EWM22988.1, cds7686 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|585103737|gb|EWM22988.1| (hypothetical protein Naga_101129g2 [Nannochloropsis gaditana]) HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 1 MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFWHRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF 311
MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFWHRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF
Sbjct: 1 MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFWHRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF 311
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|553185531|ref|XP_005854262.1| (hypothetical protein NGA_0180900 [Nannochloropsis gaditana CCMP526] >gi|422294797|gb|EKU22097.1| hypothetical protein NGA_0180900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 296.975 bits (759), Expect = 4.063e-99 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query: 169 MGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF 311
MGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF
Sbjct: 1 MGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF 143
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|299472495|emb|CBN77280.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 134.035 bits (336), Expect = 8.534e-33 Identity = 103/323 (31.89%), Postives = 152/323 (47.06%), Query Frame = 0
Query: 1 MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAM----------APTVHVAFWHRQTD--------------IGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPP-GRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLY-RTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDT 297
M FP + ++A+LD L LV M+VA A P LTVL +Q + PF C A + +R+ R G +I LG VA+ T+H + D G NT+ YVL CLPAAVS + K+ A+ + +P++ + L+L + ++ V + + +P Y+LQ LG D G T +G A+ D CL R + YP++ EC F Y++ TLLV V V+ +Y R + SV AF+AL Y+ +W S NVF GL +++ G+ YHS PEP+
Sbjct: 54 MQGFPVWRLAMMAVLDMLHLVPMIVAAADVAPTLTVLLLQCSAPF-------------CLAVSGGFCSRRYPRKSVLGAAVIFLGACVAIYLPISRLINARATLHDDARSHEYDPVHLRGDSGDYAIVEGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQFLGRHGD--GNTHVGQALRDGWRCLVLMRDVVDIDGYPVDAECWAGLPLVFSYVVATLLVNTLVQKVVDQAESASVYHRAMAFSVPTAFVALCFYNEAEWLHDS---FNVFTVSGLIVIMIGLRLYHSVPEPED 358
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|1210530939|dbj|GAX10479.1| (hypothetical protein FisN_21Lh177 [Fistulifera solaris]) HSP 1 Score: 110.923 bits (276), Expect = 1.098e-23 Identity = 64/207 (30.92%), Postives = 107/207 (51.69%), Query Frame = 0
Query: 103 TDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWD---PYGATDLGTAVSDLCLCLFT--ARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFS 304
T INTL YV C+PAA+ L KE ++F QP+N YLNLLL +QF++ V+SPL + LQGLG D Y +T SD C + + +YP C Y+ L +++ +LV AV+ ++ +G +++YR ++ + ++ L + Y +N + ++ + L L++ G E YH D+ T+++
Sbjct: 318 TRTAINTLLYVSSCIPAAIVTLYKEHVFLQFKQPVNMNYLNLLLATFQFIVASVMSPLLFVLQGLGAHGDWTEQYPSTQFSENYSDGVQCFVGGLSETDQESKYPESAFCDYSLLLVLIHVTSVVLVGVAVDKIVNAGATKVMYRGVSAGIIVSVLCMHFYDMNIPDFNYGPVIDGLNLFCLILLILGSEVYHRVTLQDSTFETEYA 524
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|1210524476|dbj|GAX16734.1| (hypothetical protein FisN_21Hh177 [Fistulifera solaris]) HSP 1 Score: 109.768 bits (273), Expect = 2.785e-23 Identity = 65/208 (31.25%), Postives = 108/208 (51.92%), Query Frame = 0
Query: 103 TDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWD---PYGATDLGTAVSDLCLCLFTAR---SIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFS 304
T INTL YV C+PAA+ L KE +++ QP+N YLNLLL +QF++ V+SPL + LQGLG D Y +T SD C F R + +YP C Y+ L +++ +LV AV+ ++ +G +++YR ++ + ++ L + Y +N + ++ + L L++ G E YH D+ T+++
Sbjct: 318 TRTAINTLLYVSSCVPAAIVTLYKEHVFLQYKQPVNMNYLNLLLATFQFIVASVMSPLLFVLQGLGAHGDWTEQYPSTQFSENYSDGVRC-FVGRLSETDQESKYPESAFCDYSLLLVIIHVTSVVLVGVAVDKIVNAGATKVMYRGVSAGIIVSVLCMHFYDMNIPDFNYGPVIDGLNLFCLILLILGSEVYHRVTLQDSTFETEYA 524
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|669142452|ref|XP_008606788.1| (hypothetical protein SDRG_02955 [Saprolegnia diclina VS20] >gi|530741274|gb|EQC39516.1| hypothetical protein SDRG_02955 [Saprolegnia diclina VS20]) HSP 1 Score: 97.4413 bits (241), Expect = 2.407e-19 Identity = 78/306 (25.49%), Postives = 143/306 (46.73%), Query Frame = 0
Query: 3 RFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFW--HRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLE 306
FP+ ++ +LD +++ + G TP LTV+F+QA++P +L A+ + + + H GG +++ GI V + P + + + ++ N+L Y+L +P A+S L KE+A+ QP++ YYLN + +YQF+ L+++PL + + L + G L VS++ R+ +C L+++C ++ F V VL + +LY ++ +AF+ L Y ++ +SS + F +VL G+ Y PEP E T + E
Sbjct: 92 EFPKSKFFVMGMLDLAQSMLLFLPGGKTPATLTVIFLQASVPATMLF-------------AQILLKDEYSKFHVLGGSIMMAGILVGLLPVFSMVLSDVYEEQEMAWNSLCYLLAAIPGALSVLYKEKALA--TQPMDVYYLNAWVAVYQFIGGLLVAPLAFDIPALHLDQRISGLECLVNGVSEI-------RT---------DKCHLGLGLLLLFLVCKVVAFFGVGFVLQHTSVSVLYSGYTAALPMAFVLLEWYQQDQDGPLSSVWSDAF---SCAVVLLGLVLYRLNPEPGMEATTMSAAE 363
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|673045271|ref|XP_008876596.1| (hypothetical protein H310_11639 [Aphanomyces invadans] >gi|574467629|gb|ETV94651.1| hypothetical protein H310_11639 [Aphanomyces invadans]) HSP 1 Score: 93.2041 bits (230), Expect = 8.577e-18 Identity = 78/309 (25.24%), Postives = 142/309 (45.95%), Query Frame = 0
Query: 1 MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLG--IGVAMAPTVHVAFWHRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVF-DFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLE 306
++ FP+ ++A+LD L +++ + +TPP LTV+F+QAT+PF +L S+ ++ R GG L+ G +G+ + + + ++G ++L Y+L +P A+S L KEQA+ QP++ YYLN + +YQF+ +L+PL + + L + G L S++ R+ +C ++ C + + + V V+ +P +LY + L F L Y + A S + D++ +V G+ + PEP TE T+ + E
Sbjct: 90 VNEFPKYKFFIMAVLDLLHAMLLFIPAGNTPPALTVIFVQATVPFSMLFGYLFHSY-------------QYSRMQIVGGILMTSGLMLGILPLLLLLASDVFEEAEMGWHSLCYLLAAIPGALSMLYKEQALA--PQPMDVYYLNAWVAVYQFIGGFLLAPLIFDIPTLHLDQRISGLECLVNGSSEV-------RT---------DKCHMGLALLAAFLACKVGLFYGVGYVMNHTSPGVLYTAFTLAFPLGFFVLDTYQSSGQADDSDVTTARWMDYLSFMVVFLGLVVFRMTPEPSTEATTRSAAE 367
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|1173934804|gb|OQR86037.1| (Drug/Metabolite Transporter (DMT) Superfamily [Achlya hypogyna]) HSP 1 Score: 91.6633 bits (226), Expect = 2.677e-17 Identity = 82/315 (26.03%), Postives = 145/315 (46.03%), Query Frame = 0
Query: 3 RFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFWH--RQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQG----LGMGWDP---YGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVF-DFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLED 307
FP+ ++ +LD L +++ +AG TP LTV+FMQA++P +LL A+ + + + G ++ G+ V + P + + ++ N+ Y+L +P A+S L KE+A+ QP++ YYLN + +YQF+ L+L+PL + + L MG P + A L +S L + I + C +++LC ++ F + VL + LY + ++ +AF+ LA Y V+ + S + + D + +VL G+ Y PEP E T + E
Sbjct: 92 EFPKSKFFVMGMLDLLQSMLLYLAGGKTPATLTVVFMQASIPMTMLL-------------AQLFLNEEYSKYQVIGASIMSAGLLVGLVPVFSMVLSDVFEEQEMAWNSFCYLLAAIPGALSVLYKERALA--TQPMDVYYLNAWVAVYQFIGGLLLAPLAFDIPVPFPLLNMG--PILLFQALHLDQRISGLECLVNGVSEIRTDK------CHLGLGILVVFLLCKVVAFFGIGFVLRHTSVPTLYGSYVLALPIAFIVLAWYQVSGQSDQDSSLSSAWSDIVSCAIVLFGLVLYRLSPEPGMEATTMSAAEK 383
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|1072224802|gb|OEU09551.1| (hypothetical protein FRACYDRAFT_248403 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 89.3521 bits (220), Expect = 2.982e-16 Identity = 85/343 (24.78%), Postives = 153/343 (44.61%), Query Frame = 0
Query: 5 PRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSS-CPPS--FPTCFATAKRREQKR------------------FHRAHWQGGGLILLGIGVAMAPTVHV----AFWHRQT------DIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWD---PYGATDLGTAVSDLCLCLFTARSIPPGR--YPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSLEDGEFF 311
P + L+ALLDTL + ++ + G P LTV+ +Q TLP ++S P F C ++++Q+ H G +I L + +A+ P+++ F+ T +NTL +V C+PAA SQL KE +++ QP+ YLN +L ++Q + ++SPL Y L G D Y +++ ++ C S + Y E +C +Y + V AV+ ++ G +++YR ++ + + ++L VY ++ + A++ + + + L++ G E YH D T + LE FF
Sbjct: 199 PIVDVGLMALLDTLHMQLVFLTGYHVAPTLTVILVQFTLPLTAMISQFVHPDGYFKKCCGQQQQQQQQPQINDVYDNTGQPLPGYGGLSIEHISGSIIISLAVLLALYPSIYTLIDKDFFRYATITEIPLQTALNTLLFVSSCIPAAASQLYKEHIFLQYKQPVQPDYLNFVLSLFQIIFASIMSPLVYTLLGFAAADDWPKLYPSSEFSKNFAEGFQCFIGILSSEREKHGYHDEADCSRTFPLLIMYCFSVISVGVAVDKIVNGGATKVMYRGVSIGIIFSVISLYVYDLHIPDFSYGIAIDSLNLVCVLLLVIGSEVYHRVSLQDAAFETVY-LEIDNFF 540
BLAST of EWM22988.1 vs. NCBI_GenBank
Match: gi|698811076|ref|XP_009838567.1| (hypothetical protein H257_12894 [Aphanomyces astaci] >gi|574106607|gb|ETV72124.1| hypothetical protein H257_12894 [Aphanomyces astaci]) HSP 1 Score: 87.0409 bits (214), Expect = 1.049e-15 Identity = 78/309 (25.24%), Postives = 142/309 (45.95%), Query Frame = 0
Query: 1 MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQATLPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFW----HRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSV----NKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLT 301
++ FP+ ++A+LD +++ + G +TPP LTV+FMQAT+PF +L F F + + Q G IL+ G+ + V + ++G N+L ++L +P A+S L KEQA+ QP++ YYLN + +YQF+ L+L+P+ + + L + G L VS++ R+ +C + ++ C + + + + VL + +LY + + F AL Y + ++ +N F+ +FL G+ + PEP T+ +T
Sbjct: 90 VNEFPKYKFFIMAVLDLCHAMLLFIPGGNTPPALTVIFMQATIPFSML-------FGYLF--------HDYQYSRMQVVGCILMSSGLLLGILPLVLLLASDVFEEAEMGWNSLCFLLAAVPGALSMLYKEQALA--PQPMDVYYLNAWVAVYQFIGGLLLAPVIFDIPTLHLDQRISGLECLVNGVSEV-------RT---------DKCHLGVVILIAFLGCKVGLFYGIGFVLNHTSVGVLYTAFTLAFPIGFFALDAYQSSGQPDDNDVTTARWMNYLSFMVVFL---GLVVFRLLPEPHTDAIT 362 The following BLAST results are available for this feature:
BLAST of EWM22988.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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