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Properties
| Property Name | Value |
|---|
| Product | transmembrane protein |
| Orig transcript id | gnl|cribi|Naga_100687g1.9506.mrna |
| Orig protein id | gnl|cribi|Naga_100687g1.9506 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:49769..51912 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7682 ID=rna7682|Name=rna7682|organism=Nannochloropsis gaditana|type=mRNA|length=354bp
ATGGATGCAGCCGTACTCTCGTCGCGCTTCCTAGAAAGTGGACGTCAAAG
ATGCCCTCTTTTTCTACGCGCGTCTCCGTCCCTTCCCATCACCTATACCT
GTGTGTCATCTTCGTCTTTGCCTCGGCGCTCCGTGCCACGGCCGACCCCT
TTCTTCTACGCGGCGACGCCTCGTCCACGAAGGCTGTCTTGGAGCGACAA
AAGCAATGGGTGGGTATTGACGAATACGGGAAAGCAGCCCAAAAAGACGC
AAGCTGGCCACAGGACGTGCCGCAATATCGTGGGGTCAACCTCGGGGGCT
GGCTCGTCATTGAAAGCTGGATGGGGAGGCCCAATTCAACGCGCGCCTGG
GTAG back to topprotein sequence of rna7682 >rna7682-protein ID=rna7682-protein|Name=rna7682|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
MGSNAKGKTSFLGNVLTPSFYLVLLTALTTSYHYLSSHHAEVDSYLGGPR
VRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAAT
MAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLL
GYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVGELGRRMLG back to topmRNA from alignment at CM002473.1:49769..51912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7682 ID=rna7682|Name=rna7682|organism=Nannochloropsis gaditana|type=mRNA|length=2144bp|location=Sequence derived from alignment at CM002473.1:49769..51912+ (Nannochloropsis gaditana)
tcccttctcccctcctccagtcCCTGGGACGCGTCAACATCCAAACCTTC
GACCAGAGCGATTTGGAGATCGATAACAGCCTCAACAACCTGCACTCCCC
CTGGAgctacctctccctcctcacggACGGCATTGCGAGCCCGAATTTAG
CCGAAGCCACGGCCTCGTGCTGAGCATAAGAGGCTAGGAACGAGCATCAT
AGGGGTTTCATTtagaaatggaaaaggaaagaggatagATAGTAGACGGG
AAGGATGGAAACGGGGGTAAAGCCTCTTTAAttagcagaggaggaagggt
aaaaaaagggaagagagggcggaaaaATTAGGGACGAAGTGCacggagaa
aaagagagcggGAAAACAAAGGGGGTTTgcagaagggggaaagaaagtga
cCTAAAGATTTGGAGGTCGGTCAAAAAGAATGAAGTGGATGTATTTCAAA
TATTCGGCTCAAGGATGGGCCGCTAACTGTGGTGTCTCTCCAAATGAAAG
TTTCAAATCGTTATTATGATTTCAAGGCCATCGTGAATGCATAGTACAGG
AGTAGGAAGGCTGGTTGACTGCTTATCTATTTGTTCTAAAAAGACACTTT
CTGCTTTTTGTTGAAGATGCTTTTACGACGCCTCCGAGCACAAATCGAAC
GAGTCTCCCATTTTTATACAAAGGAGTCCGACGACACACTAACATTTAAG
CACATGTAGCTGCATGCTCAAGCTTCGTGTCTTTTTGAGAAGGATTCAGA
CCCAAAAAAAGTCCGCAGTGCGGCAACAggataacctcctcccccccgct
ttaGCTCAACTTACCAAATAGCACTGACCGCATAGTTGACAACGCTGACC
TTAATCCCAACTCGACATTGCCCCGCTGCAGGCCTGCGTTACATCAAGCA
ATTATGGGTTCCAACGCGAAGGGGAAAACATCCTTTCTCGGGAACGTTCT
GACGCCTTCGTTttaccttgtcctccttaCCGCCCTCACGACCTCCTACC
ACTACTTATCTTCCCACCACGCTGAAGTGGATTCCTACCTCGGCGGACCA
CGCGTCCGGAGTTTCGAGAATTTTGAGACATTTTACAAGCGGGTGTACAG
GTGCGAGCGGGGTTGGAGTTGGAGGACGCCGTGGGACGAAGGGCCTTATC
GGATGTGGGATCGCGGGATCTGCCCAAGGTTCACGCATTGTATCCAAGTC
TGCAATGTCCAAACGCCTGAGTGGCTGAGACATGTCTCCCAAATTTTCCC
TTGTGCACCTTTtattttcctttctgtcGCAATTTTTCGGTTTCTGACAC
CCGCCTCCCCGGCGCCCTCTTGTCTctgttttcttcttcctgcgaGCGTA
CATAGTCCAAAGTACCAAGCCCCATATCCATGCATGTATTTGAAACCTCT
CTGTCCACACTCTCCACCCCCTTGGtggccgcccctcccccccccccttc
tctatCTCAGGGAGCAGCACGCTGACGATCACAACCGTTACTTGCATTTC
TTCGGGACTACCCTCGTCTTGGCTTACGCGGCCTCGGAGCCCTTACTCCT
GGTCGCCGCCAcgatggcggtggtggtggggctgAATGTGTATGAACTCA
CGTACATGGTAAGGCAAAAGGTGGAGTTAGGGAAGAATTTGGCATGAGAA
AGGGCGGATGATATCCATTTATTCCTTTTCAAATGATTGACTCATGGATT
GCACCTACGGAAAATTCAATCCCCGTATCttatccctctccttctctctc
cccagTTCAAGCACGGTGCCCTGGAAGGCGCCGCCATGCTTCTCACCTAC
CTCGTCCTCAGCCGTGCCCTCCTTCGGTCCCTCTcacggcccctccttcc
cctcctccttggctaCGGCTGCGCATGGATGGGTCATTTCTTCCTGGAAG
GGAACAAACCAGCCACTTTCACGTACGCGGTCTTCTCTTTCATGGGCGAC
TTCCGAATGTGGTGGGAGACAGTAGGGGAGTTGGGGCGTCGGATGCTCGG
ATGACACATCCCTTGGGAGGTTGAATGTGGGAAAAGGGTGAAAGAACGAA
TGCAGGGgctgtggagggagcgggacgaAGGATCGATTTCTCAGGGTGTC
CGTAAGGCATgtaaaaaaaataaaataagCTGGAAGGACGATAT back to topCoding sequence (CDS) from alignment at CM002473.1:49769..51912+ >rna7682 ID=rna7682|Name=rna7682|organism=Nannochloropsis gaditana|type=CDS|length=1782bp|location=Sequence derived from alignment at CM002473.1:49769..51912+ (Nannochloropsis gaditana)
ATGGGTTCCAACGCGAAGGGGAAAACATCCTTTCTCGGGAACGTTCTGAC
GCCTTCGTTttaccttgtcctccttaCCGCCCTCACGACCTCCTACCACT
ACTTATCTTCCCACCACGCTGAAGTGGATTCCTACCTCGGCGGACCACGC
GTCCGGAGTTTCGAGAATTTTGAGACATTTTACAAGCGGGTGTACAGGGA
GCAGCACGCTGACGATCACAACCGTTACTTGCATTTCTTCGGGACTACCC
TCGTCTTGGCTTACGCGGCCTCGGAGCCCTTACTCCTGGTCGCCGCCAcg
atggcggtggtggtggggctgAATGTGTATGAACTCACGTACATGTTCAA
GCACGGTGCCCTGGAAGGCGCCGCCATGCTTCTCACCTACCTCGTCCTCA
GCCGTGCCCTCCTTCGGTCCCTCTcacggcccctccttcccctcctcctt
ggctaCGGCTGCGCATGGATGGGTCATTTCTTCCTGGAAGGGAACAAACC
AGCCACTTTCACGTACGCGGTCTTCTCTTTCATGGGCGACTTCCGAATGT
GGTGGGAGACAGTAGGGGAGTTGGGGCGTCGGATGCTCGGATGAATGGGT
TCCAACGCGAAGGGGAAAACATCCTTTCTCGGGAACGTTCTGACGCCTTC
GTTttaccttgtcctccttaCCGCCCTCACGACCTCCTACCACTACTTAT
CTTCCCACCACGCTGAAGTGGATTCCTACCTCGGCGGACCACGCGTCCGG
AGTTTCGAGAATTTTGAGACATTTTACAAGCGGGTGTACAGGGAGCAGCA
CGCTGACGATCACAACCGTTACTTGCATTTCTTCGGGACTACCCTCGTCT
TGGCTTACGCGGCCTCGGAGCCCTTACTCCTGGTCGCCGCCAcgatggcg
gtggtggtggggctgAATGTGTATGAACTCACGTACATGTTCAAGCACGG
TGCCCTGGAAGGCGCCGCCATGCTTCTCACCTACCTCGTCCTCAGCCGTG
CCCTCCTTCGGTCCCTCTcacggcccctccttcccctcctccttggctaC
GGCTGCGCATGGATGGGTCATTTCTTCCTGGAAGGGAACAAACCAGCCAC
TTTCACGTACGCGGTCTTCTCTTTCATGGGCGACTTCCGAATGTGGTGGG
AGACAGTAGGGGAGTTGGGGCGTCGGATGCTCGGATGAATGGGTTCCAAC
GCGAAGGGGAAAACATCCTTTCTCGGGAACGTTCTGACGCCTTCGTTtta
ccttgtcctccttaCCGCCCTCACGACCTCCTACCACTACTTATCTTCCC
ACCACGCTGAAGTGGATTCCTACCTCGGCGGACCACGCGTCCGGAGTTTC
GAGAATTTTGAGACATTTTACAAGCGGGTGTACAGGGAGCAGCACGCTGA
CGATCACAACCGTTACTTGCATTTCTTCGGGACTACCCTCGTCTTGGCTT
ACGCGGCCTCGGAGCCCTTACTCCTGGTCGCCGCCAcgatggcggtggtg
gtggggctgAATGTGTATGAACTCACGTACATGTTCAAGCACGGTGCCCT
GGAAGGCGCCGCCATGCTTCTCACCTACCTCGTCCTCAGCCGTGCCCTCC
TTCGGTCCCTCTcacggcccctccttcccctcctccttggctaCGGCTGC
GCATGGATGGGTCATTTCTTCCTGGAAGGGAACAAACCAGCCACTTTCAC
GTACGCGGTCTTCTCTTTCATGGGCGACTTCCGAATGTGGTGGGAGACAG
TAGGGGAGTTGGGGCGTCGGATGCTCGGATGA back to top
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