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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101469g2.3189.mrna |
| Orig protein id | gnl|cribi|Naga_101469g2.3189 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:125138..126462 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7701 ID=rna7701|Name=rna7701|organism=Nannochloropsis gaditana|type=mRNA|length=1712bp
TACTTGTCCACGTACATGCTTTAAAATACCATTCCTCTAAACAACTATAC
TTATAGGTCATAGATGAAACCTTCGACATTTTTGTGCATTCTTTCGTTGT
CCTGGGTAGCACGGCGTAACTAAGCAGGCTATAGCCGATGAAATCCGAAG
GGAACATTCCATCTGAGCCCACTCCTTCCTCGTCCGCCCTCACGAACCCT
CCTATGCCCCGTCACACGCCCTATCGTCCATCTTTGGATCGACTGCCGCA
AATACGCGAGAGCACTGAAAGCGATAAGGAAGCTGATGTCGGACCAGACA
GCGCTCCGTATAAAGATGAGCTGACGGATACTGTCACTTGGCCCCCCCCG
CCTTCGGGTTCCGGCGACTCAGCTCCCTTCCATCCACATCCCTCCCTATC
CTCCCCCACTGAAGTGAGGGAAACAAATGGGAAATCGGGAAATGACGAGG
CGCACGGCAATGCCCAGGCGGACGGGAACAACCCGAGGCGTCCGCCAAGC
TCTTCTCAGTCCCCAGCACGTATCAGTATCCACGTCCCGCCCACCTCGAC
AGGAGGAAAGCTTCCCACATCGGTAAACAACGACCGCAGCCATGTTGAAA
GCACCCAGGAAGGCTCACCCTGCCGTCACGATGCAGGGCATCGGCGCCCC
GTAGGCAAACGGAGATCCTCCCGGTCCAAGCGGCCAGCGTGGCATCCCTT
GTCCTTCTTCCAGCGTCGATCTGCCCGACGCCGGGCCACCGCTCCAGTAA
AGGCTGCTCAGGGCCCTTCGCCCTTGCTCGGCGCGGCTCTGATGCATTTC
CACCGCAAACTCCGACTCGGATTCCGGACGGCGTTGGCCATCGCCCTCGC
CACCACCACCTCCCAATTCTTTTGGAACTGGGCCCATATCCTGACCTGGT
TCAGCGTGACCCTGGTCGTCTCGGGGACACACGAGAGCCTGGGGCGGACC
TTGCGAACGGCCTTCGACTTCTGGAAAGGCTTTACGGTGGTGCTTCCCTT
GGTCTACCTGATCCGCCCCAATCGCGACAGCACGCCCTTGACCATCACCG
GTCTCTTCTTCTCCGTGGCATTTCTCATCTGGCTCCCAGGCATTTCCGAC
CCGGGCAAACGCATGGCCACAATTTTTTTGACGATCGTCGTCATTTACTG
CGTCCTTGACCCCGCGCTGCTGTACAACCACATGGTCCGAGACGTGTGTT
TCACGCTCCTTTTCGCCAACGCCTTTTCCATCATCGCCCTCCTCCTCCCC
TTCCCTTCCCCCTCCTTGGCCCTCCTCGACGTCCGGGTCAAGCTCGGGAT
GGTCCGGCACCGGCTGGGTTCGATTCTCCGCGGGTGCAATGAGGCTTTCA
GTTTGGGCGAGGAAGTGCACTACAGCATGCTCGAACAGCTCTTGCAGGAG
ACGAGTGCGACCGTCGCGGACATCAAGGAACAAATTCCTTTCGTGAAGTG
GGAAGCTGTCTTGTTGCGCCTACCCGTGTCGATGCCGGGTCAACTCGAAA
GCTTCCTCACCACGATCGAAGCGCAGCTCGAGCTGTTTCGGGGCATGCGC
TTATCCCTTCGGCGGATGAGCAACAATGCCACCCATCAGGAATTTCTCAA
GTACCTTCAGGAGCCCCTGAGCCAGGTCGTCAAAGCCAGCGTGGCCGTCT
CTGACGCCGCCGCCCGCCACATCGAAGCCGAGCTGGTCCTCTTTCCTTCC
CGCCCTCCCCCC back to topprotein sequence of rna7701 >rna7701-protein ID=rna7701-protein|Name=rna7701|organism=Nannochloropsis gaditana|type=polypeptide|length=254bp
LPPSLPPALRPFLPPPSSPSSSPPSATSWPSMTLPSTLFFRPQRPSPPSS
RLFFTSPSVPPSPLPRPPAPLPPPLPLPPPRRPPPPPPSLPLLPLLPCLL
PHLPPSLPPPHPASLPPTPTSFGALRGGLDPNLGPLKAPGQHHLKRGRTA
APRSAPPSRPRPLHLGRCDFVRPGGRDGGRGGRREGGGGGGADGSDMLSP
SQPLFPTRARGGREGERLVVSPPANVSGNGRDDAFKNSNPISSHRRPLVP
SPPQ back to topmRNA from alignment at CM002473.1:125138..126462+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7701 ID=rna7701|Name=rna7701|organism=Nannochloropsis gaditana|type=mRNA|length=1325bp|location=Sequence derived from alignment at CM002473.1:125138..126462+ (Nannochloropsis gaditana)
ctccctccctcccttccccccgccctccgccccttcctcccccctccctc
ctcgccgtcctcctctcctccctctgcaaCCTCCTGGCCTTCCATGACCC
TGCCAAGCACGCTCTTCTTCAGGCCGcagcgtccttcccctccttcttcc
cgtctcttcttcacctcgccctccgtcccgccctcccccctccctcgccc
tcccgctcctctccctcctccgctccctctccctcctccccggcggccgc
cacctcctcctccttccctccccctcctccccctccttccttgcctcctc
cctcacctccctccttccctccctcctcctcaccccgcctccctcccacc
gacgCCGACGTCCTTCGGAGCTCTCCGCGGAGGGCTGGATCCGAATCTTG
GGCCTCTTAAAGCTCCTGGTCAACATCACCTTAAGCGCGGAAGGACAGCA
GCTCCTCGTtcggcacctccctcccgccctcgtcccctccaccttggAAG
ATGTGATTTTGTTcgtccgggagggagggacggagggcgggggggaaggc
gggagggagggggaggtggaggagctgatggcTCAGATATGCTATCTCCT
TCGCAACCTCTCTTTCCTACGCGGgcccggggcgggagggaaggcgagcg
TCTTgtcgtctcccctcctgctAACGTTTCTGGTAACGGACGCGATGACG
CATTCAAAAATTCAAATCCGATTTCCAGCCACCGTCGCCCTTTGgtccct
tctccaccacagTGAGAAATCTACCGCCATGCTCCTGCGAGGGCAGGtgc
tttccatcccttcctcccccctccctcctcctcgccctcccccctccctg
cctccgcgtGTGGGAGtcgctggcggcggccaagcgGTTGTTAGCtctgg
acgagaaagagggcaaggaagggcgtatggaggaagaggagctgatgCTC
AGGGGGCTGCAAAGGGCTTTAGAGAATGTGACGGCgctgctctcctcttt
ctcgctgCCGGCGTCCGCTCTCTCCGCCCGGAAACCGTCgatggtgagga
ggggggagggtagtGTCGGCATGGGTAGGAGGGCGGATGCGTCGAATTGA
AGGAGGGTAGAAGTCGAGTAAGGCCAGATTGTAAAATAAAATTAAgctga
ggggggagaaaaaggaaggttCAGAGTGTGAAAATTAGCTTCGTATGGGG
CGGAAGGAAATTGCACCCTGCGGGATAGGAAACTGCCGTGGACAAGAGAG
GCCCTCGATGTCCGGAAAACTGTTTCGTAAATGAGCTTGGAAAAATGAAA
AATTTATTAAGATGTCGATCTTTGT back to topCoding sequence (CDS) from alignment at CM002473.1:125138..126462+ >rna7701 ID=rna7701|Name=rna7701|organism=Nannochloropsis gaditana|type=CDS|length=765bp|location=Sequence derived from alignment at CM002473.1:125138..126462+ (Nannochloropsis gaditana)
ctccctccctcccttccccccgccctccgccccttcctcccccctccctc
ctcgccgtcctcctctcctccctctgcaaCCTCCTGGCCTTCCATGACCC
TGCCAAGCACGCTCTTCTTCAGGCCGcagcgtccttcccctccttcttcc
cgtctcttcttcacctcgccctccgtcccgccctcccccctccctcgccc
tcccgctcctctccctcctccgctccctctccctcctccccggcggccgc
cacctcctcctccttccctccccctcctccccctccttccttgcctcctc
cctcacctccctccttccctccctcctcctcaccccgcctccctcccacc
gacgCCGACGTCCTTCGGAGCTCTCCGCGGAGGGCTGGATCCGAATCTTG
GGCCTCTTAAAGCTCCTGGTCAACATCACCTTAAGCGCGGAAGGACAGCA
GCTCCTCGTtcggcacctccctcccgccctcgtcccctccaccttggAAG
ATGTGATTTTGTTcgtccgggagggagggacggagggcgggggggaaggc
gggagggagggggaggtggaggagctgatggcTCAGATATGCTATCTCCT
TCGCAACCTCTCTTTCCTACGCGGgcccggggcgggagggaaggcgagcg
TCTTgtcgtctcccctcctgctAACGTTTCTGGTAACGGACGCGATGACG
CATTCAAAAATTCAAATCCGATTTCCAGCCACCGTCGCCCTTTGgtccct
tctccaccacagTGA back to top
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