EWM23011.1, cds7662 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|585103795|gb|EWM23011.1| (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 399.438 bits (1025), Expect = 9.271e-141 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query: 1 MGSNAKGKTSFLGNVLTPSFYLVLLTALTTSYHYLSSHHAEVDSYLGGPRVRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVGELGRRMLG 197
MGSNAKGKTSFLGNVLTPSFYLVLLTALTTSYHYLSSHHAEVDSYLGGPRVRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVGELGRRMLG
Sbjct: 1 MGSNAKGKTSFLGNVLTPSFYLVLLTALTTSYHYLSSHHAEVDSYLGGPRVRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVGELGRRMLG 197
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|514700880|ref|XP_004998008.1| (hypothetical protein PTSG_11825 [Salpingoeca rosetta] >gi|326433482|gb|EGD79052.1| hypothetical protein PTSG_11825 [Salpingoeca rosetta]) HSP 1 Score: 98.9821 bits (245), Expect = 3.462e-22 Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 0
Query: 52 RSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVGEL 191
+ ++ F FY Y+E+H D R LH GT++VL A+ P V+ +A VV L +GA E A M+ + L RS+ L+ +L+GY AW+GHFF E NKPATF Y FS M DF M + + ++
Sbjct: 76 KPYKTFMDFYP-YYQEEHTDKTCRLLHIIGTSIVLTIMAASPSTFVSMALAFVVAYACCGLFAFMPNGAAEAAVMVTVFFSTHYFLKRSIKLALVVMLVGYAFAWVGHFFFEQNKPATFIYPSFSLMSDFFMTFRVITQV 214
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|167535617|ref|XP_001749482.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772110|gb|EDQ85767.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 88.9669 bits (219), Expect = 3.364e-18 Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 0
Query: 51 VRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYA-ASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRM 183
++ + F FY Y +H D R LH GT+L+ A S P+ VA +A VG L G +EG M+ T+L+ R + + L +L+GY AW+GHFF E N+PATF Y FS MGD+RM
Sbjct: 102 LKPYTTFTEFYTH-YASEHRDHTCRLLHIVGTSLITATVLISSPVTFVAMGLAGAVGYIACGLLAAAPSGIVEGVLMIGTFLLAHRIMTGNYKMALFVVLVGYSFAWVGHFFFEMNRPATFIYPSFSLMGDYRM 234
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|569357195|gb|ETO06670.1| (hypothetical protein RFI_30722 [Reticulomyxa filosa]) HSP 1 Score: 80.1073 bits (196), Expect = 1.680e-14 Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 0
Query: 52 RSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMW---WETV 188
+ + NF F+ E RY H GTT+V A P +++ ++ G + + + GA E A M L+ +L+ LL L+GYGCAW+GHF E NKPATF Y FS M D+++W W+ V
Sbjct: 71 KPYGNFSDFWPYYMTEHSTLICQRY-HIVGTTIVATIFAISPQTMISVGNGMLAGYLSFPIFRGMEFGAAEAAVMCAIALICGH-MLKCKKYILLCALVGYGCAWVGHFVYEHNKPATFIYPSFSLMSDWKLWALFWKKV 208
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|1061474084|gb|ODM92362.1| (hypothetical protein Ocin01_14319 [Orchesella cincta]) HSP 1 Score: 75.485 bits (184), Expect = 2.990e-14 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0
Query: 123 GAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVGELGRRML 196
+ M+L Y LS + +L LL L+ GYG AW+GHFF E NKPATF + ++SFMGDF +WWE + GRR
Sbjct: 49 NSIMILLYAFLSTSP-HTLPLILLALVQGYGLAWIGHFFFEKNKPATFNHPIYSFMGDFCLWWEVIS--GRRQF 119
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|1069899619|ref|XP_018265867.1| (hypothetical protein I303_02243 [Kwoniella dejecticola CBS 10117] >gi|1039714161|gb|OBR88025.1| hypothetical protein I303_02243 [Kwoniella dejecticola CBS 10117]) HSP 1 Score: 76.2554 bits (186), Expect = 5.167e-14 Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = 0
