rna7698, rna7698 (mRNA) Nannochloropsis gaditana

Overview
Namerna7698
Unique Namerna7698
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1017
Alignment locationCM002473.1:113713..114626 -

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Properties
Property NameValue
Producthypoxanthine-guanine phosphoribosyltransferase
Orig transcript idgnl|cribi|Naga_101171g1.9558.mrna
Orig protein idgnl|cribi|Naga_101171g1.9558
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:113713..114626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101171g1gene7452Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22995.1cds7677Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7698rna7698-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7698 ID=rna7698|Name=rna7698|organism=Nannochloropsis gaditana|type=mRNA|length=1017bp
TAAATCCAAATAATGCCGCGGGGGTGCCTTTCGCCGGGTGTTTTACCTTC
TTTCAATGTGCATCCCGTGGCGGAGGACAATATTTGCCCCAGTATCGGAA
AACCTCTGAGCGGCCGAGGTCCAGCAGCGTTATGCGAGAAAAGTCGCAAA
CCAACACAGTCAAGTAAATTAGCGGTCCCAAATGCTCCACTGCCATGCAG
TGAAGCACTGCTCAACCCGAGTGGCTTCCCTTTCGGCAAGAACAAGCGTA
GGGTTGAACTGGCCCGGATGATCAGCTCTCTCTTGGGAGACCATGTATAT
ACACACGAGCTTTTAGAAATCATCCTTTGCAAAGGAACGGCGACAATGGA
CGTTCAGCTAGGCTTTCCCGATGACAAGGCGCATATCCACGGGGACTTGA
GCTCGGGGTATGAGGAAACGGGCTACGCTTGTATGGATCAAGACAGATGG
CGGAATGCCTACTTCGAGGCGGCCATAGCCGAAGCCAGCGCAGCCAAGAA
GGCAAGCGCGGAGGGCCTGGAGGTAGAAGAGAAAGGGTCCATGCGTCCGT
CCTGCCAGGCGTCAAACAATGGGCCGGGGCCGCTGCACGGGCACCGGCAT
TGGCTCGAAATCGGCCCAGGGGCGATGGGGACACTTTCCCGCCTCGTTTT
GGAGGCGCATCCGGACAACACTTTAACAGCCATCGAAGCCGTTCCTTCCA
GCGCCCGGGCAGTGGTGAAGCGTCTGCAGCGTTGGTATGGGCGGGAGAAG
AGAAGGAGGGAGGGCGGGTGGGGCCCCGGGGGGGGGCTGGCCGGGCGTGG
GGTGGAGGGGGAGGGAGGGGAGCTGGCAGTGGCAAAAGTCAAGGAAGAAA
GAGGAGGAGTATCGAGGGAGAGGATGGAAAAGGGTCCGAGGCGGTCGGAA
GGGACACGTCGGGCGGGCCGGTCAGGAGGGAGACAGCAGGGGAGGACGTG
GCGGACGGCGGGAAAGAGGGGGAATGTGCCCGTTTCCGGATCGTGCAGGG
GCTGGCAGGACACGTAG
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protein sequence of rna7698

>rna7698-protein ID=rna7698-protein|Name=rna7698|organism=Nannochloropsis gaditana|type=polypeptide|length=240bp
METKHGLFRLTPSVKLIVLLVSVWHLSFNFPSTCLASAFYLHPTLPTAFI
RCPSIPSSNTSPRPKCFPFVLCFSSTSSSPPPPSVFSPPIVIPDAQPLYP
LSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPG
GLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRS
YSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDTVPALPP
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mRNA from alignment at CM002473.1:113713..114626-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7698 ID=rna7698|Name=rna7698|organism=Nannochloropsis gaditana|type=mRNA|length=914bp|location=Sequence derived from alignment at CM002473.1:113713..114626- (Nannochloropsis gaditana)
CAAGGGTGATATCTCCTTGAAAATCCCGCTCTCGTAGTATTATGTTTGTC
ATCTTTCCTTTTTCTACCCATAGCCGGCGAGGAGCTCGTCGGGCCTATCC
TGAATTACGTATGTTCTTATGTATTTTGCCATTCACCTAACCTCCACAGA
GCGCTTCGACCTTTCACACTTTCCGGCCGTACTTAGCCAATAGGATGGAA
ACGAAGCATGGCCTTTTTCGATTGACACCTTCTGTAAAGCTAATTGTCCT
CCTTGTGAGCGTGTGGCACCTTTCTTTCAATTTCCCCTCTACGTGTCTGG
CTTCTGCATTCTATCTCCACCCTACCCTCCCCACCGCCTTCATCCGCTGT
CCAAGCATTCCATCCTCCAACACATCGCCTAGGCCCAAATGCTTCCCTTT
CGTACTCTGTTTCTCCTCGACCTCTTCATCACCTCCCCCTCCCTCCGTCT
TCTCACCCCCCATCGTCATCCCCGACGCGCAACCCCTCTACCCCTTGAGC
GCCTTCGCCCTCCCTCACCATTTTCTGGCTGCAGGGGAACTCGAGGCCGT
GCTGTTGCCGTCCGGGCTCATCGAAGATCGGATCGATAAGATGGCGCAAG
ACCTCCTCGACGACCTTTTTCCCGCGCCATTTCCACCTCCGGGAGGATTG
CTTCCCGTGTGCGAGCTCCACCTCCTGTGCGTACTCAAAGGCGCCAGCCG
TTTCTTCCACGCCCTCCTGGCCAGCCTGCGTCGTCGAGCCCAGGCCCAAC
GGTTGCCGTTACAGATTCAAATTGAATTTATCACGGTCCGGAGCTACTCG
GGGATGCAGAGCACGGGCACGGTGGACGTGAGCGGGTGTGTCCTCGGCAA
CCTCCAGGGCCGGAACGTGGTGCTGGTGGAGGACATGATCGACACGGTAC
CTGCCCTCCCTCCC
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Coding sequence (CDS) from alignment at CM002473.1:113713..114626-

>rna7698 ID=rna7698|Name=rna7698|organism=Nannochloropsis gaditana|type=CDS|length=720bp|location=Sequence derived from alignment at CM002473.1:113713..114626- (Nannochloropsis gaditana)
ATGGAAACGAAGCATGGCCTTTTTCGATTGACACCTTCTGTAAAGCTAAT
TGTCCTCCTTGTGAGCGTGTGGCACCTTTCTTTCAATTTCCCCTCTACGT
GTCTGGCTTCTGCATTCTATCTCCACCCTACCCTCCCCACCGCCTTCATC
CGCTGTCCAAGCATTCCATCCTCCAACACATCGCCTAGGCCCAAATGCTT
CCCTTTCGTACTCTGTTTCTCCTCGACCTCTTCATCACCTCCCCCTCCCT
CCGTCTTCTCACCCCCCATCGTCATCCCCGACGCGCAACCCCTCTACCCC
TTGAGCGCCTTCGCCCTCCCTCACCATTTTCTGGCTGCAGGGGAACTCGA
GGCCGTGCTGTTGCCGTCCGGGCTCATCGAAGATCGGATCGATAAGATGG
CGCAAGACCTCCTCGACGACCTTTTTCCCGCGCCATTTCCACCTCCGGGA
GGATTGCTTCCCGTGTGCGAGCTCCACCTCCTGTGCGTACTCAAAGGCGC
CAGCCGTTTCTTCCACGCCCTCCTGGCCAGCCTGCGTCGTCGAGCCCAGG
CCCAACGGTTGCCGTTACAGATTCAAATTGAATTTATCACGGTCCGGAGC
TACTCGGGGATGCAGAGCACGGGCACGGTGGACGTGAGCGGGTGTGTCCT
CGGCAACCTCCAGGGCCGGAACGTGGTGCTGGTGGAGGACATGATCGACA
CGGTACCTGCCCTCCCTCCC
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Synonyms
Publications