EWM22956.1, cds7713 (CDS) Nannochloropsis gaditana

Overview
NameEWM22956.1
Unique Namecds7713
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:194126..195568 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22956.1
Productputative microtubule-associated protein
Orig transcript idgnl|cribi|Naga_100102g13.67.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:194126..195568 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR012972NLE
IPR001680WD40_repeat
Homology
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|585103689|gb|EWM22956.1| (putative microtubule-associated protein [Nannochloropsis gaditana])

HSP 1 Score: 979.548 bits (2531), Expect = 0.000e+0
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0
Query:    1 MGEDNCSVTPGDARVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGKEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPKESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRFETS 480
            MGEDNCSVTPGDARVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGKEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPKESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRFETS
Sbjct:    1 MGEDNCSVTPGDARVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGKEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPKESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRFETS 480          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|695442149|ref|XP_009533383.1| (hypothetical protein PHYSODRAFT_563571 [Phytophthora sojae] >gi|348670817|gb|EGZ10638.1| hypothetical protein PHYSODRAFT_563571 [Phytophthora sojae])

HSP 1 Score: 231.106 bits (588), Expect = 3.646e-67
Identity = 151/473 (31.92%), Postives = 242/473 (51.16%), Query Frame = 0
Query:   14 RVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGKEQ-VLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPK-----ESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQ---RDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRF 477
            +VR++F T+D +IRV+E P AVP  LNRRGLS+V++HL     +          R +DF+I+   LR  L+KFL+ +G+S E+ + +EY   L  P Q  S      WV ++ A +G    D+V+ G +DG LR + A+G  +     + AH+G +KA++ + P A++      E  + + GKDQ+ ++W         R     A + PV+ L GH NSV+ V +    Q V++G W   + +W+       P  +         KK K  E   D   +     + A + L   H   V+GV + PK     E +  ++  D +V++WDL  Q+C Q+L G++ V+  ++S+  L+   HPD  +R+WD R+ +  + +      +R   S   W+S VAWHP     +++  +  +DG  +VWD R+T PLHT+ AHE K L L +    +     A  TGG D  +  F
Sbjct:    7 QVRVKFVTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATGDKP---------RPFDFLIDGLFLRSSLDKFLQTSGVSEEALLTLEYVEALPEP-QKQSGSDHPDWVSAVAALDG----DLVVTGCYDGVLRVYDAQGDCKAS---VKAHQGAVKAVS-VAPSAEKD----GEFVIASSGKDQLAQLW---------RFSTITAKLAPVAALTGHLNSVDTVQMHASGQRVVTGSWDNTVRVWQ------APGASEDAGEQRSAKKHKKTE---DGAGAVSFQQLEAEIVLV-GHTSYVTGVAFRPKNSEHDEDVVVSAGSDRTVRLWDLVTQSCSQSLVGNRAVSDLSVSANGLVLTAHPDNCVRLWDPRAQQSGESIV-----QRTFRSHKEWVSSVAWHPDSSSNEHLFVSGGYDGTAKVWDARSTIPLHTVNAHEGKLLDLSWRNQGEGDNNVAFVTGGEDKKLNFF 433          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|675178799|ref|XP_008898284.1| (hypothetical protein PPTG_06147 [Phytophthora parasitica INRA-310] >gi|566008773|gb|ETI31684.1| hypothetical protein F443_21394 [Phytophthora parasitica P1569] >gi|567946243|gb|ETK72054.1| hypothetical protein L915_20793 [Phytophthora parasitica] >gi|567974907|gb|ETL25482.1| hypothetical protein L916_20676 [Phytophthora parasitica] >gi|568004371|gb|ETL78695.1| hypothetical protein L917_20538 [Phytophthora parasitica] >gi|568034288|gb|ETM31961.1| hypothetical protein L914_20553 [Phytophthora parasitica] >gi|568101183|gb|ETN15869.1| hypothetical protein PPTG_06147 [Phytophthora parasitica INRA-310] >gi|570312440|gb|ETO60388.1| hypothetical protein F444_21413 [Phytophthora parasitica P1976] >gi|570936238|gb|ETP01495.1| hypothetical protein F441_21283 [Phytophthora parasitica CJ01A1] >gi|570966529|gb|ETP29648.1| hypothetical protein F442_21232 [Phytophthora parasitica P10297])

HSP 1 Score: 226.098 bits (575), Expect = 2.934e-65
Identity = 146/472 (30.93%), Postives = 245/472 (51.91%), Query Frame = 0
Query:   14 RVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRG-KEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPK-----ESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDN--VLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRF 477
            +VR++F T+D +IRV+E P AVP  LNRRGLS+V++HL              + R +DF+I+   LR  L+K+L+  G+S E+ + +EY   L  P Q  +      WV ++ + +    +++V+ G +DG LR + A+G  +     + AH+G IKA++          S + E  + + GKDQ+ ++W+  +         K + + P++ L GH NSV+ V +    ++V++G W   + +W+      TP  +    S  K KK       +D+  +     + A + L   H   V+GV + PK     E +  ++  D +V++WDL  Q+C Q L G++ V+  ++++  L+   HPD  +R+WD R+ +  + +      +R   S   W+S V WHP  +N  +  + S+DG  +VWD R+T PLHT+ AHE K L L +   R+Q    A  TGG D  +  F
Sbjct:    7 QVRVKFVTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATG---------DSPRPFDFLIDGLFLRSSLDKYLQTHGVSEEALLTLEYVEALPEP-QKQNGSDHPDWVSAVASLD----DELVVTGCYDGVLRVYDAQGDCKAS---VKAHQGAIKAVSV-------ASSKSGEFIIASSGKDQLAQLWRYTI---------KLSKLSPMAALTGHLNSVDAVQMHALGKRVVTGSWDNTVRVWQ------TPEESGEQRSAKKHKK------TEDDAGAVSFQQLEAEIVLV-GHTSYVTGVAFRPKTSEHDEDVVVSAGSDRNVRLWDLVTQSCSQALVGNRAVSDLSVNANGLILTAHPDHCVRLWDPRAQQSGESIV-----QRTFRSHKEWVSSVDWHPDSNNEHLFVSGSYDGTAKVWDARSTIPLHTVSAHEGKLLDLSW---RNQNEGVAFVTGGDDKKLNFF 424          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|970633938|gb|KUF79381.1| (Ribosome biogenesis protein WDR12 [Phytophthora nicotianae] >gi|970636161|gb|KUF80882.1| Ribosome biogenesis protein WDR12 [Phytophthora nicotianae])

HSP 1 Score: 225.328 bits (573), Expect = 1.316e-64
Identity = 146/472 (30.93%), Postives = 245/472 (51.91%), Query Frame = 0
Query:   14 RVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGK-EQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPK-----ESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDN--VLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRF 477
            +VR++F T+D +IRV+E P AVP  LNRRGLS+V++HL              + R +DF+I+   LR  L+K+L+  G+S E+ + +EY   L  P Q  +      WV ++ + +    +++V+ G +DG LR + A+G  +     + AH+G IKA++          S + E  + + GKDQ+ ++W+  +         K + + P++ L GH NSV+ V +    ++V++G W   + +W+      TP  +    S  K KK       +D+  +     + A + L   H   V+GV + PK     E +  ++  D +V++WDL  Q+C Q L G++ V+  ++++  L+   HPD  +R+WD R+ +  + +      +R   S   W+S V WHP  +N  +  + S+DG  +VWD R+T PLHT+ AHE K L L +   R+Q    A  TGG D  +  F
Sbjct:   48 QVRVKFVTKDASIRVTETPFAVPTRLNRRGLSQVVNHLLATG---------DSPRPFDFLIDGLFLRSSLDKYLQTHGVSEEALLTLEYVEALPEP-QKQNGSDHPDWVSAVASLD----DELVVTGCYDGVLRVYDAQGDCKAS---VKAHQGAIKAVSV-------ASSKSGEFIIASSGKDQLAQLWRYTI---------KLSKLSPMAALTGHLNSVDAVQMHALGKRVVTGSWDNTVRVWQ------TPEESGEQRSAKKHKK------TEDDAGAVSFQQLEAEIVLV-GHTSYVTGVAFRPKTSEHDEDVVVSAGSDRNVRLWDLVTQSCSQALVGNRAVSDLSVNANGLILTAHPDHCVRLWDPRAQQSGESIV-----QRTFRSHKEWVSSVDWHPDSNNEHLFVSGSYDGTAKVWDARSTIPLHTVSAHEGKLLDLSW---RNQNEGVAFVTGGDDKKLNFF 465          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|301107890|ref|XP_002903027.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098145|gb|EEY56197.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 221.09 bits (562), Expect = 1.955e-63
Identity = 143/471 (30.36%), Postives = 236/471 (50.11%), Query Frame = 0
Query:   14 RVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARG-CVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGK-EQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPK-----ESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRF 477
            +VR++F T+D +IRV+E P AVP  LNRRGLS+V++HL              + R +DF+I+   LR  L+K+L+   +S E+ + +EY   L  P Q  +      WV ++ + +    +++V+ G +DG LR + A+G C           +  +KA            S + E  V + GKDQ+ ++W+  V         K + + P++ L GH NSV+ V +     +V++G W   + +W+      TP  +   +     KK K  E   D+  +     + A + L   H   V+GV + PK     E +  ++  D SV++WDL  Q+C Q L G++ V+   +++  L+   HPD  +R+WD R+ +  + +      +R   S   W+S V+WHP  +++  +  +DG  +VWD R+T PLHT+ AHE K L L +   R+Q    A  TGG D  +  F
Sbjct:    7 QVRVKFVTKDGSIRVTETPFAVPSRLNRRGLSQVVNHLLATG---------DSPRPFDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEP-QKQNGSDHPDWVSAVASLD----DELVVTGCYDGVLRVYDAQGDC-----------KASVKAHQGAVKAVSVSSSKSGEFVVASSGKDQLAQLWRYTV---------KSSKLSPLAALTGHLNSVDAVQLHASGNRVVTGSWDNTVRVWQ------TPNGSEDSSEQRSSKKHKKTE---DDAGAVSFRQLEAEIVLV-GHTSYVTGVAFRPKTSEHDEDVVVSAGSDRSVRLWDLVTQSCSQALAGNRAVSDLTVNATGLILTAHPDHCVRLWDPRAQQSGESIV-----QRTFRSHKEWVSSVSWHPSNEHLFVSGGYDGTAKVWDARSTIPLHTVSAHEGKVLDLSW---RNQEESVAFVTGGDDKKLNFF 425          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|953494567|emb|CEG44161.1| (wd repeat domain-containing protein [Plasmopara halstedii])

HSP 1 Score: 214.927 bits (546), Expect = 9.951e-61
Identity = 145/474 (30.59%), Postives = 238/474 (50.21%), Query Frame = 0
Query:   14 RVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGK-EQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHP-----KESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDN---VLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIF-TGGTDGVVRRF 477
