rna7707, rna7707 (mRNA) Nannochloropsis gaditana

Overview
Namerna7707
Unique Namerna7707
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length720
Alignment locationCM002473.1:136291..137773 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101129g2.1202.mrna
Orig protein idgnl|cribi|Naga_101129g2.1202
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:136291..137773 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101129g2gene7461Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7707rna7707-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22988.1cds7686Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7707 ID=rna7707|Name=rna7707|organism=Nannochloropsis gaditana|type=mRNA|length=720bp
ATGGACGAAAGCACTTTTCTGCAGCTCTTCCAGCAGGAAGGAGGTGAGGA
TGGCATACCCGACTCTTTCCTGTTTGCAGCTGCGCATGCGGCCGATCATC
AAGCTCTGATAGGTCTCCTCAACTCCCTTGCTGCCGATGGCCTGTTGGAA
CTCACCTCCCGGGCCAGCACGTTCCTCGAACTCACTGAGGAAGGGAAGAA
AGTGCTTGCCGACGGTTCCCCCGAAGCCAAGGTGTTCGCTGCCATCAGTC
CTACAGGGGAGGGCACTACTCAGGAGGCACTCTTGAAGGCCTTGGGAAAG
GACTGCGTCAAGATCGGCATGGGGCCTTTGATGAAAGCCAAAGCGGTCCG
AAAGGAAGGCGATAAACTCGTGCGGGCCGTGCCTGAATTCCAGGACGGGA
CTCAAGCCGTATTGCGGCAAGTGACGGGCCAGGAAGGGAAGGAAGGACAG
GCTCAAGGCCTGTCGGAGGAGGTGGTCAAGACGCTGCGGAAGCGGCAGCT
CGTCACGCAGGTCACTCGAAAATCGTTTTCCGTCCACCCTTGGCGCCCCC
GTCCAGGGCGGTTATTTCCATCCCTTGTTGAAAGTCCGTGCTCAGTTCCG
CCAGATCCTGCTGGCCATGGGCTTCACGGAGATGCCGACGAACAAGTGGG
TCGAGTCTTCCTTCTGGAACTTCGACGCCCTCTTCCAGCCCCAGTCCCAC
CCGGCGCGGGACGCTCATGA
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protein sequence of rna7707

>rna7707-protein ID=rna7707-protein|Name=rna7707|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLS
SCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFWH
RQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQ
FVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGR
YPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVAL
AFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEML
TQFSLEDGEFF
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mRNA from alignment at CM002473.1:136291..137773-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7707 ID=rna7707|Name=rna7707|organism=Nannochloropsis gaditana|type=mRNA|length=1483bp|location=Sequence derived from alignment at CM002473.1:136291..137773- (Nannochloropsis gaditana)
CCCCAGAGATCACCCCCGCCATGCACCGGTTCCCCCGCCGCTCCATCCTC
CTGATCGCCCTCCTCGACACGCTCTCCCTGGTCGTGATGGTGGTGGCGGG
CGCCTCCACACCCCCCGTCCTCACTGTCCTCTTCATGCAGGCCACCCTCC
CTTTCCTCCTCCTCCTCTCCTCCTGCCCGCCTTCCTTCCCCACCTGCTTT
GCCACTGCCAAGCGCCGGGAACAGAAGCGCTTTCATCGCGCGCACTGGCA
GGGGGGGGGATTGATCCTCCTAGGCATTGGTGTCGCGATGGCCCCCACCG
TGCACGTTGCCTTTTGGCACCGACAGACTGACATAGGTGGGGAGGAGGGG
CGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGTCTGGTCTTGTGCAAGTC
CATTGTCCGATAGGCGGCAGATAGACGCACAGACACGGACACAACATATA
TAGACGTATATATGTATAGATGTATATGTATCTGTTTATCAATTCATGAT
TTTCCCCACACATACACACACGCATCCAGGCATCAACACCCTCGCCTACG
TGCTCTGCTGCCTGCCCGCCGCTGTCTCCCAACTGGCGAAGGAACAAGCC
ATCATCGAGTTTGCACAACCCATTAATTTTTACTACTTGAATCTCCTCCT
GGGAATATACCAGTTCGTCCTCCTGCTGGTGCTGTCCCCCCTGACGTACC
GGCTCCAGGTGGGGAGGGAGGGAGGGATGGAGGGAGGGAGAGGGGACGGA
ACCAGTCAGAAAATCTCGTTTGGTCTTGCCTCGTCACGTCTGTGCGGACC
TAGAGCCTGGCCTTTTCCACCCTATTTCCAAACCCCTCCCACTGTCTGTA
AACTGGGAGGCTGAGGCCTTTTCCCTCATGCTTCCCATTGTCTCCCACTC
TTTGTGGACCGGGAGGCAGCCTCTGATTCCCTCGCGTCTCCCCCCCATTC
CAGGGGCTGGGAATGGGCTGGGACCCGTACGGGGCTACTGATCTGGGCAC
GGCCGTCTCGGACCTGTGTTTGTGCCTCTTCACCGCCCGCAGCATTCCTC
CAGGGCGCTATCCGATCGAGCCAGAGTGTCGGTACGCCTCTTTAGCCACA
TTTTTGTACATACTCTGCACCCTGCTGGTCACCTTTGCGGTCAACGGCGT
GCTCGCCTCGGGGACCCCTCAAATGCTCTATCGGACCATCAATGGGTCGG
TTGCCCTGGCTTTTCTGGCCCTGGCCGTGTATTCCGTGAATAAATGGGCG
TGGGTTTCCTCCTATGCTCTCAATGTCTTCGATTTCATTGGCCTCTTTTT
GGTCCTGGCAGGCATGGAGTGGTACCACAGTCAGCCCGAGCCCGACACGG
AGATGCTCACGCAGTTTTCGCTGGAGGATGGGGAATTTTTCTAGAAAGTC
GAGAAGACCTTCGAGGACGCCGCTCCTCCGGCTATGCCCTGATAATGCAT
ACAAAGAACAAAGTTTGTGGACTGGAAAAAGGC
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Coding sequence (CDS) from alignment at CM002473.1:136291..137773-

>rna7707 ID=rna7707|Name=rna7707|organism=Nannochloropsis gaditana|type=CDS|length=2808bp|location=Sequence derived from alignment at CM002473.1:136291..137773- (Nannochloropsis gaditana)
GGGCTGGGAATGGGCTGGGACCCGTACGGGGCTACTGATCTGGGCACGGC
CGTCTCGGACCTGTGTTTGTGCCTCTTCACCGCCCGCAGCATTCCTCCAG
GGCGCTATCCGATCGAGCCAGAGTGTCGGTACGCCTCTTTAGCCACATTT
TTGTACATACTCTGCACCCTGCTGGTCACCTTTGCGGTCAACGGCGTGCT
CGCCTCGGGGACCCCTCAAATGCTCTATCGGACCATCAATGGGTCGGTTG
CCCTGGCTTTTCTGGCCCTGGCCGTGTATTCCGTGAATAAATGGGCGTGG
GTTTCCTCCTATGCTCTCAATGTCTTCGATTTCATTGGCCTCTTTTTGGT
CCTGGCAGGCATGGAGTGGTACCACAGTCAGCCCGAGCCCGACACGGAGA
TGCTCACGCAGTTTTCGCTGGAGGATGGGGAATTTTTCTAGGCATCAACA
CCCTCGCCTACGTGCTCTGCTGCCTGCCCGCCGCTGTCTCCCAACTGGCG
AAGGAACAAGCCATCATCGAGTTTGCACAACCCATTAATTTTTACTACTT
GAATCTCCTCCTGGGAATATACCAGTTCGTCCTCCTGCTGGTGCTGTCCC
CCCTGACGTACCGGCTCCAGATGCACCGGTTCCCCCGCCGCTCCATCCTC
CTGATCGCCCTCCTCGACACGCTCTCCCTGGTCGTGATGGTGGTGGCGGG
CGCCTCCACACCCCCCGTCCTCACTGTCCTCTTCATGCAGGCCACCCTCC
CTTTCCTCCTCCTCCTCTCCTCCTGCCCGCCTTCCTTCCCCACCTGCTTT
GCCACTGCCAAGCGCCGGGAACAGAAGCGCTTTCATCGCGCGCACTGGCA
GGGGGGGGGATTGATCCTCCTAGGCATTGGTGTCGCGATGGCCCCCACCG
TGCACGTTGCCTTTTGGCACCGACAGACTGACATAGGGGCTGGGAATGGG
CTGGGACCCGTACGGGGCTACTGATCTGGGCACGGCCGTCTCGGACCTGT
GTTTGTGCCTCTTCACCGCCCGCAGCATTCCTCCAGGGCGCTATCCGATC
GAGCCAGAGTGTCGGTACGCCTCTTTAGCCACATTTTTGTACATACTCTG
CACCCTGCTGGTCACCTTTGCGGTCAACGGCGTGCTCGCCTCGGGGACCC
CTCAAATGCTCTATCGGACCATCAATGGGTCGGTTGCCCTGGCTTTTCTG
GCCCTGGCCGTGTATTCCGTGAATAAATGGGCGTGGGTTTCCTCCTATGC
TCTCAATGTCTTCGATTTCATTGGCCTCTTTTTGGTCCTGGCAGGCATGG
AGTGGTACCACAGTCAGCCCGAGCCCGACACGGAGATGCTCACGCAGTTT
TCGCTGGAGGATGGGGAATTTTTCTAGGCATCAACACCCTCGCCTACGTG
CTCTGCTGCCTGCCCGCCGCTGTCTCCCAACTGGCGAAGGAACAAGCCAT
CATCGAGTTTGCACAACCCATTAATTTTTACTACTTGAATCTCCTCCTGG
GAATATACCAGTTCGTCCTCCTGCTGGTGCTGTCCCCCCTGACGTACCGG
CTCCAGATGCACCGGTTCCCCCGCCGCTCCATCCTCCTGATCGCCCTCCT
CGACACGCTCTCCCTGGTCGTGATGGTGGTGGCGGGCGCCTCCACACCCC
CCGTCCTCACTGTCCTCTTCATGCAGGCCACCCTCCCTTTCCTCCTCCTC
CTCTCCTCCTGCCCGCCTTCCTTCCCCACCTGCTTTGCCACTGCCAAGCG
CCGGGAACAGAAGCGCTTTCATCGCGCGCACTGGCAGGGGGGGGGATTGA
TCCTCCTAGGCATTGGTGTCGCGATGGCCCCCACCGTGCACGTTGCCTTT
TGGCACCGACAGACTGACATAGGGGCTGGGAATGGGCTGGGACCCGTACG
GGGCTACTGATCTGGGCACGGCCGTCTCGGACCTGTGTTTGTGCCTCTTC
ACCGCCCGCAGCATTCCTCCAGGGCGCTATCCGATCGAGCCAGAGTGTCG
GTACGCCTCTTTAGCCACATTTTTGTACATACTCTGCACCCTGCTGGTCA
CCTTTGCGGTCAACGGCGTGCTCGCCTCGGGGACCCCTCAAATGCTCTAT
CGGACCATCAATGGGTCGGTTGCCCTGGCTTTTCTGGCCCTGGCCGTGTA
TTCCGTGAATAAATGGGCGTGGGTTTCCTCCTATGCTCTCAATGTCTTCG
ATTTCATTGGCCTCTTTTTGGTCCTGGCAGGCATGGAGTGGTACCACAGT
CAGCCCGAGCCCGACACGGAGATGCTCACGCAGTTTTCGCTGGAGGATGG
GGAATTTTTCTAGGCATCAACACCCTCGCCTACGTGCTCTGCTGCCTGCC
CGCCGCTGTCTCCCAACTGGCGAAGGAACAAGCCATCATCGAGTTTGCAC
AACCCATTAATTTTTACTACTTGAATCTCCTCCTGGGAATATACCAGTTC
GTCCTCCTGCTGGTGCTGTCCCCCCTGACGTACCGGCTCCAGATGCACCG
GTTCCCCCGCCGCTCCATCCTCCTGATCGCCCTCCTCGACACGCTCTCCC
TGGTCGTGATGGTGGTGGCGGGCGCCTCCACACCCCCCGTCCTCACTGTC
CTCTTCATGCAGGCCACCCTCCCTTTCCTCCTCCTCCTCTCCTCCTGCCC
GCCTTCCTTCCCCACCTGCTTTGCCACTGCCAAGCGCCGGGAACAGAAGC
GCTTTCATCGCGCGCACTGGCAGGGGGGGGGATTGATCCTCCTAGGCATT
GGTGTCGCGATGGCCCCCACCGTGCACGTTGCCTTTTGGCACCGACAGAC
TGACATAG
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Synonyms
Publications