EWM22975.1, cds7699 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|585103712|gb|EWM22975.1| (Pyridoxal phosphate-dependent enzyme, beta subunit, partial [Nannochloropsis gaditana]) HSP 1 Score: 330.487 bits (846), Expect = 1.196e-114 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVTRSQPRPPCR 162
MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVTRSQPRPPCR
Sbjct: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVTRSQPRPPCR 162
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|299470275|emb|CBN79579.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 214.927 bits (546), Expect = 7.344e-65 Identity = 101/153 (66.01%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVT 153
+AASAGNHALAL+WHG QLGIPV+V MP +APL KV+KC+ FG NV+ GQHI EAKD A S P+++G++YINGYDD EIVAGAGT+G+E+LEQ+ VDY++VPVGGAGL+AG++LA KTL+PE KV+GVEP C S +AL G PV A+ T
Sbjct: 144 IAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEILEQVPDVDYIVVPVGGAGLIAGIALATKTLQPEVKVLGVEPHFCPSLTAALKAGKPVHAETT 296
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|676380175|ref|XP_009033366.1| (hypothetical protein AURANDRAFT_20121 [Aureococcus anophagefferens] >gi|323456445|gb|EGB12312.1| hypothetical protein AURANDRAFT_20121 [Aureococcus anophagefferens]) HSP 1 Score: 192.2 bits (487), Expect = 1.774e-56 Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQI---SKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHP 147
+AASAGNHALALSWHG QLG+PVSV MP VAP+AK KC FGA++++ G IG+AK A + + + Y+NGYDD I+AGAGT+G+E++EQ+ DYV+VP GGAGLLAGVSLAIKTLRP+ +V+GVEP+NC SF AL GHP
Sbjct: 78 VAASAGNHALALSWHGKQLGVPVSVLMPTVAPMAKRSKCATFGAHIVVHGDTIGDAKLHAETTAPFCDMTYVNGYDDVPIIAGAGTLGLELIEQLPEGDHFDYVMVPCGGAGLLAGVSLAIKTLRPQTRVVGVEPRNCASFSHALAVGHP 227
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|926624959|ref|XP_013777957.1| (PREDICTED: L-threonine ammonia-lyase-like [Limulus polyphemus]) HSP 1 Score: 188.348 bits (477), Expect = 3.547e-55 Identity = 84/148 (56.76%), Postives = 119/148 (80.41%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPV 148
+AASAGNHALALS+HG +LGIPV+V MP++AP+ K+ CR+FGA +II G IGE+K+ A+ + G+ Y+NGYD P I+AG GT+G+E+++Q+ +D V+VP+GG GL+AGV+LA+K+L+PE KVIGVE + C SF +A++ GHPV
Sbjct: 89 IAASAGNHALALSYHGQKLGIPVTVVMPIIAPIMKITMCRQFGAKIIIKGADIGESKEHAMQLSKENGLVYVNGYDHPHIIAGQGTMGLEIIDQVPDLDAVVVPIGGGGLIAGVALAVKSLKPEVKVIGVESERCPSFTAAMNAGHPV 236
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|219116154|ref|XP_002178872.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409639|gb|EEC49570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 187.193 bits (474), Expect = 2.710e-54 Identity = 99/153 (64.71%), Postives = 123/153 (80.39%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVT 153
+AASAGNHA AL++HG LG+P +V MP VAPLAKVDKCRKFGA VII G HIGEAK+FA + EG++Y+NGYDDP I+AGAGTIG+E+++ + VD V+VP+GGAGL+AG+S AIKTL+P+ KVIGVEPK C S+ +AL G PV A T
Sbjct: 143 IAASAGNHAQALAYHGRSLGVPATVVMPTVAPLAKVDKCRKFGARVIIKGSHIGEAKEFAETLVASEGLEYVNGYDDPPILAGAGTIGMEMIDDVPDVDVVVVPIGGAGLIAGISCAIKTLKPDTKVIGVEPKFCASYTAALRAGKPVPAPFT 295
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|514686032|ref|XP_004990594.1| (hypothetical protein PTSG_12710 [Salpingoeca rosetta] >gi|326431680|gb|EGD77250.1| hypothetical protein PTSG_12710 [Salpingoeca rosetta]) HSP 1 Score: 186.808 bits (473), Expect = 4.832e-54 Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVTRS 155
