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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101067g1.5754.mrna |
| Orig protein id | gnl|cribi|Naga_101067g1.5754 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:58584..60970 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7683 ID=rna7683|Name=rna7683|organism=Nannochloropsis gaditana|type=mRNA|length=1637bp
TCCCTTCTCCCCTCCTCCAGTCCCTGGGACGCGTCAACATCCAAACCTTC
GACCAGAGCGATTTGGAGATCGATAACAGCCTCAACAACCTGCACTCCCC
CTGGAGCTACCTCTCCCTCCTCACGGACGGCATTGCGAGCCCGAATTTAG
CCGAAGCCACGGCCTCGTGCTGAGCATAAGAGGCTAGGAACGAGCATCAT
AGGGGTTTCATTTAGAAATGGAAAAGGAAAGAGGATAGATAGTAGACGGG
AAGGATGGAAACGGGGGTAAAGCCTCTTTAATTAGCAGAGGAGGAAGGGT
AAAAAAAGGGAAGAGAGGGCGGAAAAATTAGGGACGAAGTGCACGGAGAA
AAAGAGAGCGGGAAAACAAAGGGGGTTTGCAGAAGGGGGAAAGAAAGTGA
CCTAAAGATTTGGAGGTCGGTCAAAAAGAATGAAGTGGATGTATTTCAAA
TATTCGGCTCAAGGATGGGCCGCTAACTGTGGTGTCTCTCCAAATGAAAG
TTTCAAATCGTTATTATGATTTCAAGGCCATCGTGAATGCATAGTACAGG
AGTAGGAAGGCTGGTTGACTGCTTATCTATTTGTTCTAAAAAGACACTTT
CTGCTTTTTGTTGAAGATGCTTTTACGACGCCTCCGAGCACAAATCGAAC
GAGTCTCCCATTTTTATACAAAGGAGTCCGACGACACACTAACATTTAAG
CACATGTAGCTGCATGCTCAAGCTTCGTGTCTTTTTGAGAAGGATTCAGA
CCCAAAAAAAGTCCGCAGTGCGGCAACAGGATAACCTCCTCCCCCCCGCT
TTAGCTCAACTTACCAAATAGCACTGACCGCATAGTTGACAACGCTGACC
TTAATCCCAACTCGACATTGCCCCGCTGCAGGCCTGCGTTACATCAAGCA
ATTATGGGTTCCAACGCGAAGGGGAAAACATCCTTTCTCGGGAACGTTCT
GACGCCTTCGTTTTACCTTGTCCTCCTTACCGCCCTCACGACCTCCTACC
ACTACTTATCTTCCCACCACGCTGAAGTGGATTCCTACCTCGGCGGACCA
CGCGTCCGGAGTTTCGAGAATTTTGAGACATTTTACAAGCGGGTGTACAG
GGAGCAGCACGCTGACGATCACAACCGTTACTTGCATTTCTTCGGGACTA
CCCTCGTCTTGGCTTACGCGGCCTCGGAGCCCTTACTCCTGGTCGCCGCC
ACGATGGCGGTGGTGGTGGGGCTGAATGTGTATGAACTCACGTACATGTT
CAAGCACGGTGCCCTGGAAGGCGCCGCCATGCTTCTCACCTACCTCGTCC
TCAGCCGTGCCCTCCTTCGGTCCCTCTCACGGCCCCTCCTTCCCCTCCTC
CTTGGCTACGGCTGCGCATGGATGGGTCATTTCTTCCTGGAAGGGAACAA
ACCAGCCACTTTCACGTACGCGGTCTTCTCTTTCATGGGCGACTTCCGAA
TGTGGTGGGAGACAGTAGGGGAGTTGGGGCGTCGGATGCTCGGATGACAC
ATCCCTTGGGAGGTTGAATGTGGGAAAAGGGTGAAAGAACGAATGCAGGG
GCTGTGGAGGGAGCGGGACGAAGGATCGATTTCTCAGGGTGTCCGTAAGG
CATGTAAAAAAAATAAAATAAGCTGGAAGGACGATAT back to topprotein sequence of rna7683 >rna7683-protein ID=rna7683-protein|Name=rna7683|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MKNASYRKTAWQAKTFLSSVIFEQQGLSNHTKVPFNDRRYEQKLATEKNA
SHIESAANFAYDHPRCQGMTSFQGGLQFIYTCSSVPARSGHLNVEYAGTR
PLSEAKRVRVPIVLPWVTRLEGGMSLLFDFLGAFTIIFLSQALSRYHLAW
IVIDCIPPIKLSLFEHGLTGTKKPLMPQAKRNLQDGRGATASFPRETRQR
GRGGRDF back to topmRNA from alignment at CM002473.1:58584..60970- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7683 ID=rna7683|Name=rna7683|organism=Nannochloropsis gaditana|type=mRNA|length=2387bp|location=Sequence derived from alignment at CM002473.1:58584..60970- (Nannochloropsis gaditana)
ATGAAAAATGCATGTGAGTATTCTTCCCTGAGGGAGAATAAACGAAGGAT
GACCATCGGACGAGGGTCCCCCCATGTGAAGCAGGCGTTTGCAAAAAATG
TTGCCAGGGCACGAAGTGATGAAGGAATCCCTTGTGTACACGATTGTTTG
TGGGAAGTGCCACTGAAGCCTCTAAAGCCCATGCCCGGACTTCCTTCGTT
TCAGTTACGCTCTCAGAATTTCAAGTGGAAATTTCAGCGGCTTCTAGCGA
TCGCGTGGTTGCACTGAGGCAAGTCATGGTCGTATGCATATGGGGGGAAA
GCACCCACACATAACTAATTGTGCACTTATCGCCCATAATAATACAATGT
TTGTCTTCTGTGTACCTGCCCGGTCATTGGAATGCGTTCCATGCTTTTTC
CCGACAAATTCTTTATTTTGGCGCGAAGCCTACAGGAAGACCGCTTGGCA
AGCTAAAACTTTCCTTTCCAGCGTAATTTTTGAGCAACAAGGATTGTCAA
ACCATACAAAGGTCCCCTTCAATGATCGAAGGTACGAGCAGAAACTTGCA
ACAGAAAAGAACGCATCACATATTGAGTCTGCAGCTGTGAGGAAGACGCA
AGCAAGTGATGTATCGAGGGCCCTGTGGGCGTGGGTAAATGGTGCTGCGA
GCAACCGCATCCATGAGCGTGAAATAATTCAAACCCAAAAAAGTCACCGT
GATACTCCGCCAAGAACTTTGCCTACGACCATCCACGTTGCCAAGGTATG
ACCTCGTTTCAAGGTGGTCTTCAATTCATATATACTTGTAGTTCCGTTCC
TGCCAGAAGCGGCCACCTCAACGTGGAATACGCCGGAACCCGTCCGCTCT
CCGAAGCTAAGCGCGTTCGAGTCCCAATAGTACTGCCGTGGGTGACCAGG
CTGGAAGGTGGGATGTCGCTTCTTTTTGACTTTTTGGGAGCATTTACGTC
GCATGATGAATGCATGGACGTGACACATTGAAAGACCAAGTTTCTCCGCG
CTTGTTTTTTTCTCTTGTCGTTTTCAGGTTTTGAAGTGGCGTATGAATGG
TTAAGATATCACTGGCGGTCATGACAAGGGAGGGAGTTCGGATGTCTCGC
TCTTGTATTGTTTTCTCAAGCATTATTTTTTTAAGCCAGGCTCTATCACG
ATATCATCTTGCCTGGATCGTCATAGACTGCATTCCACCTATTAAATTGA
GTCTTTTTGAGCACGGGCTTACTGGTACGTGCTGAACTGCGGGTGGAATG
ACAGATGCTGTTTTCCCCCCTAACAAATTACACCAGAGCAAGCTTTTCAT
TCAAACGGATTCATGACTCATTTCAGGCACAAAGAAAGTTCTTGATGGAT
TCTCTACGAAAACGCTTTCCTTTAATCACGGCAAGGCAAGGTGGGAGGGC
AACGGCCCATATTGGGACCAGTCCTCCATGCGTTCAGAGCTATATTATAC
AATTCGCGAACAACAACTGCCCAACGCCAGCTAACAACTCAAAGTATACT
TCGTGTGACGTTCTCTTGTGCAAACGAGAAATCTTTCTTCCAGGAAAAAT
GTGGTATCTGTCTGCCAGCAACCTCCTCGCTCAAATTTGTGAAGCAACGG
CGGCGAAAGGCTCCATGATGAGCTCATAGAGCCGCTTAAAATAATACCTT
CTACTGATGCTGAGTTGACGCGTATTGGTCATCTCCCCATGAATTTCAGC
CCTTGATGTAAGAACGACTTCTATTTATACGGTGTCTTGTGACGCTCGGT
CTGCGCAAGGGAACAAAACGGGTCAAATGGAAAGGGGAGAGGGTCGGCCT
CGGATGATTATCTAGAACGTGTTCTCACTGCTATTTGGCTACAAAACCAT
CCCACATTGCCCTCTCCCGGTGTGTCGCTGTGCATGTGTTTGGTCTTTCT
CCTCTTACTAGCTTTTTTGCTTCTGATGAACGCTCTCTTTCGACTAAACC
TGCCCATTACTGATGTCATCTCGCGAGTTCGGATGACACGGAGCACCCTC
AGGGCTGGAGTAAGTATCCCCTCCCTCTTTCTCACTCTATCCCACGATGA
CTCTCACAGGCCCCAAGCGAAACGTAACTTACAAGATGGTAGAGGAGCAA
CAGCATCATTCCCTCGTGAAACGCGTCAGGTAAGGCGCACAATACCCCAA
TGGAGCAGGGGAGGAGGAAGAGGGGGGGAGGGAAAGGGGGTTGGCATACG
TACAGAGAGGAGAAGTGGAGAAGGAGAGCGATGCACACGTCCAGTGTAAC
CACACAGAGTCTCAAATCATTGCATGCTTGTCAATCAAATGCAAGCTATG
CGAGATACATCAAGTCATGGTCATGTCCCCTTCCCTTTCCTTCACTTCAC
GCGTCGCCAGAGGGGCCGTGGAGGCAGAGACTTTTGA back to topCoding sequence (CDS) from alignment at CM002473.1:58584..60970- >rna7683 ID=rna7683|Name=rna7683|organism=Nannochloropsis gaditana|type=CDS|length=4992bp|location=Sequence derived from alignment at CM002473.1:58584..60970- (Nannochloropsis gaditana)
AGGGGCCGTGGAGGCAGAGACTTTTGAGCCCCAAGCGAAACGTAACTTAC
AAGATGGTAGAGGAGCAACAGCATCATTCCCTCGTGAAACGCGTCAGCCC
TTGATGCACAAAGAAACATTATTTTTTTAAGCCAGGCTCTATCACGATAT
CATCTTGCCTGGATCGTCATAGACTGCATTCCACCTATTAAATTGAGTCT
TTTTGAGCACGGGCTTACTGAACTTTGCCTACGACCATCCACGTTGCCAA
GGTATGACCTCGTTTCAAGGTGGTCTTCAATTCATATATACTTGTAGTTC
CGTTCCTGCCAGAAGCGGCCACCTCAACGTGGAATACGCCGGAACCCGTC
CGCTCTCCGAAGCTAAGCGCGTTCGAGTCCCAATAGTACTGCCGTGGGTG
ACCAGGCTGGAAGGTGGGATGTCGCTTCTTTTTGACTTTTTGGGAGCATT
TACCCTACAGGAAGACCGCTTGGCAAGCTAAAACTTTCCTTTCCAGCGTA
ATTTTTGAGCAACAAGGATTGTCAAACCATACAAAGGTCCCCTTCAATGA
TCGAAGGTACGAGCAGAAACTTGCAACAGAAAAGAACGCATCACATATTG
AGTCTGCAGCTATGAAAAATGCATAGGGGCCGTGGAGGCAGAGACTTTTG
AGCCCCAAGCGAAACGTAACTTACAAGATGGTAGAGGAGCAACAGCATCA
TTCCCTCGTGAAACGCGTCAGCCCTTGATGCACAAAGAAACATTATTTTT
TTAAGCCAGGCTCTATCACGATATCATCTTGCCTGGATCGTCATAGACTG
CATTCCACCTATTAAATTGAGTCTTTTTGAGCACGGGCTTACTGAACTTT
GCCTACGACCATCCACGTTGCCAAGGTATGACCTCGTTTCAAGGTGGTCT
TCAATTCATATATACTTGTAGTTCCGTTCCTGCCAGAAGCGGCCACCTCA
ACGTGGAATACGCCGGAACCCGTCCGCTCTCCGAAGCTAAGCGCGTTCGA
GTCCCAATAGTACTGCCGTGGGTGACCAGGCTGGAAGGTGGGATGTCGCT
TCTTTTTGACTTTTTGGGAGCATTTACCCTACAGGAAGACCGCTTGGCAA
GCTAAAACTTTCCTTTCCAGCGTAATTTTTGAGCAACAAGGATTGTCAAA
CCATACAAAGGTCCCCTTCAATGATCGAAGGTACGAGCAGAAACTTGCAA
CAGAAAAGAACGCATCACATATTGAGTCTGCAGCTATGAAAAATGCATAG
GGGCCGTGGAGGCAGAGACTTTTGAGCCCCAAGCGAAACGTAACTTACAA
GATGGTAGAGGAGCAACAGCATCATTCCCTCGTGAAACGCGTCAGCCCTT
GATGCACAAAGAAACATTATTTTTTTAAGCCAGGCTCTATCACGATATCA
TCTTGCCTGGATCGTCATAGACTGCATTCCACCTATTAAATTGAGTCTTT
TTGAGCACGGGCTTACTGAACTTTGCCTACGACCATCCACGTTGCCAAGG
TATGACCTCGTTTCAAGGTGGTCTTCAATTCATATATACTTGTAGTTCCG
TTCCTGCCAGAAGCGGCCACCTCAACGTGGAATACGCCGGAACCCGTCCG
CTCTCCGAAGCTAAGCGCGTTCGAGTCCCAATAGTACTGCCGTGGGTGAC
CAGGCTGGAAGGTGGGATGTCGCTTCTTTTTGACTTTTTGGGAGCATTTA
CCCTACAGGAAGACCGCTTGGCAAGCTAAAACTTTCCTTTCCAGCGTAAT
TTTTGAGCAACAAGGATTGTCAAACCATACAAAGGTCCCCTTCAATGATC
GAAGGTACGAGCAGAAACTTGCAACAGAAAAGAACGCATCACATATTGAG
TCTGCAGCTATGAAAAATGCATAGGGGCCGTGGAGGCAGAGACTTTTGAG
CCCCAAGCGAAACGTAACTTACAAGATGGTAGAGGAGCAACAGCATCATT
CCCTCGTGAAACGCGTCAGCCCTTGATGCACAAAGAAACATTATTTTTTT
AAGCCAGGCTCTATCACGATATCATCTTGCCTGGATCGTCATAGACTGCA
TTCCACCTATTAAATTGAGTCTTTTTGAGCACGGGCTTACTGAACTTTGC
CTACGACCATCCACGTTGCCAAGGTATGACCTCGTTTCAAGGTGGTCTTC
AATTCATATATACTTGTAGTTCCGTTCCTGCCAGAAGCGGCCACCTCAAC
GTGGAATACGCCGGAACCCGTCCGCTCTCCGAAGCTAAGCGCGTTCGAGT
CCCAATAGTACTGCCGTGGGTGACCAGGCTGGAAGGTGGGATGTCGCTTC
TTTTTGACTTTTTGGGAGCATTTACCCTACAGGAAGACCGCTTGGCAAGC
TAAAACTTTCCTTTCCAGCGTAATTTTTGAGCAACAAGGATTGTCAAACC
ATACAAAGGTCCCCTTCAATGATCGAAGGTACGAGCAGAAACTTGCAACA
GAAAAGAACGCATCACATATTGAGTCTGCAGCTATGAAAAATGCATAGGG
GCCGTGGAGGCAGAGACTTTTGAGCCCCAAGCGAAACGTAACTTACAAGA
TGGTAGAGGAGCAACAGCATCATTCCCTCGTGAAACGCGTCAGCCCTTGA
TGCACAAAGAAACATTATTTTTTTAAGCCAGGCTCTATCACGATATCATC
TTGCCTGGATCGTCATAGACTGCATTCCACCTATTAAATTGAGTCTTTTT
GAGCACGGGCTTACTGAACTTTGCCTACGACCATCCACGTTGCCAAGGTA
TGACCTCGTTTCAAGGTGGTCTTCAATTCATATATACTTGTAGTTCCGTT
CCTGCCAGAAGCGGCCACCTCAACGTGGAATACGCCGGAACCCGTCCGCT
CTCCGAAGCTAAGCGCGTTCGAGTCCCAATAGTACTGCCGTGGGTGACCA
GGCTGGAAGGTGGGATGTCGCTTCTTTTTGACTTTTTGGGAGCATTTACC
CTACAGGAAGACCGCTTGGCAAGCTAAAACTTTCCTTTCCAGCGTAATTT
TTGAGCAACAAGGATTGTCAAACCATACAAAGGTCCCCTTCAATGATCGA
AGGTACGAGCAGAAACTTGCAACAGAAAAGAACGCATCACATATTGAGTC
TGCAGCTATGAAAAATGCATAGGGGCCGTGGAGGCAGAGACTTTTGAGCC
CCAAGCGAAACGTAACTTACAAGATGGTAGAGGAGCAACAGCATCATTCC
CTCGTGAAACGCGTCAGCCCTTGATGCACAAAGAAACATTATTTTTTTAA
GCCAGGCTCTATCACGATATCATCTTGCCTGGATCGTCATAGACTGCATT
CCACCTATTAAATTGAGTCTTTTTGAGCACGGGCTTACTGAACTTTGCCT
ACGACCATCCACGTTGCCAAGGTATGACCTCGTTTCAAGGTGGTCTTCAA
TTCATATATACTTGTAGTTCCGTTCCTGCCAGAAGCGGCCACCTCAACGT
GGAATACGCCGGAACCCGTCCGCTCTCCGAAGCTAAGCGCGTTCGAGTCC
CAATAGTACTGCCGTGGGTGACCAGGCTGGAAGGTGGGATGTCGCTTCTT
TTTGACTTTTTGGGAGCATTTACCCTACAGGAAGACCGCTTGGCAAGCTA
AAACTTTCCTTTCCAGCGTAATTTTTGAGCAACAAGGATTGTCAAACCAT
ACAAAGGTCCCCTTCAATGATCGAAGGTACGAGCAGAAACTTGCAACAGA
AAAGAACGCATCACATATTGAGTCTGCAGCTATGAAAAATGCATAGGGGC
CGTGGAGGCAGAGACTTTTGAGCCCCAAGCGAAACGTAACTTACAAGATG
GTAGAGGAGCAACAGCATCATTCCCTCGTGAAACGCGTCAGCCCTTGATG
CACAAAGAAACATTATTTTTTTAAGCCAGGCTCTATCACGATATCATCTT
GCCTGGATCGTCATAGACTGCATTCCACCTATTAAATTGAGTCTTTTTGA
GCACGGGCTTACTGAACTTTGCCTACGACCATCCACGTTGCCAAGGTATG
ACCTCGTTTCAAGGTGGTCTTCAATTCATATATACTTGTAGTTCCGTTCC
TGCCAGAAGCGGCCACCTCAACGTGGAATACGCCGGAACCCGTCCGCTCT
CCGAAGCTAAGCGCGTTCGAGTCCCAATAGTACTGCCGTGGGTGACCAGG
CTGGAAGGTGGGATGTCGCTTCTTTTTGACTTTTTGGGAGCATTTACCCT
ACAGGAAGACCGCTTGGCAAGCTAAAACTTTCCTTTCCAGCGTAATTTTT
GAGCAACAAGGATTGTCAAACCATACAAAGGTCCCCTTCAATGATCGAAG
GTACGAGCAGAAACTTGCAACAGAAAAGAACGCATCACATATTGAGTCTG
CAGCTATGAAAAATGCATAGGGGCCGTGGAGGCAGAGACTTTTGAGCCCC
AAGCGAAACGTAACTTACAAGATGGTAGAGGAGCAACAGCATCATTCCCT
CGTGAAACGCGTCAGCCCTTGATGCACAAAGAAACATTATTTTTTTAAGC
CAGGCTCTATCACGATATCATCTTGCCTGGATCGTCATAGACTGCATTCC
ACCTATTAAATTGAGTCTTTTTGAGCACGGGCTTACTGAACTTTGCCTAC
GACCATCCACGTTGCCAAGGTATGACCTCGTTTCAAGGTGGTCTTCAATT
CATATATACTTGTAGTTCCGTTCCTGCCAGAAGCGGCCACCTCAACGTGG
AATACGCCGGAACCCGTCCGCTCTCCGAAGCTAAGCGCGTTCGAGTCCCA
ATAGTACTGCCGTGGGTGACCAGGCTGGAAGGTGGGATGTCGCTTCTTTT
TGACTTTTTGGGAGCATTTACCCTACAGGAAGACCGCTTGGCAAGCTAAA
ACTTTCCTTTCCAGCGTAATTTTTGAGCAACAAGGATTGTCAAACCATAC
AAAGGTCCCCTTCAATGATCGAAGGTACGAGCAGAAACTTGCAACAGAAA
AGAACGCATCACATATTGAGTCTGCAGCTATGAAAAATGCAT back to top
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