Query: 54 FENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASE-----PLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRAL-LRSLSRPLLPLLLG-YGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETV 188
F++F++FY +Y +HA R LH GT++ LA A P LL +A ++ ++ L +L +L + ++ L L + R LL ++G Y AW+GHFF+E N+PATF Y V+S GD +MWWE V
Sbjct: 24 FQSFQSFYP-LYLGEHAKPLTRRLHLAGTSIALASFARSTLSLVPNLLASAAKSLPASQGIHALHNKGFIVSLGLDVILAKWSYDTQFLELEGVGRWLLGGVVGAYAFAWIGHFFIEKNRPATFKYPVWSLRGDLKMWWEVV 164
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|918235382|ref|WP_052367354.1| (DUF962 family protein [Algiphilus aromaticivorans]) HSP 1 Score: 73.559 bits (179), Expect = 8.923e-14 Identity = 49/139 (35.25%), Postives = 66/139 (47.48%), Query Frame = 0
Query: 53 SFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLP--LLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETVG 189
SF +F+ FY Y E+H++ NR LHF GT+L L + VVG+ ++L L+P L++GY AW+GHFF E NKPATF Y S+ GD+RMWWET+
Sbjct: 7 SFRDFDEFYA-YYLEEHSNRTNRRLHFVGTSLGL--------------LLFVVGIVTFQLW-------------------------------LIPAALVVGYAFAWVGHFFFEQNKPATFKYPWQSYKGDWRMWWETLA 99
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|1183503671|gb|ORZ27269.1| (hypothetical protein BCR41DRAFT_331934 [Lobosporangium transversale]) HSP 1 Score: 73.9442 bits (180), Expect = 1.211e-13 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0
Query: 50 RVRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETV 188
+V + +FE FY Y +H + NR LH F TT V+A +L YLV++R L + LL GYG AW+GHF E NKPATF + ++SFMGD++MW+E +
Sbjct: 21 KVGGYSSFEEFYP-YYLSEHCNPINRRLHLFATTNVVA---------------------------------------ILGYLVMTR----QLRFWWVTLLQGYGLAWVGHFIFEKNKPATFKHPIYSFMGDWKMWYEVI 115
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|1154849157|ref|WP_078756695.1| (DUF962 domain-containing protein [Lysobacter spongiicola] >gi|1152122788|emb|SJZ53871.1| hypothetical protein SAMN02745674_00009 [Lysobacter spongiicola DSM 21749]) HSP 1 Score: 72.0182 bits (175), Expect = 4.235e-13 Identity = 49/141 (34.75%), Postives = 68/141 (48.23%), Query Frame = 0
Query: 48 GPRVRSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWETV 188
G R R+F F FY +H +R LHF GTTLVL +L+VAA T+ +L+ AL+++ YG AW+GHFF E N+PATF Y ++S +GD+RMWW+T+
Sbjct: 4 GKRFRTFREFYPFYL----SEHGHPVSRRLHFVGTTLVL-------VLVVAAISTQ-------------------------TWWLLAVALVQA-----------YGFAWIGHFFFEHNRPATFKYPLYSLVGDWRMWWDTL 97
BLAST of EWM23011.1 vs. NCBI_GenBank
Match: gi|829196603|ref|XP_001026158.2| (transmembrane protein [Tetrahymena thermophila SB210] >gi|586725703|gb|EAS05913.2| transmembrane protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 72.0182 bits (175), Expect = 4.402e-13 Identity = 46/135 (34.07%), Postives = 64/135 (47.41%), Query Frame = 0
Query: 52 RSFENFETFYKRVYREQHADDHNRYLHFFGTTLVLAYAASEPLLLVAATMAVVVGLNVYELTYMFKHGALEGAAMLLTYLVLSRALLRSLSRPLLPLLLGYGCAWMGHFFLEGNKPATFTYAVFSFMGDFRMWWE 186
+ + NF+ FY Y QH++ NR LH+ GTT+ +M+L V+S L + PL+ ++ GY AW+GHFF E NKPATF Y V SFMGDF+MW++
Sbjct: 9 KIYTNFQDFYP-FYLSQHSNIINRRLHYIGTTI----------------------------------------SMML--FVISILLTQYQYLPLV-IVSGYAFAWVGHFFFEKNKPATFKYPVMSFMGDFKMWYQ 99 The following BLAST results are available for this feature:
BLAST of EWM23011.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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