EWM22969.1, cds7705 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22969.1 vs. NCBI_GenBank
Match: gi|585103702|gb|EWM22969.1| (Autophagy-related protein 17 [Nannochloropsis gaditana]) HSP 1 Score: 893.649 bits (2308), Expect = 0.000e+0 Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0 Query: 1 MEGLLTLLQDGDMCLTEARSSLLRSRELLDVFRHEAGRLLQRLSLLRAQVRALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELVAGERGHTLFDFLDEGAVTSLRAQAEADAREVCVLRERGLRAQASLEERLLCLEQAIRAALEGAGMLPGRDGEEEEEEEGGEEVEEEGEEERVEATWLWRVLAQNVRDQARAVAEMKAALVRAASAYARWRGEGGGKGADAASEGGAKDGKALGPCSPAKEEQELLRVLQSGMPRMRAWRRQMEEEVPALLHALRRALRELVAGEMAEAARESHGLVEGLEEDQARLTSLRAEAQSSAREVESLAAFYSRFALAYAQLRPELERRRRVLRETAEVVKEVEAGLRSREEEEAAARERFWEAHGRYLPQSLCPVVREPAESFRVVPSVEEARRRLSVLEAREEEGGGRGAEEGYGEGMWDARAGRKGGKAV 468 MEGLLTLLQDGDMCLTEARSSLLRSRELLDVFRHEAGRLLQRLSLLRAQVRALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELVAGERGHTLFDFLDEGAVTSLRAQAEADAREVCVLRERGLRAQASLEERLLCLEQAIRAALEGAGMLPGRDGEEEEEEEGGEEVEEEGEEERVEATWLWRVLAQNVRDQARAVAEMKAALVRAASAYARWRGEGGGKGADAASEGGAKDGKALGPCSPAKEEQELLRVLQSGMPRMRAWRRQMEEEVPALLHALRRALRELVAGEMAEAARESHGLVEGLEEDQARLTSLRAEAQSSAREVESLAAFYSRFALAYAQLRPELERRRRVLRETAEVVKEVEAGLRSREEEEAAARERFWEAHGRYLPQSLCPVVREPAESFRVVPSVEEARRRLSVLEAREEEGGGRGAEEGYGEGMWDARAGRKGGKAV Sbjct: 1 MEGLLTLLQDGDMCLTEARSSLLRSRELLDVFRHEAGRLLQRLSLLRAQVRALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELVAGERGHTLFDFLDEGAVTSLRAQAEADAREVCVLRERGLRAQASLEERLLCLEQAIRAALEGAGMLPGRDGEEEEEEEGGEEVEEEGEEERVEATWLWRVLAQNVRDQARAVAEMKAALVRAASAYARWRGEGGGKGADAASEGGAKDGKALGPCSPAKEEQELLRVLQSGMPRMRAWRRQMEEEVPALLHALRRALRELVAGEMAEAARESHGLVEGLEEDQARLTSLRAEAQSSAREVESLAAFYSRFALAYAQLRPELERRRRVLRETAEVVKEVEAGLRSREEEEAAARERFWEAHGRYLPQSLCPVVREPAESFRVVPSVEEARRRLSVLEAREEEGGGRGAEEGYGEGMWDARAGRKGGKAV 468
BLAST of EWM22969.1 vs. NCBI_GenBank
Match: gi|553181757|ref|XP_005853619.1| (hypothetical protein NGA_0449801 [Nannochloropsis gaditana CCMP526] >gi|422295446|gb|EKU22745.1| hypothetical protein NGA_0449801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 257.684 bits (657), Expect = 1.219e-81 Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0 Query: 1 MEGLLTLLQDGDMCLTEARSSLLRSRELLDVFRHEAGRLLQRLSLLRAQVRALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELVAGERGHTLFDFLDEGAVTSLRAQAEADAREV 131 ME LLTLLQDGDMCLTEARSSLLRSRELLDV RHEAGRLLQRLSLLRAQVRALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELVAGERGHTLFDFLDEGAVTSLRAQAEADAREV Sbjct: 1 MEDLLTLLQDGDMCLTEARSSLLRSRELLDVIRHEAGRLLQRLSLLRAQVRALARLLHWVWAANNSLGPLERLPPDDAPFQTLEAVCDQLRQTRVDPELVAGERGHTLFDFLDEGAVTSLRAQAEADAREV 131
BLAST of EWM22969.1 vs. NCBI_GenBank
