EWM23044.1, cds7629 (CDS) Nannochloropsis gaditana

Overview
NameEWM23044.1
Unique Namecds7629
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:473973..474186 -
Alignment locationCM002472.1:473616..473823 -
Alignment locationCM002472.1:473172..473421 -

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Properties
Property NameValue
Start range473172
Start range.
Protein idEWM23044.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101866g1.8522.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:473973..474186 -
CM002472.1supercontigCM002472.1:473616..473823 -
CM002472.1supercontigCM002472.1:473172..473421 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23044.1 vs. NCBI_GenBank
Match: gi|585103852|gb|EWM23044.1| (hypothetical protein Naga_101866g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 442.195 bits (1136), Expect = 8.276e-157
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 
Query:    1 MASPDEAHGVQGAREGGREGKGYHSQYYYQPQPPQPPPPSQKKRRLPAEIITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGKEAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKEELVTAGEIRAVARILKGIGLVSFASVKNPPPPRPPPSSSLSASSTSLPPSLSVLLSSLVRLERQRHRDHPLPLPNTPKEETDAARPPSLPSS 224
            MASPDEAHGVQGAREGGREGKGYHSQYYYQPQPPQPPPPSQKKRRLPAEIITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGKEAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKEELVTAGEIRAVARILKGIGLVSFASVKNPPPPRPPPSSSLSASSTSLPPSLSVLLSSLVRLERQRHRDHPLPLPNTPKEETDAARPPSLPSS
Sbjct:    1 MASPDEAHGVQGAREGGREGKGYHSQYYYQPQPPQPPPPSQKKRRLPAEIITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGKEAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKEELVTAGEIRAVARILKGIGLVSFASVKNPPPPRPPPSSSLSASSTSLPPSLSVLLSSLVRLERQRHRDHPLPLPNTPKEETDAARPPSLPSS 224
[Close]
BLAST of EWM23044.1 vs. NCBI_GenBank
Match: gi|553194318|ref|XP_005855927.1| (hypothetical protein NGA_0559500 [Nannochloropsis gaditana CCMP526] >gi|422293128|gb|EKU20428.1| hypothetical protein NGA_0559500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 181.415 bits (459), Expect = 6.437e-53
Identity = 125/178 (70.22%), Postives = 126/178 (70.79%), Query Frame = 0 
Query:   40 SQKKRRLPAEIITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGKEAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKEELVTAGEIRAVARILKGIGLVSFASVKNPPPPRPPPSSSLSASSTSLPPSLSVLLSSLVRLERQRHRDHPLPLPNTPKEETDAAR 217
            SQKKRRLPAEIITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGKEAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKE                                                    VLLSSLVRLER+RHRDHPLPLPNTPKEETDAAR
Sbjct:   48 SQKKRRLPAEIITKPTSTRGLELLAMTLAVLKDAKHQSLPLCSLEREVQARISAVRDEGGKEAGSEGGEGEKEGDNNTPGQSNMAGAEVSKKE----------------------------------------EKEGREGGXXXXVLLSSLVRLERRRHRDHPLPLPNTPKEETDAAR 185
The following BLAST results are available for this feature:
BLAST of EWM23044.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103852|gb|EWM23044.1|8.276e-157100.00hypothetical protein Naga_101866g1, partial [Nanno... [more]
gi|553194318|ref|XP_005855927.1|6.437e-5370.22hypothetical protein NGA_0559500 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7649rna7649Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications