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Properties
| Property Name | Value |
|---|
| Product | Autophagy-related protein 17 |
| Orig transcript id | gnl|cribi|Naga_100102g4.80.mrna |
| Orig protein id | gnl|cribi|Naga_100102g4.80 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:178539..180682 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7726 ID=rna7726|Name=rna7726|organism=Nannochloropsis gaditana|type=mRNA|length=816bp
ATGTCCCCGGCGTCGTCAGCTACGGCGCCACCGGTAAAGCCACCGCTGCC
GCCTGAGATCGAGGACTTACACGCCTCAGCGGTGGCGCAGGGCCAGGAGA
CCTACACGGACCCCGCCACTGGCTACATGGTCATGACTGCGCTCTATCAC
AGGCGACGCGGCCACTGTTGCGGTAACATTTGTCGGCATTGCCCGTACGA
CTCAGTCAATGTGGGAAAAAAGAAGGTAGACTGGGTGATGAGCGACGGCA
GCAAATATACAGCCAAGAAGGCCGCCGCCTTAAGGAGGGCTGCGAAAGAC
CACGGGGCCAGCCCGTCGGCCGGAGAGGGCGATGACCACGGAGGCCACGG
CGGGGGGCAGGAAAATAGCGGCTCCGACCATAATTCAACAGTCCAAGTCC
TCACCGCGGATCTTGTTAAGGGCAGTGCAACTGCGAAGATGGGTCAAGAC
GATGCCGAAGGCATGGCAAATGTTGCGAATCCGCGCGAGACAGGGGTCTT
CGCCGTCAGACCAGCTGTTGTTACATCCGCTCTACCAGGTACAGGACCGT
TACCGGGCGCAAGCGGAGGCTGTGTCCTGGCAAGCCTTTTGATCATGCGG
CCAGGGCAACGGCTCATCGACAAAAGTGAACTGCGAGCTGTCGCACTACC
AGCAAAATCACCAAGCATGCCTTTTCTCCAGTCTGCTTTGCGGAGCTGCT
GGCTGCAACGTGCTTTCCGGCCGTTCATCGCTCCAAGTCGATGGTCAGGA
TCTTTTGGGAGCTTCGTGCTTGCATACATCACGTTGAGCGACCAAATAAA
TAAATGCCATAATTGA back to topprotein sequence of rna7726 >rna7726-protein ID=rna7726-protein|Name=rna7726|organism=Nannochloropsis gaditana|type=polypeptide|length=468bp
MEGLLTLLQDGDMCLTEARSSLLRSRELLDVFRHEAGRLLQRLSLLRAQV
RALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELV
AGERGHTLFDFLDEGAVTSLRAQAEADAREVCVLRERGLRAQASLEERLL
CLEQAIRAALEGAGMLPGRDGEEEEEEEGGEEVEEEGEEERVEATWLWRV
LAQNVRDQARAVAEMKAALVRAASAYARWRGEGGGKGADAASEGGAKDGK
ALGPCSPAKEEQELLRVLQSGMPRMRAWRRQMEEEVPALLHALRRALREL
VAGEMAEAARESHGLVEGLEEDQARLTSLRAEAQSSAREVESLAAFYSRF
ALAYAQLRPELERRRRVLRETAEVVKEVEAGLRSREEEEAAARERFWEAH
GRYLPQSLCPVVREPAESFRVVPSVEEARRRLSVLEAREEEGGGRGAEEG
YGEGMWDARAGRKGGKAV back to topmRNA from alignment at CM002473.1:178539..180682+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7726 ID=rna7726|Name=rna7726|organism=Nannochloropsis gaditana|type=mRNA|length=2144bp|location=Sequence derived from alignment at CM002473.1:178539..180682+ (Nannochloropsis gaditana)
GGGGACATGGGAAAAATTAAATACAGCGACCTGAACAATGAAGAAAATAT
ATGTTTCAAAGCGGCTCAAATCGCTGGATAATTTCATGTCCGAGGCGTGT
AGAATATGACACAGGTTCTCCGTGTCCGACGGCGTGCcaccggggagggg
agacgagggcgacAGCTCAAGTGCCCAGAGACAAGGCctcgtccgctccc
tccacaaGACGTAACAACCGCAAAAAAGAATTACTGACGATGACGACAAC
TAATTTTTCTGCAGAAGCCTATTCTGTCGGGGCAATTACTGCTCGGCGCA
