rna7693, rna7693 (mRNA) Nannochloropsis gaditana

Overview
Namerna7693
Unique Namerna7693
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length210
Alignment locationCM002473.1:102084..102615 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101650g2.5899.mrna
Orig protein idgnl|cribi|Naga_101650g2.5899
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:102084..102615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101650g2gene7447Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7693rna7693-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23000.1cds7672Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7693 ID=rna7693|Name=rna7693|organism=Nannochloropsis gaditana|type=mRNA|length=210bp
ATGCGGGAGGAAGGGAAGGAGAAGAGAATGGAAATCAAAGGTTGCATTCG
GGTCGTACAGGTCTTGCGTGAGCCCATGTGTCACGCCCTTAAATGGTACT
TCTCTGTCGCAGATACCTCAAGAAAGTCTGGCATTGTATCCGTAGTGTGT
ATATTGCATGGTCAACGGACGATGACGCGTATGATGAAAAAGGCCTCAGA
TTCATGGTGA
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protein sequence of rna7693

>rna7693-protein ID=rna7693-protein|Name=rna7693|organism=Nannochloropsis gaditana|type=polypeptide|length=95bp
MCAVAPRLSPPPSLPLHPEKEKGNRNARCQPARQRRAVKISIRTTAPSAM
PVHVKRKAIVQLRLSTQAAERLEGLIKEGLTEDLVAVVGPDGGEC
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mRNA from alignment at CM002473.1:102084..102615-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7693 ID=rna7693|Name=rna7693|organism=Nannochloropsis gaditana|type=mRNA|length=532bp|location=Sequence derived from alignment at CM002473.1:102084..102615- (Nannochloropsis gaditana)
ATGTGTGCAGTGCATCTGACAGCTTCTTACTATCGTTTGATGGGCTTTGG
CCGTATATTTTTCATGACGGGTGACGGGGCGTAAGAGCGCTTCCGGCCTC
GGGACAGGGAGGGATCATATTACATTTTTTAGGTTGATGAACTTGGGTAA
AAAAAGTGAGAGTCGGGCAAATCTGCTGCGTCGCAACATAGATCACGGTT
TGCTGCCTTGAAATTCACGCTTTCTCATTTTTGGCGCCTGTGTTGTGTGA
CAGGTAGCGCCTCGTCTCTCCCCGCCCCCTTCCCTTCCCCTGCATCCGGA
AAAGGAAAAAGGAAACCGAAATGCACGTTGTCAACCTGCACGCCAGCGAC
GCGCAGTAAAAATATCGATCCGTACAACTGCACCCTCTGCTATGCCTGTC
CATGTGAAGCGTAAAGCCATTGTCCAGCTTCGGCTGAGCACGCAGGCAGC
AGAGCGCTTGGAAGGGTTGATAAAGGAGGGTTTAACGGAGGACCTTGTCG
CAGTCGTGGGGCCCGACGGAGGTGAGTGTTGA
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Coding sequence (CDS) from alignment at CM002473.1:102084..102615-

>rna7693 ID=rna7693|Name=rna7693|organism=Nannochloropsis gaditana|type=CDS|length=576bp|location=Sequence derived from alignment at CM002473.1:102084..102615- (Nannochloropsis gaditana)
GTAGCGCCTCGTCTCTCCCCGCCCCCTTCCCTTCCCCTGCATCCGGAAAA
GGAAAAAGGAAACCGAAATGCACGTTGTCAACCTGCACGCCAGCGACGCG
CAGTAAAAATATCGATCCGTACAACTGCACCCTCTGCTATGCCTGTCCAT
GTGAAGCGTAAAGCCATTGTCCAGCTTCGGCTGAGCACGCAGGCAGCAGA
GCGCTTGGAAGGGTTGATAAAGGAGGGTTTAACGGAGGACCTTGTCGCAG
TCGTGGGGCCCGACGGAGGTGAGTGTTGAATGTGTGCAGTAGCGCCTCGT
CTCTCCCCGCCCCCTTCCCTTCCCCTGCATCCGGAAAAGGAAAAAGGAAA
CCGAAATGCACGTTGTCAACCTGCACGCCAGCGACGCGCAGTAAAAATAT
CGATCCGTACAACTGCACCCTCTGCTATGCCTGTCCATGTGAAGCGTAAA
GCCATTGTCCAGCTTCGGCTGAGCACGCAGGCAGCAGAGCGCTTGGAAGG
GTTGATAAAGGAGGGTTTAACGGAGGACCTTGTCGCAGTCGTGGGGCCCG
ACGGAGGTGAGTGTTGAATGTGTGCA
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Synonyms
Publications