rna7696, rna7696 (mRNA) Nannochloropsis gaditana

Overview
Namerna7696
Unique Namerna7696
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length681
Alignment locationCM002473.1:108953..109940 +

Link to JBrowse

Properties
Property NameValue
Productgmp reductase 2
Orig transcript idgnl|cribi|Naga_100938g2.8981.mrna
Orig protein idgnl|cribi|Naga_100938g2.8981
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:108953..109940 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100938g2gene7450Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7696rna7696-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22998.1cds7675Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7696 ID=rna7696|Name=rna7696|organism=Nannochloropsis gaditana|type=mRNA|length=681bp
CTCCCTCCCTCCCTCCCTCGATATCCATTCCTCCCTCTCTGCCTCCCTGT
TTCACCGAATCCTAATCGCCGCCCCCGTTTCTTCACTCCCTCATCCTCTC
TTCTCTTTTCGCTCTCCCTCCCTCTCTCCCTCCTTCTCTCCCTCCCTCCC
TCCCAGGTCTTATACATCAAGAGCACCATGGGCCCTCGGTTCCAGATTTA
CTTCTAGAATGTTTGCGCGCGGAGGAAGGAAGGAAGGGAGGGAAGGAGGG
AGGGAAGGATGGTAACGCCGTGGGAGGGAAAGGAGACAAGAAAGCGACCC
GGAGGTGGAGGAAACGCGTTCGCGCAACTTTTTAAGAAGAATTCCGCGGG
GAGGGGGCAGAAAAACGCGTCAGTCTACGGAAGGGAGGGCGAAATAGGAA
AAGAAACAAGAACCGAAAGAAACTTTTTTGAAATCATATCCCGTTGCATC
TCCAAGAGTAAGGAGCACTGCGGTATGATGGGAAATCGGAGAGGTTCAGG
TCAATGCTCAAGTGAGAGGCATGAGTACGGTTGCGTGGCTTTGTGGGGAA
TGGCGTCACTCCTGTCTCTGTGGTTTGCACATACTACTGGGATCCGTGCC
GAAACGCCCGTGGTAGAGGCAGCCGTCGCTGCCGTTGATTTTAATTTTAA
TTCGTACTGAATAATTCTGTCTTCTATTTCT
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protein sequence of rna7696

>rna7696-protein ID=rna7696-protein|Name=rna7696|organism=Nannochloropsis gaditana|type=polypeptide|length=113bp
MFDILGGLRSTCTYVGASKLKELSKRTTFIRVTQQLNPVFGPDQKPQPAP
KPSPRTNDIWLQRNGRQRPNWKKAFFNCGGNLDSVYRKREAMIRGFSARL
YRFFALTIKNFNT
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mRNA from alignment at CM002473.1:108953..109940+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7696 ID=rna7696|Name=rna7696|organism=Nannochloropsis gaditana|type=mRNA|length=988bp|location=Sequence derived from alignment at CM002473.1:108953..109940+ (Nannochloropsis gaditana)
atgttTGTCTTTTTCCAGCAAGACAATGTTACTTCCTCTATCCTCCTTAC
CATCGttgaaccccccccccccccctcccatgcacattttccttcctctg
tttacctcctttccccccttccttccctcccacctttcccCACTTCCcta
cccctcctttccctcccttccctccacacAGGACATTCTGGGGGGGCTGC
GCTCTACCTGCACCTACGTGGGGGCAAGCAAATTGAAGGAGCTCTCCAAG
CGCACCACCTTTATTCGGGTCACTCAGCAGCTGAACCCGGTGAGTGAGTG
AGACTAGGGGGGACAGACGGTAGGGGTGAaattcttctctctctctatat
CTATACACATATCCATTCTagttctttccctttttctgcGTCCCGTACTG
CCGTTTCATCCCCGGCTTCAGCGAGCACATGCCTCGGTTTCGATGCCCTC
CccgcatttttttttcttttgaaCTCGTGCTTAGGGCCCCTACGTTGCTG
CTCCTGCCCGTGTTGCCAGATCACAATTTTGGTCGTGGGGGGATTAAATT
CTTGTGCACTCATGTTTTTCATGGTTCGATCAACCAGGGGTCTCTTGTTC
TTTCCGCCTTCTCTCAGTGTCATAGGCAGACATGCACTTGAATGCATTTC
AACCATCTCTGATAATAGCTGGAGCATTCATCggtctccttcccgctctt
tccctccactcttTGAAGGTATTCGGACCCGATCAGAAGCCACAGCCGGC
ACCTAAGCCTTCCCCACGGACGAGTTGATTGCTTGTACGCTCTTCGAAAG
CTCATGGACAGAGAGATGACATTTGGCTGCAAAGGAACGGTAGACAACGG
CCAAATTGGAAAAAGGCTTTTTTCAACTGTGGTGGGAATTTGGATTCGGT
TTACAGGAAACGTGAGGCAATGATTCGTGGCTTTTCCGCACGCCTTTACC
GTTTCTTTGCCCTGACCATTAAAAACTTTAACACATGA
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Coding sequence (CDS) from alignment at CM002473.1:108953..109940+

>rna7696 ID=rna7696|Name=rna7696|organism=Nannochloropsis gaditana|type=CDS|length=1368bp|location=Sequence derived from alignment at CM002473.1:108953..109940+ (Nannochloropsis gaditana)
atgttTGACATTCTGGGGGGGCTGCGCTCTACCTGCACCTACGTGGGGGC
AAGCAAATTGAAGGAGCTCTCCAAGCGCACCACCTTTATTCGGGTCACTC
AGCAGCTGAACCCGGTATTCGGACCCGATCAGAAGCCACAGCCGGCACCT
AAGCCTTCCCCACGGACGAATGACATTTGGCTGCAAAGGAACGGTAGACA
ACGGCCAAATTGGAAAAAGGCTTTTTTCAACTGTGGTGGGAATTTGGATT
CGGTTTACAGGAAACGTGAGGCAATGATTCGTGGCTTTTCCGCACGCCTT
TACCGTTTCTTTGCCCTGACCATTAAAAACTTTAACACATGAatgttTGA
CATTCTGGGGGGGCTGCGCTCTACCTGCACCTACGTGGGGGCAAGCAAAT
TGAAGGAGCTCTCCAAGCGCACCACCTTTATTCGGGTCACTCAGCAGCTG
AACCCGGTATTCGGACCCGATCAGAAGCCACAGCCGGCACCTAAGCCTTC
CCCACGGACGAATGACATTTGGCTGCAAAGGAACGGTAGACAACGGCCAA
ATTGGAAAAAGGCTTTTTTCAACTGTGGTGGGAATTTGGATTCGGTTTAC
AGGAAACGTGAGGCAATGATTCGTGGCTTTTCCGCACGCCTTTACCGTTT
CTTTGCCCTGACCATTAAAAACTTTAACACATGAatgttTGACATTCTGG
GGGGGCTGCGCTCTACCTGCACCTACGTGGGGGCAAGCAAATTGAAGGAG
CTCTCCAAGCGCACCACCTTTATTCGGGTCACTCAGCAGCTGAACCCGGT
ATTCGGACCCGATCAGAAGCCACAGCCGGCACCTAAGCCTTCCCCACGGA
CGAATGACATTTGGCTGCAAAGGAACGGTAGACAACGGCCAAATTGGAAA
AAGGCTTTTTTCAACTGTGGTGGGAATTTGGATTCGGTTTACAGGAAACG
TGAGGCAATGATTCGTGGCTTTTCCGCACGCCTTTACCGTTTCTTTGCCC
TGACCATTAAAAACTTTAACACATGAatgttTGACATTCTGGGGGGGCTG
CGCTCTACCTGCACCTACGTGGGGGCAAGCAAATTGAAGGAGCTCTCCAA
GCGCACCACCTTTATTCGGGTCACTCAGCAGCTGAACCCGGTATTCGGAC
CCGATCAGAAGCCACAGCCGGCACCTAAGCCTTCCCCACGGACGAATGAC
ATTTGGCTGCAAAGGAACGGTAGACAACGGCCAAATTGGAAAAAGGCTTT
TTTCAACTGTGGTGGGAATTTGGATTCGGTTTACAGGAAACGTGAGGCAA
TGATTCGTGGCTTTTCCGCACGCCTTTACCGTTTCTTTGCCCTGACCATT
AAAAACTTTAACACATGA
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Synonyms
Publications