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Properties
| Property Name | Value |
|---|
| Product | Pyridoxal phosphate-dependent enzyme, beta subunit |
| Orig transcript id | gnl|cribi|Naga_100586g1.85.mrna |
| Orig protein id | gnl|cribi|Naga_100586g1.85 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:167152..167859 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7720 ID=rna7720|Name=rna7720|organism=Nannochloropsis gaditana|type=mRNA|length=1522bp
GGGGAAGGGAAGGAAAAGCCGAAAATCGGCAGAAGAGAGAAGAAGAGAGA
AATGAATGGAAGCCCCAACCACGGAGCGTAATGCGTCTGCTGAATAGTGT
CCGGAAAGTGTTGAAACGGCAGGCGGTAGCATGGCATGGAGGGCTCGCTT
GGGCATCTCCTCCTACCTTGTAGCAGGGCGTGCGAAGAATGCCGTTACGG
ATGCGGAACATAGCCGTGGACACGTCCTCGAAGGTGACGGGCGGGACATC
GTCGAAATGCGGCGTGGAGGACTGAAAGATGTGCGCGGAGCGGCAAGATG
AGGGAGGGTTCAGGGGGAGGGGTGAGGTCGTAGATGGTCGGGGTCGGACA
GATCCTGTCTCCCTTCTTCCCACGCACCTCGGCCGATGCGAAGCCTTGCG
CCGGCACATTACCAGAAAGTTTGGAGACAGCCGCAGGATGGGTGGTGGAG
AGAACGTAAGAAGGCCGCGCATTCGTGGCGGAAACGGTGCAAAGGGCATT
GTGGACGCCTCGTCCCAGGCGGGGGAAGCGGTTCAGCATTCTGCCCGAGG
TCGTATGTGTTCCGTGAGAAAGGCGGCTCTGATCCCACTCCCTGTCTGGC
AAATTGAAGGGATAATGACACGGGTGCCAGTGTCGGGCATCAGACATTGC
ATCTCCTTCCACGTGCAGGCGTCCGGAAATGGTGCTACAAGCCCTCAGGA
CTCGGCAAGAAATCTAGGAAAACGTGCACCTGCACCGAGGGCGGCATACA
AGATCGCGTGTCGCAGGTCGTGGGCGATGCGGCCCATGCTCACAGCGACT
TCACGGCGGGGTTAAAGGGAAGCACACGCGTGACACGCACCCGGTGAGAC
GCTGGCAGGTGTGGTTTACCAATAGCTGCACTTGTTTTTATATTTTTACA
AGGTTTTCACTCAGCGGCTTCCCGCGTCACAGTCCGAAACAGCCAACTTC
TCACTCTTCCCCCCCTTCCGTCTCCGGTCGAGGCCCCTCCGCACTCGCCT
TATCCCTTCTTTGAAAATCTCTTTCCATTCCTCCTTCTAAGAAGATCGTG
TTGGACACTACCGTTTCTAAACGCGCCCACAAATGCATGGCATTCTCCAG
GGACGCCCTGGCATCTAAATTACAGAGTTCCTGCTCCATGGGGCTGCGGG
GAAGTACGCCCTCGGGTCGATCGCGGTCTTGGCGGGGGGATGGAAATGAG
GAGGGGGAGTAGGAAAGAGATGAAGGGGCAGAGGCCGGGGCCGAAGCGAC
GCTTATCCTGCCACGCCCAGTCTCCTCCTTGTTAGCCCAGCCTGAGGCAG
CTCCAGCATTTTCGCCACAGTCGGCGGCCGCGCTTGTCGGCAGGTGAGCC
GCGGGACAAGACGCAGTCGTGGATGCAGGTGACGGGCTTCGGGCCAAGGC
TTCAAGCCGACGGATCTCCCCCTGCACAGCCTCGAGCAGGCGTCGGTGTG
GTCGGCCCAGGAGCATGAAGCTCTCTTCCTCAAGGAGCAGGCGGTCACGG
AGGAGGCACCGGGCCAGGCGCC back to topprotein sequence of rna7720 >rna7720-protein ID=rna7720-protein|Name=rna7720|organism=Nannochloropsis gaditana|type=polypeptide|length=162bp
MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITG
QHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDY
VIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVA
DVTRSQPRPPCR back to topmRNA from alignment at CM002473.1:167152..167859+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7720 ID=rna7720|Name=rna7720|organism=Nannochloropsis gaditana|type=mRNA|length=708bp|location=Sequence derived from alignment at CM002473.1:167152..167859+ (Nannochloropsis gaditana)
GAtggcggcctcggcgggcaaccacgccctcgccctctcctggCACGGGG
CACAGCTCGGCATCCCCGTCTCCGTCTTCATGCCCGTGgtcgcccccctc
gccaaGGTTGACAAATGCCGGaaatttggcgcgaacgTGATCATCACCGG
CCAGCACATCGGGGAGGCGAAGGTCGGTCCCCGCTTTGCCCCCACCGAGG
TGGTCCCGCCACTACTTGTAGTCACCTTAACGATCCCaacccctcctgct
cccccagGATTTCGCGCTCTCCAACCCCGAGTACGAGGGAGTGAAGTACA
TCAACGGCTACGACGACCCCGAGATCgtggccggggcggggaccaTCGGC
ATCGAAGTCCTCGAGCAAATCTCCAAggttccctcctccttcccctttcc
ccctcccttttctgcgtatccccccttccctgcctgcaTCGGTCGCCGCC
CTcaccccccgccccccctcccccattccctccctcccacccttcccccc
tccctgccgcagGTCGACTACGTGATCGTTCCCGTGGGCGGCGCGGGTCT
CCTTGCCGGCGTCTCGCTGGCCATCAAGACCCTGCGCCCCGAGTGCAAGG
TGATCGGGGTCGAGCCCAAGAACTGCCGCTCCTTTCAGTCCGCCCTCGAC
CACGGTCATCCTGTCGTCGCCGACGTTACCAGGTCTcagccccgccctcc
ctgccgcc back to topCoding sequence (CDS) from alignment at CM002473.1:167152..167859+ >rna7720 ID=rna7720|Name=rna7720|organism=Nannochloropsis gaditana|type=CDS|length=1461bp|location=Sequence derived from alignment at CM002473.1:167152..167859+ (Nannochloropsis gaditana)
AtggcggcctcggcgggcaaccacgccctcgccctctcctggCACGGGGC
ACAGCTCGGCATCCCCGTCTCCGTCTTCATGCCCGTGgtcgcccccctcg
ccaaGGTTGACAAATGCCGGaaatttggcgcgaacgTGATCATCACCGGC
CAGCACATCGGGGAGGCGAAGGATTTCGCGCTCTCCAACCCCGAGTACGA
GGGAGTGAAGTACATCAACGGCTACGACGACCCCGAGATCgtggccgggg
cggggaccaTCGGCATCGAAGTCCTCGAGCAAATCTCCAAgGTCGACTAC
GTGATCGTTCCCGTGGGCGGCGCGGGTCTCCTTGCCGGCGTCTCGCTGGC
CATCAAGACCCTGCGCCCCGAGTGCAAGGTGATCGGGGTCGAGCCCAAGA
ACTGCCGCTCCTTTCAGTCCGCCCTCGACCACGGTCATCCTGTCGTCGCC
GACGTTACCAGGTCTcagccccgccctccctgccgccAtggcggcctcgg
cgggcaaccacgccctcgccctctcctggCACGGGGCACAGCTCGGCATC
CCCGTCTCCGTCTTCATGCCCGTGgtcgcccccctcgccaaGGTTGACAA
ATGCCGGaaatttggcgcgaacgTGATCATCACCGGCCAGCACATCGGGG
AGGCGAAGGATTTCGCGCTCTCCAACCCCGAGTACGAGGGAGTGAAGTAC
ATCAACGGCTACGACGACCCCGAGATCgtggccggggcggggaccaTCGG
CATCGAAGTCCTCGAGCAAATCTCCAAgGTCGACTACGTGATCGTTCCCG
TGGGCGGCGCGGGTCTCCTTGCCGGCGTCTCGCTGGCCATCAAGACCCTG
CGCCCCGAGTGCAAGGTGATCGGGGTCGAGCCCAAGAACTGCCGCTCCTT
TCAGTCCGCCCTCGACCACGGTCATCCTGTCGTCGCCGACGTTACCAGGT
CTcagccccgccctccctgccgccAtggcggcctcggcgggcaaccacgc
cctcgccctctcctggCACGGGGCACAGCTCGGCATCCCCGTCTCCGTCT
TCATGCCCGTGgtcgcccccctcgccaaGGTTGACAAATGCCGGaaattt
ggcgcgaacgTGATCATCACCGGCCAGCACATCGGGGAGGCGAAGGATTT
CGCGCTCTCCAACCCCGAGTACGAGGGAGTGAAGTACATCAACGGCTACG
ACGACCCCGAGATCgtggccggggcggggaccaTCGGCATCGAAGTCCTC
GAGCAAATCTCCAAgGTCGACTACGTGATCGTTCCCGTGGGCGGCGCGGG
TCTCCTTGCCGGCGTCTCGCTGGCCATCAAGACCCTGCGCCCCGAGTGCA
AGGTGATCGGGGTCGAGCCCAAGAACTGCCGCTCCTTTCAGTCCGCCCTC
GACCACGGTCATCCTGTCGTCGCCGACGTTACCAGGTCTcagccccgccc
tccctgccgcc back to top
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