            ++R++F T+D +IRV+E P AVP  LNRRGLS+V++HL              + R +DF+I    LR  L K+L+  G+S E+ + +EY   L  P Q         WV ++     +  +D V+ G +DG LR    +G  +   +   AH+G IK+++     A   +SG  E  + + GKDQ+ ++W         R   K A + P++ L GH NSV+ V +    ++V++G W   + +W    +    +  PS   + K++K        D  +S     + A + L   H   V+ V + P      E +  ++  D  V++WD   Q+C Q+L G++ V+  ++++  L+   HPD  +R+WD R+ +  + +      +R   S  +W+S VAWHP  +N   +  +  +DG  +VWD+R+T PLHT+ AHE K L L +   R+Q      F TGG D  V  F
Sbjct:   26 QIRVKFVTKDASIRVTETPFAVPTHLNRRGLSQVVNHLLNTG---------NSLRPFDFLINGLFLRSSLFKYLQTHGLSDEALLTLEYVEALPEP-QNHKKNDLPDWVSAI----ADLTDDFVVTGCYDGVLRVFDTQGDCQASVK---AHQGAIKSISV----ASCDKSG--EFVIASSGKDQLAQIW---------RYSVKTADLSPLAMLTGHLNSVDSVQMHASGKRVITGSWDNTVRVW----QNPIDLNVPSDQRLTKKQKNTA-----DGSSSGTFQHLEAAIVL-TGHTSYVTSVAFRPTTSKHDEDVVVSAGSDRVVRLWDFVTQSCSQSLVGNRAVSDLSVNAHGLILTAHPDHCIRLWDPRAQQSGESIV-----QRTFRSHKAWVSSVAWHPNDNNHEHLFLSGGYDGTAKVWDVRSTIPLHTVSAHEGKLLDLSW---RNQHNSNVAFATGGDDKKVNFF 449          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|299471418|emb|CBN79371.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 213.386 bits (542), Expect = 5.311e-60
Identity = 155/486 (31.89%), Postives = 238/486 (48.97%), Query Frame = 0
Query:   14 RVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKG-GKEATVRPVSTLIGHENSVECVAVR--------GKEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKW-----HPK-------ESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAIS-SGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRF 477
            +VR++F T+ P+IRV+E P+AVP SL R GLSEV++HL G+   +           +D ++  + LR  L   ++   +S E+ ++VEY   L+ P +   +  +  WV S VA  G G E  V  G +DG LR +   GC         AH+ P+ A+ A+   A  +  GA   G ++  KD   ++W+        R G G  +++   + L GH NS+              G  +  +GDW G +CLW +   E             +RK             +        P++ F+AHAQ V+G+        P+        S  +++S D +VK WD E Q+C+ TLN  K VT    S SG +L  GHPD R+RIWD R+    QG TL    +  ++S   W++GV W P  + ++ + SHDG +++WD+R+T PLH+ +AH  K  ALC G    +     I +GG DG V+ +
Sbjct:   15 KVRVKFVTKVPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTP----------FDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHAD-QPDWV-SAVAGAGAGLETFV-TGCYDGCLRVYGP-GCKVT--SLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWR--------RAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHADGDDAQGTKRRKTDTGAAAAAAAAVTE-----LTPLASFRAHAQAVTGLAGPGGVGRPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRT----QGETLT---RASLSSHKQWVTGVKWAPGSETMVLSCSHDGSVKLWDIRSTLPLHSAQAHRGK--ALCCGWQDGK-----IVSGGEDGAVKTY 457          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|1210530585|dbj|GAX10810.1| (ribosome biogenesis protein YTM1 [Fistulifera solaris])

HSP 1 Score: 204.527 bits (519), Expect = 1.129e-56
Identity = 151/480 (31.46%), Postives = 239/480 (49.79%), Query Frame = 0
Query:   14 RVRLRFFT----RDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGK------AAESEITRNKKTHRGYDFVI--ENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIG-HENSVECVAVRGKEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPKESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISS-GNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAH-EDKALALCFGRARDQLGMWAIFTGGTDGVVRRFE 478
            R+ L+  T    RD  + VS  P+AVPV + R+GLS +I+HL G+        E +   +K     +DF++   N+LLR  + +  R  G + E ++ + YF +  AP     S+    W+G+L A  G     MV AG +DGSL+         L  R + +H G IK ++++   A+  +S     G  ++     V+++Q             + T++ V++  G H  +V CV      Q+ SGDWGG + LW +D++     T      V K KK       D  + +  +     P    KAH+  +SG+ W+  + +  T SWDHS+K+W++E Q+C+ TLN S+VVT    S     L  GHPD  +R+WDVR+  E    +++    R   S  +W+S V W       L   SHDG ++ WD+R++ PLH++RA  ++K LAL    +       AI+ GGTD  V+R +
Sbjct:   17 RISLKLSTNCTQRD--LEVSSEPVAVPVDVTRKGLSAIINHLLGRKLVDPSEEEDDDDSSKLPSLNFDFILGSSNKLLRTSVGREARRQGHNFEQAITITYFPSQPAPEDQGESEPMPDWIGALSAVSG-----MVFAGCYDGSLQVLQEETMEPLVPR-VFSHTGAIKCVSSV---ARNDDSYYVATG--SMDHSLSVQLYQ-------------DQTLQQVASCTGGHNAAVSCVDFGNSSQLASGDWGGEVYLWNLDQDISEQAT------VKKVKK-------DKSNETACVVRYLTPTGSMKAHSSQISGIAWNSPDQM-ITGSWDHSIKVWNVERQDCLLTLNSSRVVTCLDASRVSAALATGHPDCTVRLWDVRTKSETSSWSVSDNTFR--PSHKAWVSAVQWFDAYQ--LVTTSHDGMVKWWDIRSSLPLHSVRAFSKNKGLALSATSS-------AIYVGGTDNRVKRLQ 445          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|669138224|ref|XP_008604680.1| (hypothetical protein SDRG_00952 [Saprolegnia diclina VS20] >gi|530743869|gb|EQC42111.1| hypothetical protein SDRG_00952 [Saprolegnia diclina VS20])

HSP 1 Score: 200.29 bits (508), Expect = 1.226e-55
Identity = 146/471 (31.00%), Postives = 230/471 (48.83%), Query Frame = 0
Query:   13 ARVRLRFFTRDPTIRVSEAPLAVPVSLNRRGLSEVIDHLRGKAAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGGEDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAVRGK-EQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRK-VVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKWHPKES-LAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFAISSGNLLGAGHPDGRLRIWDVRSVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRFETS 480
            A++R++F T++P IRV+E P AVP+ L R GLS+V++HL           N    + +DF+I++  LR  LEK++    ++ E+ +++EY      P +  SS++   W+ S VA  G      V  G +DG LR  +  G      +   AH   IK +A                 +VT  KDQ +K W+ L G           T+  +S  +GH NSV+ VA+  + E VLSG W   + +W    +E         TS  K+K  K     +   +A+  +PG          H   V  V +HP ES  A++++ D S+K+WDL  Q C QT++GS  ++  +++   ++   HPD  +R+WD R+   K G TL    ++   S   W+S V W  +   V A   +DG ++VWD R++ PL TL AH  KAL + +  A       A  +GG D  ++ + T+
Sbjct:    6 AQIRVKFVTKNPEIRVTETPFAVPIKLARAGLSQVVNHLL----------NTAEPKPFDFLIDDNFLRTSLEKYVVQHNLNDEAVLELEYVEAHLEP-EAKSSQNHPDWI-SAVATSGA----FVATGCYDGVLRVFTLAGAPVAQAK---AHDSVIKTVAM------------HGDLIVTGSKDQTLKTWK-LSGN----------TLTAISVGVGHLNSVDTVAIDAEAEFVLSGSWDNTVRVWSATADETD-------TSTKKQKTAKGTKTSLVTAEATLVLPG----------HTASVVAVAFHPTESHAAYSAAMDRSIKLWDLSLQMCKQTMSGSSTISDMSVNKDGMVLTAHPDTAIRLWDPRAA--KAGTTLV---QKTFQSHKMWVSAVEWASETQFVSAG--YDGTVKVWDSRSSIPLFTLAAHTGKALDVAWIAADKP----AFVSGGEDCQLKFYGTA 406          
BLAST of EWM22956.1 vs. NCBI_GenBank
