGTGGCAGGTGCTGGTGGGAGGGAGGGGCGAGAGGAAGGGTGGGAA
GGAGGCAACGGTGCGTCCTGTGAGCACCCTGATCGGACACGAGAATAGCG
TGGAGTGCGTGGCTGTGCGTGGGAAGGAACAGGTGCTGAGCGGCGACTGG
GGGGGGGTGCTTTGCCTGTGGAAGATAGACAAAGAGGAGAGGACCCCGGT
TACCGCACCCTCCTTCACCAGCGTCCACAAAAGGAAGAAGCGTAAAGTTG
TCGAGGGAATGGATGACGAGGATGCATCACCGCCAATTCCCGGCATCCAT
GCGCCCGTGTCGCTCTTCAAGGCTCACGCGCAGTGCGTGAGCGGCGTCAA
ATGGCACCCTAAGGAGTCCCTGGCCTTCACCTCCTCCTGGGACCACTCTG
TCAAAATCTGGGACCTCGAGCACCAGAACTGCGTGCAGACGCTTAATGGG
AGCAAGGTCGTCACCTCCTTTGCCATTTCATCAGGCAATCTTCTCGGCGC
AGGGCACCCCGACGGACGGCTGCGGATATGGGACGTGCGCTCCGTGGAAG
AGAAGCAGGGCATGACGCTAGCGGCCCCCGGAAAGCGGGTCATGGCAAGC
TGTGGCTCCTGGATCTCTGGCGTGGCATGGCACCCGCAGCGGGACAACGT
GCTTGCAGCTATCTCTCACGACGGGTATCTTCGCGTCTGGGACCTGCGGG
CCACCAAGCCCCTTCACACCCTCCGCGCGCACGAGGATAAGGCTCTTGCC
CTTTGTTTTGGGCGGGCTCGTGATCAGTTGGGGATGTGGGCCATCTTCAC
AGGGGGTACAGACGGGGTTGTTCGCCGATTCGAGACTTCGTAA
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Synonyms
Publications