+AASAGNHAL L++HG LGIPV++ MPV APL KV+ CR FGANVII+G HIGE+ A E +G++YINGY+D I+AG GT G+E+LEQ+ VD +IVPVGG GL+AGVSLA+KT++ ++IGVE C SF A+ GHPV +VT +
Sbjct: 148 IAASAGNHALGLAYHGQDLGIPVTLVMPVFAPLTKVENCRSFGANVIISGAHIGESMVVAKEIAEKQGLQYINGYNDAAIIAGQGTAGLEILEQVPDVDAIIVPVGGGGLIAGVSLAVKTIQKNVQIIGVESVACPSFSEAMKAGHPVPVEVTST 302
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|1210514784|dbj|GAX26263.1| (threonine dehydratase [Fistulifera solaris]) HSP 1 Score: 185.652 bits (470), Expect = 8.448e-54 Identity = 99/153 (64.71%), Postives = 123/153 (80.39%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVT 153
+AASAGNHALAL++HG +LG+PV+V MP VAP+AKVDKCRKFGA +II GQHIG+AK++A E E + YINGYDDP I+AGAGTIG+E++ + VD V+VPVGGAGL+AG+S AIKTL+P KVIGVEP+ C S+ +AL G PV A T
Sbjct: 121 IAASAGNHALALAYHGKELGVPVTVVMPSVAPMAKVDKCRKFGARIIIEGQHIGQAKEYAEMLVEKEDLHYINGYDDPPILAGAGTIGMEIMNDVPCVDVVVVPVGGAGLIAGISCAIKTLKPCVKVIGVEPEFCASYTAALKAGRPVPAPFT 273
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|470300956|ref|XP_004347057.1| (threonine dehydratase [Capsaspora owczarzaki ATCC 30864] >gi|765554169|gb|KJE94790.1| threonine dehydratase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 185.267 bits (469), Expect = 9.398e-54 Identity = 87/148 (58.78%), Postives = 114/148 (77.03%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPV 148
+AASAGNHALAL++HG L IPV+V MP+ APL KV KC+ FGA VII G+HIGE+KD A+ + + Y+NGYD P I+AG GT+G+E+L ++ +D V+VP+GGAGL+AGV+LAIKT+RPE VIGVEP+ S+ +AL G PV
Sbjct: 114 IAASAGNHALALAYHGNDLKIPVTVVMPIHAPLMKVAKCKNFGATVIIKGEHIGESKDVAMQIAKAHNLTYVNGYDHPHIIAGQGTMGVEILNEMENIDAVVVPIGGAGLIAGVALAIKTIRPEVMVIGVEPERAASYTAALKAGKPV 261
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|1210511652|dbj|GAX29466.1| (threonine dehydratase [Fistulifera solaris]) HSP 1 Score: 184.882 bits (468), Expect = 1.585e-53 Identity = 99/153 (64.71%), Postives = 123/153 (80.39%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADVT 153
+AASAGNHALAL++HG +LG+PV+V MP VAP+AKVDKCRKFGA +II GQHIG+AK++A E E + YINGYDDP I+AGAGTIG+E++ + VD V+VPVGGAGL+AG+S AIKTL+P KVIGVEP+ C S+ +AL G PV A T
Sbjct: 123 IAASAGNHALALAYHGKELGVPVTVVMPSVAPMAKVDKCRKFGARIIIEGQHIGQAKEYAEMLVEKEDLHYINGYDDPPILAGAGTIGMEIMNDVPCVDVVVVPVGGAGLIAGISCAIKTLKPCVKVIGVEPEFCASYTAALRAGKPVPAPFT 275
BLAST of EWM22975.1 vs. NCBI_GenBank
Match: gi|560121766|emb|CDJ93619.1| (Pyridoxal phosphate-dependent enzyme and Amino acid-binding ACT domain containing protein [Haemonchus contortus]) HSP 1 Score: 185.267 bits (469), Expect = 1.787e-53 Identity = 87/152 (57.24%), Postives = 115/152 (75.66%), Query Frame = 0
Query: 1 MAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQSALDHGHPVVADV 152
+AASAGNHALAL +HG QL IPV+V MPV APL K+ CR FGA +I+ G IG AKD A+ + + KYINGYD P I+AGAGTIG+E+LEQ+ VD +++PVGGAGL+AG+++A+K L+P+ ++IGVE C SFQ+AL G PV ++
Sbjct: 146 IAASAGNHALALCYHGQQLNIPVTVVMPVFAPLMKIGMCRSFGATIILKGDDIGMAKDHAMRLVKEKKYKYINGYDHPNILAGAGTIGLEILEQVPDVDAILIPVGGAGLIAGIAVAVKKLKPQVEIIGVESDTCPSFQAALKAGKPVKVNI 297 The following BLAST results are available for this feature:
BLAST of EWM22975.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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