Match: gi|224003351|ref|XP_002291347.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973123|gb|EED91454.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 201.83 bits (512), Expect = 2.155e-55
Identity = 148/486 (30.45%), Postives = 232/486 (47.74%), Query Frame = 0
Query:   25 TIRVSEAPLAVPVSLNRRGLSEVIDHLRGK------------AAESEITRNKKTHRGYDFVIENQLLRCPLEKFLRATGISTESSVDVEYFRTLQAPVQGSSSKSEAAWVGSLVACEGNGG--EDMVLAGAFDGSLRCHSARGCVELGGRWLHAHRGPIKAMAALEPGAQEQESGASERGVVTVGKDQVVKVWQVLVGGRGERKGGKEATVRPVSTLIGHENSVECVAV-----RGKEQVLSGDWGGVLCLWKIDKEERTPVTAPSFTSVHKRKKRKVVEGMDDEDASPPIPGIHAPVSLFKAHAQCVSGVKW----------HPKESLAFTSSWDHSVKIWDLEHQNCVQTLNGSKVVTSFA-ISSGNLLGAGHPDGRLRIWDVR---SVEEKQGMTLAAPGKRVMASCGSWISGVAWHPQRDNVLAAISHDGYLRVWDLRATKPLHTLRAHEDKALALCFGRARDQLGMWAIFTGGTDGVVRRF 477
            +I +   P+AVP S+ ++GLS V++HL  +               S   ++K     +DF++   LLR PLE  +R  G++TES++++ YF     P +    +    W+  +    G GG  + ++  G  DG +R   + G V      + AH GPI  ++A         +  +E+ +V  G        Q LV       G  +  +  V +  GH N++  +A+      GK  + SGDW G L LW +   +   V         K K+RK     D+    P I  +   +S+ KAH+  +SG+ W          +   S   T SWDH +K++D    +CV  LNGS+VVTS +   + N++G G PD  +R+WD+R   SV E  G   +   K +  S  +W+S V W P    VLA+ SHDG L++WD+R++ PLHT+ A +    ALC        G   I++GG+D VV +F
Sbjct:   40 SIEIPSEPIAVPSSIRKKGLSAVVNHLLDRKVADDDENEEDDDDSSSEEQDKLPSIPFDFLLSQSLLRLPLESAIRKEGLNTESAIELYYFPARLPPKKEGEGEVVPDWIMGMEFVNGVGGGSDGVLFTGGADGVVRSFQSNGGVLKSSTSIAAHTGPIHCISA---------ATVNEKCLVATGSMD-----QTLVTHTYNHDGSLD--LHAVYSG-GHANTISSMALLANGGDGKSIMASGDWDGGLSLWSVPSADGNGVDGGDDRDGKKSKRRKGNSSTDNT-THPSIQEVKPTISV-KAHSSNISGLAWGYNNTSSDSTNSTPSTLLTGSWDHGLKVYDTSRMDCVLALNGSRVVTSLSRCVNSNVVGTGGPDCTVRLWDMRSGGSVGESVG---SGADKTLRQSHKAWVSNVQWSPTDPFVLASTSHDGTLKIWDIRSSLPLHTVNAVKKGEKALCLA-----FGTEYIYSGGSDCVVNQF 498          
The following BLAST results are available for this feature:
BLAST of EWM22956.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103689|gb|EWM22956.1|0.000e+0100.00putative microtubule-associated protein [Nannochlo... [more]
gi|695442149|ref|XP_009533383.1|3.646e-6731.92hypothetical protein PHYSODRAFT_563571 [Phytophtho... [more]
gi|675178799|ref|XP_008898284.1|2.934e-6530.93hypothetical protein PPTG_06147 [Phytophthora para... [more]
gi|970633938|gb|KUF79381.1|1.316e-6430.93Ribosome biogenesis protein WDR12 [Phytophthora ni... [more]
gi|301107890|ref|XP_002903027.1|1.955e-6330.36conserved hypothetical protein [Phytophthora infes... [more]
gi|953494567|emb|CEG44161.1|9.951e-6130.59wd repeat domain-containing protein [Plasmopara ha... [more]
gi|299471418|emb|CBN79371.1|5.311e-6031.89conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210530585|dbj|GAX10810.1|1.129e-5631.46ribosome biogenesis protein YTM1 [Fistulifera sola... [more]
gi|669138224|ref|XP_008604680.1|1.226e-5531.00hypothetical protein SDRG_00952 [Saprolegnia dicli... [more]
gi|224003351|ref|XP_002291347.1|2.155e-5530.45predicted protein [Thalassiosira pseudonana CCMP13... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7734rna7734Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications