EWM22992.1, cds7680 (CDS) Nannochloropsis gaditana

Overview
NameEWM22992.1
Unique Namecds7680
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:125138..125902 +

Link to JBrowse

Properties
Property NameValue
Start range125138
Start range.
Protein idEWM22992.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101469g2.3189.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:125138..125902 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22992.1 vs. NCBI_GenBank
Match: gi|585103746|gb|EWM22992.1| (hypothetical protein Naga_101469g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 450.669 bits (1158), Expect = 3.576e-159
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 
Query:    1 LPPSLPPALRPFLPPPSSPSSSPPSATSWPSMTLPSTLFFRPQRPSPPSSRLFFTSPSVPPSPLPRPPAPLPPPLPLPPPRRPPPPPPSLPLLPLLPCLLPHLPPSLPPPHPASLPPTPTSFGALRGGLDPNLGPLKAPGQHHLKRGRTAAPRSAPPSRPRPLHLGRCDFVRPGGRDGGRGGRREGGGGGGADGSDMLSPSQPLFPTRARGGREGERLVVSPPANVSGNGRDDAFKNSNPISSHRRPLVPSPPQ 254
            LPPSLPPALRPFLPPPSSPSSSPPSATSWPSMTLPSTLFFRPQRPSPPSSRLFFTSPSVPPSPLPRPPAPLPPPLPLPPPRRPPPPPPSLPLLPLLPCLLPHLPPSLPPPHPASLPPTPTSFGALRGGLDPNLGPLKAPGQHHLKRGRTAAPRSAPPSRPRPLHLGRCDFVRPGGRDGGRGGRREGGGGGGADGSDMLSPSQPLFPTRARGGREGERLVVSPPANVSGNGRDDAFKNSNPISSHRRPLVPSPPQ
Sbjct:    1 LPPSLPPALRPFLPPPSSPSSSPPSATSWPSMTLPSTLFFRPQRPSPPSSRLFFTSPSVPPSPLPRPPAPLPPPLPLPPPRRPPPPPPSLPLLPLLPCLLPHLPPSLPPPHPASLPPTPTSFGALRGGLDPNLGPLKAPGQHHLKRGRTAAPRSAPPSRPRPLHLGRCDFVRPGGRDGGRGGRREGGGGGGADGSDMLSPSQPLFPTRARGGREGERLVVSPPANVSGNGRDDAFKNSNPISSHRRPLVPSPPQ 254
The following BLAST results are available for this feature:
BLAST of EWM22992.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103746|gb|EWM22992.1|3.576e-159100.00hypothetical protein Naga_101469g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7701rna7701Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications