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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101866g1.8522.mrna |
| Orig protein id | gnl|cribi|Naga_101866g1.8522 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:473172..474630 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7649 ID=rna7649|Name=rna7649|organism=Nannochloropsis gaditana|type=mRNA|length=3699bp
CCCCTCCCTCCGCTCCCCCCGCTGTGGATACCTCCGATTCTACCACCACC
AGTGCCTCCTCCTCTTCTTCCCCTGTCGTGGCTTCCTGCTCTCAAACATC
GGAGCAAGTCCCGCACGTCTCCCTCTTCCTCGTCTCTGCGGACCCGCTTC
CCGCCCCCCCGCCCCCGGGCCTCCTTCCCCTTCTCAATCCCGTCGCCGCC
CCCTCCCCCGCCCCCTCCACTGGCACCTCTCTCCAGCCCTCCTTCCACGC
CGCGGTCCCTCCCTCTCTCCACGCTTCCACGCCGGTGGGCTGCATCTATG
AATTTCTCTGGGGGTTGGCGAGGGAGGTGGCGGAGGAGGAGGGAGGGAAG
GATGCCTTGCCGCTTCTGCCGCTGGGTCGCTGCTGCCCTCCCCAGGGGCC
CGAAGGCAAGCCCGCCTCTGTCCAGGAGAAAGACGTATTGGTGGTGCTGG
AGAGAGAGATGGACGCCTTCTTTGGGGACGCGGTGGGGCGCATCGGCCTG
CTCGTGCAGCGACGGCGGACGGTGGCACGCTTACAGCATGAGGAGGAATC
CTTGGTGCGCACTCTTTTGCACCACTACAGTGTTAAGGTTGACCACCAGT
CGTTGCTTTTGCAGATGCAGCGCCTGGATGAGGCGAGGGAGAAGGGGGAG
GTGGGAGGTAAGCACGCGCATGCCGGCAATGCGCAGGATCTCCCCAGTCT
AACTCCCTCGTTTCCCTTTCCCTCCGTGCTCTCCCGCCACCCCCAGCCAT
AGACTTGCTCTCCTTCCCTCCCTCTGCCCTGCCCTCCTCCCCACTTCAAG
GAGAGGAGGAAGGCCCCGTTCAAGACGTGAGGGAGGGGGAGAGGGAGGGA
GAGAGGGAGGGGCGCCCCTCTCGGTCGGCCCCGGCTCAGCTGTCGAACAA
GAAGGGAGGAGGGAGCAAGCACAAAGTTGCCGCTCTCAACACTTCCCTCC
CTACCTCCTCCTCCTCCTCGACCACGCCCACCCCTGCCTCTGCCCGTGTG
AAGGGGAGGGCGGTCATCCCCCTCCTCCGTATTCCCGCCCCCATCGCCTC
TTCCTCCTCCTCCTCTTCTTCGTCAACGGGTCGAGGCCGGAGTGCCAGCG
AAGGAGGCGCCCTATCCTCTTCCTCGAGCCCGTACCCGTTCAAACGACGC
AAACGATCCTCCTCCAGCGTCAGCGACATCCCCCCCGCCCTGGTGGCGGG
CTACCTCCGGCCCTCGCCCTCCCCCTTCCGAGACGAGAAGGAAAAGCTTC
GGCATCTAGAAGGTCTGACGGTGGAAGAGCTGCAACGGAAAGCGCGAAAG
CGGGGCCAAATCCGGGCGGGATCGTGGGGGGGGAGCGGGGTCTCCCACGT
GGACGGGAGGGAGGGAGGGAGAGAGGGAGGGGTGACTCCCAAAGGGGGGT
ACGGCGGGGAAGGAGGAAGGGACGGCGGACTGAGCGTCTGGGCGAGTTTG
GAAGAGATGGCGGTGTCCTTCGCGCCCGTGAACAACACAAGCAAGCGGCC
GCTGGCACCCGTACCCCTGGAGAAGGGGGGCATGCCCTGGCAAAGCGTGC
TGGCCACCAAGGGGGCCTTGGCGGCCCTGGATCAGGCTGCCGACCGGCTC
CTTCCTCCCGTCCTCCCCCGCGGCCTCCGGGGGAAGGGAGGGGTGGACGA
CGTGGAGGAGTTGACTCGGACGCAGCCGTTGCAGTGGAGCCACGTTCTGG
GGCAGTTTCAGGTGGTGCCCTGCAGCAACGGCCAGGCGGGGTCTTCCCTC
CAGCCCGCCCTCCCTCCCGCCCTGTTCGCGGTGGAAGGGCGGAGGGAGGG
GTTGGAGGCGGGGAGGGTAGAGGGGGAGGCAGGGGTGACACGGACTCGCA
GCAGGCGTGCGATGTCTCGGGGGGAGAGAGGGGAGGCAGACCGTGGGAAC
GGCCTCGGGAGCTTGGAGGGGCGTCCGAAGGCTTCCGGTGTAACGGGCGC
GACGGAGAGGGAGGACGGGAACGAGGAGAGGGAGGCAGATAGCTGCAACC
CAGAGGGCGACTTCCCGCTCTCCCTCGTGCAGAGTGAGATTCCCGCCCCG
ACATTCCGAAGGCTCGATTCTCCGGAGGCGGCGGTGGAGGGGGGGGAGGG
GAGGGAGAGGGAGGAAGGGAGGGAGGAGAAGGAGGGGGAGGAAGAGGGGG
AGGAGGAAGAAGAGGAAGACATCTCGGATGAAGCCATTTTGGCCCGACAT
GAAGAGACCCTGAAGCAGATATGGGAAAGGTATGCGCGGTGGCGCGAGTT
AAGAAAACGTCAACGCCCCCCCCGCCCACCGGTCCACTCACGGTCATCAC
CGTTCTTCCTCCTCCGCCCTCTCCTCCTTGTCCGCGTCGAAGAATGCGTC
GAGGCGCCGACAGAGGAATGGGAGGGTGAGGAGAAAGACGGTAGGTGCAG
CGGCAGCAGCAGTTGCGGCGGCAGCTGCGGCAGCTGCCGCCGCTACTGGC
GTTGGCTCGCACCCTGTGGAAGAAAACGAAGGGAGCGCAGAAGTGGAGAG
TGCTGGGGAGAAGGTAGAGGAAGGGGGGGAAGGGAGGACAGAGGTCACAT
CTTCCTCCCTGGTCGGGGTTGTCGGTCAGGAAGGGAAGGAGGAAGGGCAG
GAGGAGAGGAAGGAAGAGGAAGGAAAACAAGGCGAGGGCGAGGAGACCCC
CGTCCTGCTCGGTTCCCCTCCTTCCTCCACCTCCTCCTCGATCTCGGCTT
CCATAAGCGAAGAAGGGAGGGAGTGTGGCGAGGAAGGGGAGGAGAACAGC
GTCTCCTCTTCCTCCTCCTCCACCTCCTCACTCAGCGGGCGGGAGGTAGC
GGGAAGGGAGGCGAGGAGTATGGAGAACTCGAAGCGGAGGAGGATCATGT
TGAGGGAAGAGGGGTCTGTGGAAGGGAGGGCGCGAGGGAGGGCGGATAGC
CGTGAGCTGAAGATTTCCTCTGTACGGGCCTCGCAACCTCAATGAGGATG
GGAAGATTCTATGCGCTTTCTTGCGTTTTCCTACCTCCCTTCATTCTACC
TCCCGTCGCTCAAAGCGGCGAAACAGGGGTGTATGGAAGTTTTTTTGGGG
GGGGGTCGGTGATCAGGGCAAAGCGGTGGTATGGCGGGGCCGGAGGGAAG
GGAAGAAGGAATGGAATGTGGCATATGTTGTGATAAGGAAGACAAAGGCG
GCGTGGGGATTCACGCCGGAGAAAGAAAATCCATGTATTGTAAAGCGGTG
GAGAGGTCCCTTGGAGAGGTGCCATGCCAGGAACGACGCCTGCCTGTGTG
ACGCATTGTGGAGGCGAGAGATCGAATTGTCGTCTCCGACAGTGATCACG
GTCCCTCCACAGAGCAGGGAAAAGTTAGGGAAGGCACCTTTGGGAATGCA
AAGAGGAGAGCGGAGCGCCACAGAGGGTATGCCGGAGGACGGCCGCCTGA
TATCGATGTAGGAGGTAAAGACGCGGTAAATGGGTGCAGGGGGACGGGGA
GGGAGGTATTTTGAGCGAAGCCAGGAGGGCGAATCAAGGCCTGAGGACTA
TATAAAATGAGAGAGACAGTGTGGTAGCTGGCGCTTGAAATTTTGCACCC
GTGGCGGTATGCTGCCGGAATGGGTACCTAAACCATCATACTCAAACTGC
AGGAAGATGACGGAGACAAGGGTCTCGGCTAATGATTTGAACAAAGAAGG
AAGTCACGTCAAGCTTGAAAAGCGACAGAATGGATAAGAAGAAGCAGCC back to topprotein sequence of rna7649 >rna7649-protein ID=rna7649-protein|Name=rna7649|organism=Nannochloropsis gaditana|type=polypeptide|length=224bp
MASPDEAHGVQGAREGGREGKGYHSQYYYQPQPPQPPPPSQKKRRLPAEI
ITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGK
EAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKEELVTAGEIRAVARILKGI
GLVSFASVKNPPPPRPPPSSSLSASSTSLPPSLSVLLSSLVRLERQRHRD
HPLPLPNTPKEETDAARPPSLPSS back to topmRNA from alignment at CM002472.1:473172..474630- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7649 ID=rna7649|Name=rna7649|organism=Nannochloropsis gaditana|type=mRNA|length=1459bp|location=Sequence derived from alignment at CM002472.1:473172..474630- (Nannochloropsis gaditana)
CCCCCCCCCCCCTGCCTCCTTCCCCTCCCCCTCGCCATACCCGCCCTCCC
CCCTCCACGCGTCGTACTACCCGCACCCAGCCTACCTGCCTGTGCATCCC
TACCATCACCCCTACTACCATCATCCTTACATGCACACCGCTGCCGCGGC
CGCGGCCGCTGCCGCCTCCGGAGCCCCTCCCTCTAGCACCTATTATCCTC
TGCATCCCTCCCTCTACCCTCACTCGAGCCCGCCCGCCCCACTGCCCTCC
CTCCCGGCAGCCCCCGCCGCGTCCTCTTCCCCTTCCGCCTCCTCCCCCGC
CCCTTTGTCCTCTCAAGCGGCTTCGACCCAGACCGATGCGACCAGCGACA
CTGCGGGCACCCCCGCCGCCTCCACGCTGTCCCCCCCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCTGTCCTTCCTGAGTTGAAGGCTAGCGGCATGGCC
TCACCGGACGAGGCGCATGGCGTGCAGGGCGCGAGGGAGGGGGGGAGGGA
GGGCAAGGGGTACCACTCCCAGTACTATTACCAGCCACAGCCGCCACAGC
CTCCGCCCCCGAGCCAGAAGAAGAGGCGGCTCCCCGCGGAGATCATCACC
AAACCCACTTCCACCAGAGGTTTGGAGCTGCTTGCCATGACCCTCGCGGT
GTTGAAAGGTGCTTCTTCCTTCCGCCCTTCCTTCCTCCTACCTTTCTTCC
CTCCTTCCTTCCGCCCCTTCCCCTCAATCTCCGATGATAACCGCAATGCC
TACTCATATTTTCTCCGGCTCCATCCTCTTCTCTCCCCCCTCCCTTATCG
TTTGCAGATGCCAAGCACCAAAGCCTCCCCCTTTGCTCCCTTGAGCGCGA
GGTCCAAGCTCGTATCTCTGCGGTGAGAGATGAGGGAGGGAAGGAGGCGG
GAAGCGAGGGAGGGGAAGGGGAGAAGGAGGGCGATAACAATACGCCCGGG
CAAAGCAACATGGCTGGAGCAGAGGTTTCGAAGAAGGAGGAGTTAGTGAC
TGCTGGCGAGATACGGTGAGGAAGAGGGAAGGAAAGAAGGAAGGAGGGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGACTGGG
TCGAGGGGAAGGGAATGGGACGGGCAGGTCTCGCACGAAGTCTCTGGATG
ATCGAGACGCACCACGTCTCCTCTCCCTCACGCTTTCCTCCTCCCTCCTT
CTCATCCAGCGCCGTGGCCCGCATCCTGAAGGGTATCGGCCTCGTCTCGT
TCGCCTCGGTGAAGAACCCCCCCCCGCCCCGGCCCCCGCCCTCCTCCTCC
CTCTCCGCGTCTTCAACCTCCCTTCCACCCTCCTTGTCCGTCCTTCTCTC
CTCCTTGGTGCGTCTGGAGCGCCAGCGTCACCGAGATCATCCTCTTCCCC
TACCCAACACGCCCAAGGAGGAAACCGACGCGGCTCGGCCTCCCTCCCTC
CCTTCCTCC back to topCoding sequence (CDS) from alignment at CM002472.1:473172..474630- >rna7649 ID=rna7649|Name=rna7649|organism=Nannochloropsis gaditana|type=CDS|length=2016bp|location=Sequence derived from alignment at CM002472.1:473172..474630- (Nannochloropsis gaditana)
CGCCGTGGCCCGCATCCTGAAGGGTATCGGCCTCGTCTCGTTCGCCTCGG
TGAAGAACCCCCCCCCGCCCCGGCCCCCGCCCTCCTCCTCCCTCTCCGCG
TCTTCAACCTCCCTTCCACCCTCCTTGTCCGTCCTTCTCTCCTCCTTGGT
GCGTCTGGAGCGCCAGCGTCACCGAGATCATCCTCTTCCCCTACCCAACA
CGCCCAAGGAGGAAACCGACGCGGCTCGGCCTCCCTCCCTCCCTTCCTCC
ATGCCAAGCACCAAAGCCTCCCCCTTTGCTCCCTTGAGCGCGAGGTCCAA
GCTCGTATCTCTGCGGTGAGAGATGAGGGAGGGAAGGAGGCGGGAAGCGA
GGGAGGGGAAGGGGAGAAGGAGGGCGATAACAATACGCCCGGGCAAAGCA
ACATGGCTGGAGCAGAGGTTTCGAAGAAGGAGGAGTTAGTGACTGCTGGC
GAGATACGATGGCCTCACCGGACGAGGCGCATGGCGTGCAGGGCGCGAGG
GAGGGGGGGAGGGAGGGCAAGGGGTACCACTCCCAGTACTATTACCAGCC
ACAGCCGCCACAGCCTCCGCCCCCGAGCCAGAAGAAGAGGCGGCTCCCCG
CGGAGATCATCACCAAACCCACTTCCACCAGAGGTTTGGAGCTGCTTGCC
ATGACCCTCGCGGTGTTGAAAGCGCCGTGGCCCGCATCCTGAAGGGTATC
GGCCTCGTCTCGTTCGCCTCGGTGAAGAACCCCCCCCCGCCCCGGCCCCC
GCCCTCCTCCTCCCTCTCCGCGTCTTCAACCTCCCTTCCACCCTCCTTGT
CCGTCCTTCTCTCCTCCTTGGTGCGTCTGGAGCGCCAGCGTCACCGAGAT
CATCCTCTTCCCCTACCCAACACGCCCAAGGAGGAAACCGACGCGGCTCG
GCCTCCCTCCCTCCCTTCCTCCATGCCAAGCACCAAAGCCTCCCCCTTTG
CTCCCTTGAGCGCGAGGTCCAAGCTCGTATCTCTGCGGTGAGAGATGAGG
GAGGGAAGGAGGCGGGAAGCGAGGGAGGGGAAGGGGAGAAGGAGGGCGAT
AACAATACGCCCGGGCAAAGCAACATGGCTGGAGCAGAGGTTTCGAAGAA
GGAGGAGTTAGTGACTGCTGGCGAGATACGATGGCCTCACCGGACGAGGC
GCATGGCGTGCAGGGCGCGAGGGAGGGGGGGAGGGAGGGCAAGGGGTACC
ACTCCCAGTACTATTACCAGCCACAGCCGCCACAGCCTCCGCCCCCGAGC
CAGAAGAAGAGGCGGCTCCCCGCGGAGATCATCACCAAACCCACTTCCAC
CAGAGGTTTGGAGCTGCTTGCCATGACCCTCGCGGTGTTGAAAGCGCCGT
GGCCCGCATCCTGAAGGGTATCGGCCTCGTCTCGTTCGCCTCGGTGAAGA
ACCCCCCCCCGCCCCGGCCCCCGCCCTCCTCCTCCCTCTCCGCGTCTTCA
ACCTCCCTTCCACCCTCCTTGTCCGTCCTTCTCTCCTCCTTGGTGCGTCT
GGAGCGCCAGCGTCACCGAGATCATCCTCTTCCCCTACCCAACACGCCCA
AGGAGGAAACCGACGCGGCTCGGCCTCCCTCCCTCCCTTCCTCCATGCCA
AGCACCAAAGCCTCCCCCTTTGCTCCCTTGAGCGCGAGGTCCAAGCTCGT
ATCTCTGCGGTGAGAGATGAGGGAGGGAAGGAGGCGGGAAGCGAGGGAGG
GGAAGGGGAGAAGGAGGGCGATAACAATACGCCCGGGCAAAGCAACATGG
CTGGAGCAGAGGTTTCGAAGAAGGAGGAGTTAGTGACTGCTGGCGAGATA
CGATGGCCTCACCGGACGAGGCGCATGGCGTGCAGGGCGCGAGGGAGGGG
GGGAGGGAGGGCAAGGGGTACCACTCCCAGTACTATTACCAGCCACAGCC
GCCACAGCCTCCGCCCCCGAGCCAGAAGAAGAGGCGGCTCCCCGCGGAGA
TCATCACCAAACCCACTTCCACCAGAGGTTTGGAGCTGCTTGCCATGACC
CTCGCGGTGTTGAAAG back to top
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