CGCAGCTGATATTTTTTTCGTCTCCTTTATCAGCTCCCATGTCTTCAAGA
GGCCTCCGGGGCCCTCTACTCCTCTCCCATGCTTTTTTACTCCTGGACCT
TATCAAAGTCTGATGCAGTCGAAGCCACAGCGAGACAAATTTTTATAAAA
CAGAGAAAGCAGAGGAGCTGGCTTCCTTTTTGGGCATGGAGGGCCTGCTC
ACCTTGCTGCAGGACGGCGACATGTGTCTCACTGAAGCCCGGTCGTCTCT
CTTGCGGTCTCGCGAGCTACTGGACGTGTTCCGGCACGAAGGTACGGCAT
CTGGCTGTGTAGAGAGGTGAAGAGGACAAGCGAATATGACGATGGCAGGT
AAAATTAGACAAATGTGAATGTCCTACCAGTTTGCCCTGGCAAGGCTCGA
CCGCGCCTAGACGtaggcaggagaggaaacgCACCCCCCAAACCGACTGA
CCGTCCTACCCATGACAATATCCACCAGCcgggcgcctcctccaacgtct
ctccctcctgcgcgCCCAAGTCCGAGCCcttgcccgccttctccactgGG
TATGGGCCGCTAACAACAGCCTCGGGCCACTCGAGCGCCTTCCCCCGGAC
GACGCGCCCTTCCAGACCCTCGAAGCCGTCTGCGACCAGCTCCGGCAGAC
CCGTGTGGACCCGGAGCTGGtggcaggggagaggggtcaCACGCTCTTCG
ActtcctggacgagggcgcCGTCACCTCCCTGCGAGCTCAGGCGGAGGCC
gacgcgagggaggtgtGCGTCCTGCGGGAGAGGGGACTCCGCGCTCAGGC
GAGTTTGGAGGAGCGGCTGCTCTGTCTGGAGCAAGCCATTCGGGCCGCAc
tcgagggggcggggatgctgccggggagggacggggaggaagaggaggag
gaggagggaggggaagaggtggaggaggagggagaggaagagcgggtggA
GGCGACGTGGTTGTGGAGAGTGTTGGCGCAGAACGTGAGAGACCaggcca
gggcggtggcggagatgAAGGCAGCCCTCGTGCGGGCGGCCAGCGCCTAT
GCCCGGtggcgcggggaaggaggaggcaagggggccgACGCCGCttccga
gggcggggcaaaggatgggaaggcgCTTGGGCCCTGCTCGcccgccaagg
aggagcaagagctcCTGCGAGTGCTGCAGTCGGGGATGCCTCGAATGAGG
GCCTGGCGCaggcagatggaggaggaggtgcccgccctccttcacgccct
ccgTCGCGCCCTCCGTGAGCTCGTCGCGGGGGAGATGGCTGAGGCCGCGC
GCGAGTCCCacgggctggtggaggggctggaggaggaccaggcccgCTTA
ACCTCcctgagggcggaggcgcagAGCTCGGCGCGCGAGGTCGAGTCGCT
GGCGGCCTTCTACTCGCGCTTTGCCCTCGCCTACGCCCAGTTGCGGCCCG
AGCTGGAGCGTCGGCGGCGGGTGCTCCGGGAGACTGCCGAGGtcgtgaag
gaggtggaggctggTCTCCggtcgcgggaggaggaggaggcggcggcccg
ggagaggTTCTGGGAGGCACACGGGCGCTACCTGCCTCAgtccctctgcc
ccgtcGTCCGCGAGCCCGCCGAGAGCTTCAGGGTGGTGCccagcgtggag
gaggcgcggaggcggctgtcggtgctggaggcaagggaggaagagggggg
gggaaggggagctgAGGAGGGgtacggggagggaatgtgGGATGCGAGGG
Caggcagaaagggaggcaaggcagtgtaaagaaggaagatggggagaagc
agaagcATCActgtgaagaggaagacacaAGCACGCAGCCACGC back to topCoding sequence (CDS) from alignment at CM002473.1:178539..180682+ >rna7726 ID=rna7726|Name=rna7726|organism=Nannochloropsis gaditana|type=CDS|length=2814bp|location=Sequence derived from alignment at CM002473.1:178539..180682+ (Nannochloropsis gaditana)
ATGGAGGGCCTGCTCACCTTGCTGCAGGACGGCGACATGTGTCTCACTGA
AGCCCGGTCGTCTCTCTTGCGGTCTCGCGAGCTACTGGACGTGTTCCGGC
ACGAAGCcgggcgcctcctccaacgtctctccctcctgcgcgCCCAAGTC
CGAGCCcttgcccgccttctccactgGGTATGGGCCGCTAACAACAGCCT
CGGGCCACTCGAGCGCCTTCCCCCGGACGACGCGCCCTTCCAGACCCTCG
AAGCCGTCTGCGACCAGCTCCGGCAGACCCGTGTGGACCCGGAGCTGGtg
gcaggggagaggggtcaCACGCTCTTCGActtcctggacgagggcgcCGT
CACCTCCCTGCGAGCTCAGGCGGAGGCCgacgcgagggaggtgtGCGTCC
TGCGGGAGAGGGGACTCCGCGCTCAGGCGAGTTTGGAGGAGCGGCTGCTC
TGTCTGGAGCAAGCCATTCGGGCCGCActcgagggggcggggatgctgcc
ggggagggacggggaggaagaggaggaggaggagggaggggaagaggtgg
aggaggagggagaggaagagcgggtggAGGCGACGTGGTTGTGGAGAGTG
TTGGCGCAGAACGTGAGAGACCaggccagggcggtggcggagatgAAGGC
AGCCCTCGTGCGGGCGGCCAGCGCCTATGCCCGGtggcgcggggaaggag
gaggcaagggggccgACGCCGCttccgagggcggggcaaaggatgggaag
gcgCTTGGGCCCTGCTCGcccgccaaggaggagcaagagctcCTGCGAGT
GCTGCAGTCGGGGATGCCTCGAATGAGGGCCTGGCGCaggcagatggagg
aggaggtgcccgccctccttcacgccctccgTCGCGCCCTCCGTGAGCTC
GTCGCGGGGGAGATGGCTGAGGCCGCGCGCGAGTCCCacgggctggtgga
ggggctggaggaggaccaggcccgCTTAACCTCcctgagggcggaggcgc
agAGCTCGGCGCGCGAGGTCGAGTCGCTGGCGGCCTTCTACTCGCGCTTT
GCCCTCGCCTACGCCCAGTTGCGGCCCGAGCTGGAGCGTCGGCGGCGGGT
GCTCCGGGAGACTGCCGAGGtcgtgaaggaggtggaggctggTCTCCggt
cgcgggaggaggaggaggcggcggcccgggagaggTTCTGGGAGGCACAC
GGGCGCTACCTGCCTCAgtccctctgccccgtcGTCCGCGAGCCCGCCGA
GAGCTTCAGGGTGGTGCccagcgtggaggaggcgcggaggcggctgtcgg
tgctggaggcaagggaggaagagggggggggaaggggagctgAGGAGGGg
tacggggagggaatgtgGGATGCGAGGGCaggcagaaagggaggcaaggc
agtgtaaATGGAGGGCCTGCTCACCTTGCTGCAGGACGGCGACATGTGTC
TCACTGAAGCCCGGTCGTCTCTCTTGCGGTCTCGCGAGCTACTGGACGTG
TTCCGGCACGAAGCcgggcgcctcctccaacgtctctccctcctgcgcgC
CCAAGTCCGAGCCcttgcccgccttctccactgGGTATGGGCCGCTAACA
ACAGCCTCGGGCCACTCGAGCGCCTTCCCCCGGACGACGCGCCCTTCCAG
ACCCTCGAAGCCGTCTGCGACCAGCTCCGGCAGACCCGTGTGGACCCGGA
GCTGGtggcaggggagaggggtcaCACGCTCTTCGActtcctggacgagg
gcgcCGTCACCTCCCTGCGAGCTCAGGCGGAGGCCgacgcgagggaggtg
tGCGTCCTGCGGGAGAGGGGACTCCGCGCTCAGGCGAGTTTGGAGGAGCG
GCTGCTCTGTCTGGAGCAAGCCATTCGGGCCGCActcgagggggcgggga
tgctgccggggagggacggggaggaagaggaggaggaggagggaggggaa
gaggtggaggaggagggagaggaagagcgggtggAGGCGACGTGGTTGTG
GAGAGTGTTGGCGCAGAACGTGAGAGACCaggccagggcggtggcggaga
tgAAGGCAGCCCTCGTGCGGGCGGCCAGCGCCTATGCCCGGtggcgcggg
gaaggaggaggcaagggggccgACGCCGCttccgagggcggggcaaagga
tgggaaggcgCTTGGGCCCTGCTCGcccgccaaggaggagcaagagctcC
TGCGAGTGCTGCAGTCGGGGATGCCTCGAATGAGGGCCTGGCGCaggcag
atggaggaggaggtgcccgccctccttcacgccctccgTCGCGCCCTCCG
TGAGCTCGTCGCGGGGGAGATGGCTGAGGCCGCGCGCGAGTCCCacgggc
tggtggaggggctggaggaggaccaggcccgCTTAACCTCcctgagggcg
gaggcgcagAGCTCGGCGCGCGAGGTCGAGTCGCTGGCGGCCTTCTACTC
GCGCTTTGCCCTCGCCTACGCCCAGTTGCGGCCCGAGCTGGAGCGTCGGC
GGCGGGTGCTCCGGGAGACTGCCGAGGtcgtgaaggaggtggaggctggT
CTCCggtcgcgggaggaggaggaggcggcggcccgggagaggTTCTGGGA
GGCACACGGGCGCTACCTGCCTCAgtccctctgccccgtcGTCCGCGAGC
CCGCCGAGAGCTTCAGGGTGGTGCccagcgtggaggaggcgcggaggcgg
ctgtcggtgctggaggcaagggaggaagagggggggggaaggggagctgA
GGAGGGgtacggggagggaatgtgGGATGCGAGGGCaggcagaaagggag
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