Match: gi|470504354|ref|XP_004348454.1| (hypothetical protein ACA1_157210 [Acanthamoeba castellanii str. Neff] >gi|440800974|gb|ELR21999.1| hypothetical protein ACA1_157210 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 67.3958 bits (163), Expect = 2.379e-8 Identity = 44/152 (28.95%), Postives = 72/152 (47.37%), Query Frame = 0 Query: 272 MPRMRAWRRQMEEEVPALLHALRRALRELVAGEMAEAARESHGLVEGLEEDQARLTSLRAEAQSSAREVESLAAFYSRFALAYAQLRPELERRRRVLRETAEVVKEVEAGLRSREEEEAAARERFWEAHGRYLPQSLCPVVREPAESFRVVP 423 + R++ +Q+E+ +RA + V + + + +V ++E + R EA E+ +L +Y F AY +L E+ERR + E+V + L + E RE F+E +GRYLPQSLCP V E A + + P Sbjct: 301 LQRIQESTKQIEDRCQKYATTFQRATQ--VFAQFEQFGVDVQEVVHQIDEHERAFEERRGEAAFLFEELANLTTWYELFGTAYEELLVEVERRHNEHKRMQEIVLAYQKELNVWYQVETQKRENFFEFYGRYLPQSLCPSVMENAPRYEIYP 450
BLAST of EWM22969.1 vs. NCBI_GenBank
Match: gi|1022894451|ref|XP_016245468.1| (hypothetical protein PV07_08444 [Cladophialophora immunda] >gi|1022894453|ref|XP_016245469.1| hypothetical protein, variant [Cladophialophora immunda] >gi|759248585|gb|KIW25252.1| hypothetical protein PV07_08444 [Cladophialophora immunda] >gi|759248586|gb|KIW25253.1| hypothetical protein, variant [Cladophialophora immunda] >gi|1174598160|gb|OQV00306.1| hypothetical protein CLAIMM_05823 [Cladophialophora immunda]) HSP 1 Score: 62.3882 bits (150), Expect = 8.796e-7 Identity = 102/406 (25.12%), Postives = 155/406 (38.18%), Query Frame = 0 Query: 87 CDQLRQTRVDP--------ELVAGERGHTLFDFLDEGAVTSLRAQAEADAREVCVLRERGLRAQASLEERLLCLEQAIRAALEGAGMLPGRDGEEEEEEEGGEEVEEEGEEERVEATWLWRVLAQNVRDQARAVAEMKAALVRAAS--AYARWRGEGGGKGADAASEGG----AKDGKALG------PCSPAKEEQ--ELLRVLQSG---------------------MPRMRAWRRQMEEEVPALLHALRRALRELVAGEMAEAARESHGLVEGLEEDQARLTSLRAEAQSSAREVESLAAFYSRFALAYAQLRPELERRRRVLRETAEVVKEVEAGLRSREEEEAAARERFWEAHGRYLP-------QSLCP---VVREPAESFRVVP-----SVEEARRRLSV 434 D L+QTR++ EL AG TL DF+D+ V +++ E V + + +LE+ L Q++ L G G L G D E ++ T + L + D AR +AE +LV+ A EGGG+ G D +LG P P EE+ E+L+VL++ + ++ W + E + A + L E V+G ++ G V + + +A+ + +E L +Y+ F AY L E+ RRR V ++ VV E A L + + R F G YLP +L P +VR E VP +VEEA RRL V Sbjct: 130 IDLLKQTRIEDAFKPATEGELDAGPGKETLHDFVDDNGVETIKQAMEIAIDNVQNAQNEMGHSIQTLEDDL----QSVNEVLNGRGELSGTDSELQQ------------------PTTIAGTLTL-LEDHARIMAEELESLVKHFDLCVTAIKHTEGGGEALFQTMNAGEGVDLPDAVSLGMDELRAPAQPMNEEERLEMLQVLENDAQEVDEVVMELQDRHAEMEAQLDKIHQWCERQENAYADVATAFK--LLEKVSGRLS-------GYVAEIARQALKWNEEKAKIEDGIGGMEELCEYYANFLHAYDGLIVEVARRRTVKKQMERVVAEAHAQLEQMYDSDRELRLEFKNDLGEYLPSDIWSGVNTLPPRYSIVRADEEDVGSVPELPRRTVEEALRRLKV 503 The following BLAST results are available for this feature:
BLAST of EWM22969.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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