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Properties
| Property Name | Value |
|---|
| Product | Translation elongation factor EFG/EF2 |
| Orig transcript id | gnl|cribi|Naga_101153g2.5433.mrna |
| Orig protein id | gnl|cribi|Naga_101153g2.5433 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:130926..132635 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7704 ID=rna7704|Name=rna7704|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
TTCTCCATTGAGGCAAAGCCCCGATCCTCCTGACCGTCATTCTTCCTCCC
CTCCCTCCTTCCCTCCCTCCCTTGCTCCCTTGCTCCCTCCCTTTCTCCAG
ACGAAGCCCGTGTCCCTGTCCCTTGCAAGGAGAATCTTCCCGCAGTTGCC
CTGGCATTTAAATTGGAGGAGGGAAAATTCGGGCAGTTGACGTACATGCG
AGTGTATCAAGGGACGATCAAGCGAGGTGGCTGGCTCTACAACATGCGGA
ACGACAAGAAAGTGAAAGTCCCGCGCCTGGTCCGGATGCATTCGAACGAG
CTGGAAGAAATCGATAGCATCAGCGCCGGAGACGTGTGCGCCATGTTCGG
GGTGGATTGTTCCTCGATGGATTCCTTCACGGACGGCACGGTCAAGTACG
CGTTGACCAGCATGTTCGTGCCCGCGCCCGTCATCTCTTTGGCGGTGAAG
CCCAAGCAGTCGGCCATGTTTGCCAATTTTTCCAAGGCCCTGCAACGCTT
CTGCAAGGAGGACCCCACCCTCCAAGTCGCGTTCAACGAGAAGACCAAAG
AGACCGTTATCAGCGGGATGGGCGAGCTCCACTTGGAGATCTACGTGGAG
CGTCTCAAGCGCGAGTACAACGTGGACTGCAGCGTCGGCAACCCAAACGT
AAATTACCGAGAAACAATCCGAAAAAAAGCGAACTTCAACTATCTCCACA
AAAAGCAATCCGGAGGCCAGGCTGTGAGAAGGGCGCCCGGGACGCGATGG
AAAAGGGGCCGTTGA back to topprotein sequence of rna7704 >rna7704-protein ID=rna7704-protein|Name=rna7704|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MGHPSQGVRVVLTDGTTHAVDSSDMAFRIAAAYAVREAMRAGQACILEPI
MNLEVTSPTEFQGNIMGQLNRRMAVIQSNDVSEDGATVCIKADAPLAQMF
GYSTDLRSITQGKGEFTMEYKTHLPVTRDIQEQLVKKYREASAGGGEDNF
SSLSIAPRLGRVEDGVGTGGTSVGHVCWSCVGWSPTGEKEKVPECLEIEW
LPVSRDARGRRVWEQSRASVGSRSEESPGTNVPLGGPVICWLHWATVAPL
GRKKKNVRGEEGTVARLSMASK back to topmRNA from alignment at CM002473.1:130926..132635+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7704 ID=rna7704|Name=rna7704|organism=Nannochloropsis gaditana|type=mRNA|length=1710bp|location=Sequence derived from alignment at CM002473.1:130926..132635+ (Nannochloropsis gaditana)
ATGGGtttgaccctccctccctcccttcctctctccctcccttcctctct
ccctccctccctctctccttccttccttcccttcctgtctttctcccttg
ctcccgctctccctccctccctccctccctccctccctccctccaggcca
ccCGTCCCAGGGGGTCCGCGTGGTCTTGACGGACGGCACCACCCACGCCG
TCGACTCCTCAGACATGGCATTTCGGATCGCTGCTGCTTATGCTGTGCGA
GAAGCCATGCGGGCGGGGCAAGCCTGCATCTTGGAACCGATCATGAacct
ggaggtggggagggagggtgggaaggagggagggcgggaaggagggaggg
agggaggagggtgggaagtGGTGGAAATAGCAAAGAGGTGTTGACACATA
ACGCCTGTTTGCAATTATATATATGTCTATTCATGTATctgttcccttcc
cctcccttccctccctcgctccctccctccctgcgacTCCTTTCAGGTGA
CCTCCCCCACGGAATTCCAGGGCAACATTATGGGCCAGCTCAATCGACGC
ATGGCCGTCATTCAGGCAAGACTCTTGACCGGACCCGCCGTAGTAGTACA
GCCGAGACTGCGTGAGAAGACCGGTCTGACCCgaattccttccctcctcc
cctttctcagAGCAACGACGTGAGCGAGGACGGCGCGACGGTTTGCATCA
AGGCCGacgcccccctcgcccagaTGTTTGGGTATTCCACCGACTTGCGA
AGTATTACCCAAGGGAAAGGTCCGTGATTGATTTGGAAGGCCGTcgttga
ggaagagggaataGGAAGGAGTGTGgaacgtcctcccccccttcccgcct
tgtGCGTTCGCCTCCATACGTGTCATGATGCCCCAGGAAGAGCATATTAT
GTAACAGCTTTGCCCATTTGAAACATGAGCGTTCGGCAATTTCCTTCCCC
AAACCCGgcctctcccgccccatttcccctgtctttccccccacAACCAC
CACTCCCTCAGGCGAGTTCACGATGGAGTACAAGACACACCTCCCCGTGA
CCAGGGATATCCAGGAGCAGTTGGTGAAGAAATACCGGGAGGCgtcggcg
gggggaggggaggacaagtAAGGTGCTGGGGAAGGGTCGGACGGGGGGTG
ACTCGTCAATTTTGTATGGGTGGGAGCGGCGGGGGCCACGTGGGAtcgag
gatgggaaggcaggtggcggggtggaggggtctGGGGGCGAAGCACGGAG
ACGGccccagggagggggggagggggcaaaaAGGGATGCCGTCGGGAATC
TGAGCCTGTCTGTGTCCGTGGACGACGGCCATCGAagcttttcttctctt
tcgaTTGCGCCCCGgctggggagggtggaggacggtgtgggcacgggggg
gaCGTCTGTCGGGCATGTGTGCTGGTCATGCGTAGGCTGGAGTCCcacgg
gcgagaaggagaaagttCCAGAATGTCTGGAAATCGAATGGCTCCCGGTC
TCGAGGGACGCCCGTGGGAGGCGAGTTTGGGAGCAGTCTAGGGCCTCGGT
GGGCAGCAGGAGCGAGGAAAGCCCCGGGACAAATGTGCCGCTTGGCGGGC
CCGTCATCTGCTGGCTGCATTGGGCTACCGTTGCACCcttgggaagaaag
aaaaaaaatgttcggggagaggaagggaccgTGGCTAGGCTCTCAATGGC
AAGCAAATGA back to topCoding sequence (CDS) from alignment at CM002473.1:130926..132635+ >rna7704 ID=rna7704|Name=rna7704|organism=Nannochloropsis gaditana|type=CDS|length=4914bp|location=Sequence derived from alignment at CM002473.1:130926..132635+ (Nannochloropsis gaditana)
ATGGgccaccCGTCCCAGGGGGTCCGCGTGGTCTTGACGGACGGCACCAC
CCACGCCGTCGACTCCTCAGACATGGCATTTCGGATCGCTGCTGCTTATG
CTGTGCGAGAAGCCATGCGGGCGGGGCAAGCCTGCATCTTGGAACCGATC
ATGAacctggagGTGACCTCCCCCACGGAATTCCAGGGCAACATTATGGG
CCAGCTCAATCGACGCATGGCCGTCATTCAGAGCAACGACGTGAGCGAGG
ACGGCGCGACGGTTTGCATCAAGGCCGacgcccccctcgcccagaTGTTT
GGGTATTCCACCGACTTGCGAAGTATTACCCAAGGGAAAGGCGAGTTCAC
GATGGAGTACAAGACACACCTCCCCGTGACCAGGGATATCCAGGAGCAGT
TGGTGAAGAAATACCGGGAGGCgtcggcggggggaggggaggacaacttt
tcttctctttcgaTTGCGCCCCGgctggggagggtggaggacggtgtggg
cacgggggggaCGTCTGTCGGGCATGTGTGCTGGTCATGCGTAGGCTGGA
GTCCcacgggcgagaaggagaaagttCCAGAATGTCTGGAAATCGAATGG
CTCCCGGTCTCGAGGGACGCCCGTGGGAGGCGAGTTTGGGAGCAGTCTAG
GGCCTCGGTGGGCAGCAGGAGCGAGGAAAGCCCCGGGACAAATGTGCCGC
TTGGCGGGCCCGTCATCTGCTGGCTGCATTGGGCTACCGTTGCACCcttg
ggaagaaagaaaaaaaatgttcggggagaggaagggaccgTGGCTAGGCT
CTCAATGGCAAGCAAATGAATGGgccaccCGTCCCAGGGGGTCCGCGTGG
TCTTGACGGACGGCACCACCCACGCCGTCGACTCCTCAGACATGGCATTT
CGGATCGCTGCTGCTTATGCTGTGCGAGAAGCCATGCGGGCGGGGCAAGC
CTGCATCTTGGAACCGATCATGAacctggagGTGACCTCCCCCACGGAAT
TCCAGGGCAACATTATGGGCCAGCTCAATCGACGCATGGCCGTCATTCAG
AGCAACGACGTGAGCGAGGACGGCGCGACGGTTTGCATCAAGGCCGacgc
ccccctcgcccagaTGTTTGGGTATTCCACCGACTTGCGAAGTATTACCC
AAGGGAAAGGCGAGTTCACGATGGAGTACAAGACACACCTCCCCGTGACC
AGGGATATCCAGGAGCAGTTGGTGAAGAAATACCGGGAGGCgtcggcggg
gggaggggaggacaacttttcttctctttcgaTTGCGCCCCGgctgggga
gggtggaggacggtgtgggcacgggggggaCGTCTGTCGGGCATGTGTGC
TGGTCATGCGTAGGCTGGAGTCCcacgggcgagaaggagaaagttCCAGA
ATGTCTGGAAATCGAATGGCTCCCGGTCTCGAGGGACGCCCGTGGGAGGC
GAGTTTGGGAGCAGTCTAGGGCCTCGGTGGGCAGCAGGAGCGAGGAAAGC
CCCGGGACAAATGTGCCGCTTGGCGGGCCCGTCATCTGCTGGCTGCATTG
GGCTACCGTTGCACCcttgggaagaaagaaaaaaaatgttcggggagagg
aagggaccgTGGCTAGGCTCTCAATGGCAAGCAAATGAATGGgccaccCG
TCCCAGGGGGTCCGCGTGGTCTTGACGGACGGCACCACCCACGCCGTCGA
CTCCTCAGACATGGCATTTCGGATCGCTGCTGCTTATGCTGTGCGAGAAG
CCATGCGGGCGGGGCAAGCCTGCATCTTGGAACCGATCATGAacctggag
GTGACCTCCCCCACGGAATTCCAGGGCAACATTATGGGCCAGCTCAATCG
ACGCATGGCCGTCATTCAGAGCAACGACGTGAGCGAGGACGGCGCGACGG
TTTGCATCAAGGCCGacgcccccctcgcccagaTGTTTGGGTATTCCACC
GACTTGCGAAGTATTACCCAAGGGAAAGGCGAGTTCACGATGGAGTACAA
GACACACCTCCCCGTGACCAGGGATATCCAGGAGCAGTTGGTGAAGAAAT
ACCGGGAGGCgtcggcggggggaggggaggacaacttttcttctctttcg
aTTGCGCCCCGgctggggagggtggaggacggtgtgggcacgggggggaC
GTCTGTCGGGCATGTGTGCTGGTCATGCGTAGGCTGGAGTCCcacgggcg
agaaggagaaagttCCAGAATGTCTGGAAATCGAATGGCTCCCGGTCTCG
AGGGACGCCCGTGGGAGGCGAGTTTGGGAGCAGTCTAGGGCCTCGGTGGG
CAGCAGGAGCGAGGAAAGCCCCGGGACAAATGTGCCGCTTGGCGGGCCCG
TCATCTGCTGGCTGCATTGGGCTACCGTTGCACCcttgggaagaaagaaa
aaaaatgttcggggagaggaagggaccgTGGCTAGGCTCTCAATGGCAAG
CAAATGAATGGgccaccCGTCCCAGGGGGTCCGCGTGGTCTTGACGGACG
GCACCACCCACGCCGTCGACTCCTCAGACATGGCATTTCGGATCGCTGCT
GCTTATGCTGTGCGAGAAGCCATGCGGGCGGGGCAAGCCTGCATCTTGGA
ACCGATCATGAacctggagGTGACCTCCCCCACGGAATTCCAGGGCAACA
TTATGGGCCAGCTCAATCGACGCATGGCCGTCATTCAGAGCAACGACGTG
AGCGAGGACGGCGCGACGGTTTGCATCAAGGCCGacgcccccctcgccca
gaTGTTTGGGTATTCCACCGACTTGCGAAGTATTACCCAAGGGAAAGGCG
AGTTCACGATGGAGTACAAGACACACCTCCCCGTGACCAGGGATATCCAG
GAGCAGTTGGTGAAGAAATACCGGGAGGCgtcggcggggggaggggagga
caacttttcttctctttcgaTTGCGCCCCGgctggggagggtggaggacg
gtgtgggcacgggggggaCGTCTGTCGGGCATGTGTGCTGGTCATGCGTA
GGCTGGAGTCCcacgggcgagaaggagaaagttCCAGAATGTCTGGAAAT
CGAATGGCTCCCGGTCTCGAGGGACGCCCGTGGGAGGCGAGTTTGGGAGC
AGTCTAGGGCCTCGGTGGGCAGCAGGAGCGAGGAAAGCCCCGGGACAAAT
GTGCCGCTTGGCGGGCCCGTCATCTGCTGGCTGCATTGGGCTACCGTTGC
ACCcttgggaagaaagaaaaaaaatgttcggggagaggaagggaccgTGG
CTAGGCTCTCAATGGCAAGCAAATGAATGGgccaccCGTCCCAGGGGGTC
CGCGTGGTCTTGACGGACGGCACCACCCACGCCGTCGACTCCTCAGACAT
GGCATTTCGGATCGCTGCTGCTTATGCTGTGCGAGAAGCCATGCGGGCGG
GGCAAGCCTGCATCTTGGAACCGATCATGAacctggagGTGACCTCCCCC
ACGGAATTCCAGGGCAACATTATGGGCCAGCTCAATCGACGCATGGCCGT
CATTCAGAGCAACGACGTGAGCGAGGACGGCGCGACGGTTTGCATCAAGG
CCGacgcccccctcgcccagaTGTTTGGGTATTCCACCGACTTGCGAAGT
ATTACCCAAGGGAAAGGCGAGTTCACGATGGAGTACAAGACACACCTCCC
CGTGACCAGGGATATCCAGGAGCAGTTGGTGAAGAAATACCGGGAGGCgt
cggcggggggaggggaggacaacttttcttctctttcgaTTGCGCCCCGg
ctggggagggtggaggacggtgtgggcacgggggggaCGTCTGTCGGGCA
TGTGTGCTGGTCATGCGTAGGCTGGAGTCCcacgggcgagaaggagaaag
ttCCAGAATGTCTGGAAATCGAATGGCTCCCGGTCTCGAGGGACGCCCGT
GGGAGGCGAGTTTGGGAGCAGTCTAGGGCCTCGGTGGGCAGCAGGAGCGA
GGAAAGCCCCGGGACAAATGTGCCGCTTGGCGGGCCCGTCATCTGCTGGC
TGCATTGGGCTACCGTTGCACCcttgggaagaaagaaaaaaaatgttcgg
ggagaggaagggaccgTGGCTAGGCTCTCAATGGCAAGCAAATGAATGGg
ccaccCGTCCCAGGGGGTCCGCGTGGTCTTGACGGACGGCACCACCCACG
CCGTCGACTCCTCAGACATGGCATTTCGGATCGCTGCTGCTTATGCTGTG
CGAGAAGCCATGCGGGCGGGGCAAGCCTGCATCTTGGAACCGATCATGAa
cctggagGTGACCTCCCCCACGGAATTCCAGGGCAACATTATGGGCCAGC
TCAATCGACGCATGGCCGTCATTCAGAGCAACGACGTGAGCGAGGACGGC
GCGACGGTTTGCATCAAGGCCGacgcccccctcgcccagaTGTTTGGGTA
TTCCACCGACTTGCGAAGTATTACCCAAGGGAAAGGCGAGTTCACGATGG
AGTACAAGACACACCTCCCCGTGACCAGGGATATCCAGGAGCAGTTGGTG
AAGAAATACCGGGAGGCgtcggcggggggaggggaggacaacttttcttc
tctttcgaTTGCGCCCCGgctggggagggtggaggacggtgtgggcacgg
gggggaCGTCTGTCGGGCATGTGTGCTGGTCATGCGTAGGCTGGAGTCCc
acgggcgagaaggagaaagttCCAGAATGTCTGGAAATCGAATGGCTCCC
GGTCTCGAGGGACGCCCGTGGGAGGCGAGTTTGGGAGCAGTCTAGGGCCT
CGGTGGGCAGCAGGAGCGAGGAAAGCCCCGGGACAAATGTGCCGCTTGGC
GGGCCCGTCATCTGCTGGCTGCATTGGGCTACCGTTGCACCcttgggaag
aaagaaaaaaaatgttcggggagaggaagggaccgTGGCTAGGCTCTCAA
TGGCAAGCAAATGA back to top
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