EWM22995.1, cds7677 (CDS) Nannochloropsis gaditana

Overview
NameEWM22995.1
Unique Namecds7677
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:113713..114432 -

Link to JBrowse

Properties
Property NameValue
Start range113713
Start range.
Protein idEWM22995.1
Producthypoxanthine-guanine phosphoribosyltransferase
Partialtrue
Orig transcript idgnl|cribi|Naga_101171g1.9558.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:113713..114432 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029057PRTase-like
Homology
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|585103754|gb|EWM22995.1| (hypoxanthine-guanine phosphoribosyltransferase, partial [Nannochloropsis gaditana])

HSP 1 Score: 477.248 bits (1227), Expect = 4.463e-170
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query:    1 METKHGLFRLTPSVKLIVLLVSVWHLSFNFPSTCLASAFYLHPTLPTAFIRCPSIPSSNTSPRPKCFPFVLCFSSTSSSPPPPSVFSPPIVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDTVPALPP 240
            METKHGLFRLTPSVKLIVLLVSVWHLSFNFPSTCLASAFYLHPTLPTAFIRCPSIPSSNTSPRPKCFPFVLCFSSTSSSPPPPSVFSPPIVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDTVPALPP
Sbjct:    1 METKHGLFRLTPSVKLIVLLVSVWHLSFNFPSTCLASAFYLHPTLPTAFIRCPSIPSSNTSPRPKCFPFVLCFSSTSSSPPPPSVFSPPIVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDTVPALPP 240          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|553183986|ref|XP_005854007.1| (hypoxanthine-guanine phosphoribosyltransferase-like protein [Nannochloropsis gaditana CCMP526] >gi|422295054|gb|EKU22353.1| hypoxanthine-guanine phosphoribosyltransferase-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 209.149 bits (531), Expect = 3.162e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query:  133 MAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 234
            MAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT
Sbjct:    1 MAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 102          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|970665397|gb|KUG02064.1| (Hypoxanthine-guanine phosphoribosyltransferase [Phytophthora nicotianae])

HSP 1 Score: 114.39 bits (285), Expect = 1.193e-27
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query:   90 IVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLR---RRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 234
            ++  +    Y  S F +PHH+L +  +E+VL+P GLIEDR++K+AQD+        +   G  +     HLLCVLKG S FFHAL+  LR   +  +   +P     +FI V+SY G +STG V VSG  L   +G+N++LVED+IDT
Sbjct:   10 VIYLEDDAAYDKSQFLIPHHYLDS--VESVLIPKGLIEDRVEKLAQDI-------RYAYEGKTV-----HLLCVLKGGSAFFHALVEKLRLFHKYNKCDYVPFTF--DFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDT 141          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|566016375|gb|ETI39286.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P1569] >gi|567953861|gb|ETK79504.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|567982505|gb|ETL32923.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|568041984|gb|ETM39345.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|570320108|gb|ETO68056.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P1976] >gi|570943951|gb|ETP09208.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 114.39 bits (285), Expect = 1.285e-27
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query:   90 IVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLR---RRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 234
            ++  +    Y  S F +PHH+L +  +E+VL+P GLIEDR++K+AQD+        +   G  +     HLLCVLKG S FFHAL+  LR   +  +   +P     +FI V+SY G +STG V VSG  L   +G+N++LVED+IDT
Sbjct:   10 VIYLEDDAAYDKSQFLIPHHYLDS--VESVLIPKGLIEDRVEKLAQDI-------RYAYEGKTV-----HLLCVLKGGSAFFHALVEKLRLFHKYNKCDYVPFTF--DFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDT 141          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|675203895|ref|XP_008910832.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica INRA-310] >gi|568089043|gb|ETN03895.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica INRA-310])

HSP 1 Score: 114.39 bits (285), Expect = 1.356e-27
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query:   90 IVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLR---RRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 234
            ++  +    Y  S F +PHH+L +  +E+VL+P GLIEDR++K+AQD+        +   G  +     HLLCVLKG S FFHAL+  LR   +  +   +P     +FI V+SY G +STG V VSG  L   +G+N++LVED+IDT
Sbjct:   10 VIYLEDDAAYDKSQFLIPHHYLDS--VESVLIPKGLIEDRVEKLAQDI-------RYAYEGKTV-----HLLCVLKGGSAFFHALVEKLRLFHKYNKCDYVPFTF--DFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDT 141          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|568012009|gb|ETL86187.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica])

HSP 1 Score: 114.005 bits (284), Expect = 1.826e-27
Identity = 62/139 (44.60%), Postives = 86/139 (61.87%), Query Frame = 0
Query:   99 YPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLR---RRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 234
            Y  S F +PHH+L +  +E+VL+P GLIEDR++K+AQD+        +   G  +     HLLCVLKG S FFHAL+  LR   +  +   +P     +FI V+SY G +STG V VSG  L   +G+N++LVED+IDT
Sbjct:   19 YDKSQFLIPHHYLDS--VESVLIPKGLIEDRVEKLAQDI-------RYAYEGKTV-----HLLCVLKGGSAFFHALVEKLRLFHKYNKCDYVPFTF--DFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDT 141          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|695425116|ref|XP_009529098.1| (hypothetical protein PHYSODRAFT_354768 [Phytophthora sojae] >gi|348675531|gb|EGZ15349.1| hypothetical protein PHYSODRAFT_354768 [Phytophthora sojae])

HSP 1 Score: 112.079 bits (279), Expect = 9.289e-27
Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 0
Query:   90 IVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLR---RRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDTVPALPP 240
            ++  +    Y  + F +PHH+L +  +++VL+P GLIEDR++K+AQD+        +   G  +     HLLCVLKG S FFHAL+  LR   +  +   +P     +FI V+SY G +STG V VSG  L   +G+N++LVED+IDT   +  
Sbjct:   10 VIYLEDDATYDKAQFLVPHHYLDS--IDSVLIPKGLIEDRVEKLAQDI-------RYAYEGKTV-----HLLCVLKGGSAFFHALVDKLRLFHKYNKCDYVPFTF--DFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAK 147          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|570975052|gb|ETP37260.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 111.309 bits (277), Expect = 2.017e-26
Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   90 IVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLR---RRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDTVPALPP 240
            ++  +    Y  S F + HH+L +  +E+VL+P GLIEDR++K+AQD+        +   G  +     HLLCVLKG S FFHAL+  LR   +  +   +P     +FI V+SY G +STG V VSG  L   +G+N++LVED+IDT   +  
Sbjct:   10 VIYLEDDAAYDKSQFLILHHYLDS--VESVLIPKGLIEDRVEKLAQDI-------RYAYEGKTV-----HLLCVLKGGSAFFHALVEKLRLFHKYNKCDYVPFTF--DFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAK 147          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|1183511436|gb|ORZ34675.1| (phosphoribosyltransferase-like protein [Catenaria anguillulae PL171])

HSP 1 Score: 109.383 bits (272), Expect = 1.178e-25
Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 0
Query:   79 SPPPPSVFSPPIVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRRRAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGC--VLGNLQGRNVVLVEDMIDT 234
            S PP  V    IVIPD  P YPLS F +P H+  A  +E VL+P GLI DR++K+A D+  D         G L  +C      VLKG  +FF  L A +++R  AQ   L + ++FI V+SY   +STG V +S     L  L+G++++LVED+IDT
Sbjct:    2 SVPPSPVDKNWIVIPDDFPGYPLSQFIIPSHYRDA--VERVLIPHGLILDRVEKLAYDIAKD-------TEGSLTAIC------VLKGGHQFFADLTAKMKKRTNAQGNNLPLHLDFIKVKSYHNTESTGNVSISYTEQELKGLKGKHLLLVEDIIDT 144          
BLAST of EWM22995.1 vs. NCBI_GenBank
Match: gi|298708407|emb|CBJ48470.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 109.383 bits (272), Expect = 1.903e-25
Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 0
Query:   88 PPIVIPDAQPLYPLSAFALPHHFLAAGELEAVLLPSGLIEDRIDKMAQDLLDDLFPAPFPPPGGLLPVCELHLLCVLKGASRFFHALLASLRR-RAQAQRLPLQIQIEFITVRSYSGMQSTGTVDVSGCVLGNLQGRNVVLVEDMIDT 234
             P VI D Q  +PL  F++PHH+   G+++ +++P GL+ DRI K+A+D+  D                 +HLLCVLKG S +F  L+ +LRR    A    +    +FI V+SY G+ STG+V ++G  L  L+G+NV++VED+IDT
Sbjct:   25 DPFVIGD-QLSFPLDMFSVPHHY--KGDVKEIMIPHGLVIDRIQKLAKDIRHDYADTT------------IHLLCVLKGGSAYFQDLITALRRFHDHADHSYVPFTFDFIKVKSYKGVSSTGSVQITGGDLAALEGKNVLVVEDIIDT 157          
The following BLAST results are available for this feature:
BLAST of EWM22995.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103754|gb|EWM22995.1|4.463e-170100.00hypoxanthine-guanine phosphoribosyltransferase, pa... [more]
gi|553183986|ref|XP_005854007.1|3.162e-66100.00hypoxanthine-guanine phosphoribosyltransferase-lik... [more]
gi|970665397|gb|KUG02064.1|1.193e-2741.89Hypoxanthine-guanine phosphoribosyltransferase [Ph... [more]
gi|566016375|gb|ETI39286.1|1.285e-2741.89hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|675203895|ref|XP_008910832.1|1.356e-2741.89hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|568012009|gb|ETL86187.1|1.826e-2744.60hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|695425116|ref|XP_009529098.1|9.289e-2738.96hypothetical protein PHYSODRAFT_354768 [Phytophtho... [more]
gi|570975052|gb|ETP37260.1|2.017e-2639.61hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|1183511436|gb|ORZ34675.1|1.178e-2541.77phosphoribosyltransferase-like protein [Catenaria ... [more]
gi|298708407|emb|CBJ48470.1|1.903e-2539.86conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7698rna7698Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications