rna7646, rna7646 (mRNA) Nannochloropsis gaditana

Overview
Namerna7646
Unique Namerna7646
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length585
Alignment locationCM002472.1:464875..466333 -

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Properties
Property NameValue
Productrna recognition motif-containing protein
Orig transcript idgnl|cribi|Naga_100570g3.9715.mrna
Orig protein idgnl|cribi|Naga_100570g3.9715
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:464875..466333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100570g3gene7405Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7646rna7646-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23046.1cds7626Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7646 ID=rna7646|Name=rna7646|organism=Nannochloropsis gaditana|type=mRNA|length=585bp
TCCCTCCCTCCCTCCCGGCCTTCCTTTCTTTCACCCCCGTTCCCTTTCTC
CTTCTGTCCCCGTCTTCACCTGTCGCTCCTCCCCTCTCTCCCTCCTTTCT
TCGTGCGAAGTCTCTCTTCCTTCGGTAGACACCTTACCCCTTACTCCTTC
ATATGCGACAACCTCGTCGAGGGTGCGGACTCTCGGGATGCTGGCCCGCC
TCTTCGTTTCCCTCTTCTCACCCCCGCCCCTCCCTCTGCCCCTCCCACCC
CACCCCTCAGGCATCTACTTCAAGGACTCAAAGTGGCGCCTGGCCGTCAA
AGTAAGGAGGCGCGAAGGCCAGAGACGGGGGAGAGGAGGGACAGGGCTCT
GATGTCGGCAGTACCCTTCTCTTGGCCCCTTTCCCTTCTTCAGTTAGCCA
ACCCCCGTTTGCATACCCCTCCCTCTTTCTCTCCTCTTTCCACCCGTCTG
TCTCCCCTCCTAGGCGGCCAAGCCCGTGAAGGAGCGCGAGGAAAGAGGTC
GCAGTCGCAGCCCTCCTCGCGGACGAGGTGGGGAAGGAGGGCAGGAGAAG
AGAGTATCTGCCCGGTCGAGTCATTTTTACATTGA
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protein sequence of rna7646

>rna7646-protein ID=rna7646-protein|Name=rna7646|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MSLIGFKLFIGNLSKETHDTGLEKYFKDAIGGEIVWAQVCKDRNTGESKR
YGFITFKDEADGKRAIEELHETELDGSKITVDRSTQGMIEKDGGGRGAED
ENVRLFVGGLPDNCVEEDLME
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mRNA from alignment at CM002472.1:464875..466333-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7646 ID=rna7646|Name=rna7646|organism=Nannochloropsis gaditana|type=mRNA|length=1459bp|location=Sequence derived from alignment at CM002472.1:464875..466333- (Nannochloropsis gaditana)
CCGACTCACCCGCGGTTGTGCCTTCACTTTATCATAGTCCAGGTGTGACA
CGTTGATGCGTGAGGTTGTAGCCCCACGACATGCGTCACCTGTTGTATCT
CTCTTGTGCTTTGCCTCATGAACCTTCCTCCCCTCGACTCCTCCTCCTCC
TTCTCCTCCTCCTCCTCCTCCTTTTTCCCACCTTCCCTCATTCCTTGTCC
TCTTCTCCTCACTCATCTCCGCGAAATATTCCTTCTCCTGAAGCATAGCG
TTCCCTCCCCACCTTCCTCCCGCCAACCAGCCAAGCGTGCGCTCTGGTTT
CCACTTTTTACCCTCAACTCACCCTCGGGAGAACGTCGAGGCCTCTGACC
ACCTTCCTCTCGCTTGCACGCTGTAGCCCACCTACATCTGTCCACCTCCT
CCACCAAATTCTCTTCATTCCTTCAAATATCCCAAGCACATTGCCGCACG
GCCTAGGCTACGCGTATCTGCAGCACCTGTTTTCTGCCGCTATCCCCTCC
TTATCTCCTCTTCATGTCTTTGATCGGATTTAAGCTCTTCATCGGTAACT
TGTCCAAGGAAACGCACGACACTGGGCTCGAGAAATATTTCAAGGACGCG
ATAGGCGGAGAAATAGTCTGGGCACAGGTAGGGATAGGGGCAGGTCGGCT
TCGGGAAAGACGCAGGGAAGGAACATGTGTGGGAGGAGAGGACATGGAGG
GATTGGATCGACGTAATTCGCCCACTTCCCGCTCGTTCCTTTTTTCTCCT
CGTCAACCGTCCAACTCCTACCTTCTCAGGTTTGCAAGGACCGAAACACA
GGCGAAAGTAAACGGTATGGCTTCATCACCTTTAAAGACGAGGCTGACGG
GAAGCGGGTGAGTGCCTCCTGTTCCTCTCTGCCTTTCTTGATTCTCCGTC
GCACCTGTCTATTCTAAGGTCCGGGCCTCATTGTCCAAGCTTGCGCAGGA
AGTCAAGGTGTCATTCGAGGAGCACCCGTTCCGATATCCTTCTCACCCGG
TCTCCCTCTCTCCCTTTCTCCCTCGCCTCCTCCCTGTGGGGCTCTCCAGG
CTATTGAGGAGCTGCACGAGACCGAACTCGACGGGTCCAAGATAACGGTG
GATCGTAGCACGCAAGGCATGATTGAAAAAGGTGGGAACAGACATCGGGA
GGAAGGGAAGATAGGGCGGGAGAGTCATGGTTGGATTCGGAGAAGGGGGG
GAGGGGGCAGTTGAAGACTCTCCCCGGGCCGAGGTCGTGGACCGATAATT
TCCTTCGTTCACCATTCTTTTTGTTGCACCTTGGCAGATGGCGGGGGTCG
AGGGGCGGAGGACGAGAACGTCCGGCTCTTTGTGGGCGGTCTCCCCGACA
ACTGTGTCGAGGAGGATCTGATGGAGTGAGTGGGAGGGGAGGTGGGGTTG
AAATCCTGCCTGTTGCCCCATGCGTACGAAGCTCGCTCTTGTGGCTGCCT
GACTTTTTC
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Coding sequence (CDS) from alignment at CM002472.1:464875..466333-

>rna7646 ID=rna7646|Name=rna7646|organism=Nannochloropsis gaditana|type=CDS|length=1464bp|location=Sequence derived from alignment at CM002472.1:464875..466333- (Nannochloropsis gaditana)
ATGGCGGGGGTCGAGGGGCGGAGGACGAGAACGTCCGGCTCTTTGTGGGC
GGTCTCCCCGACAACTGTGTCGAGGAGGATCTGATGGAGTGAGCTATTGA
GGAGCTGCACGAGACCGAACTCGACGGGTCCAAGATAACGGTGGATCGTA
GCACGCAAGGCATGATTGAAAAAGGTTTGCAAGGACCGAAACACAGGCGA
AAGTAAACGGTATGGCTTCATCACCTTTAAAGACGAGGCTGACGGGAAGC
GGATGTCTTTGATCGGATTTAAGCTCTTCATCGGTAACTTGTCCAAGGAA
ACGCACGACACTGGGCTCGAGAAATATTTCAAGGACGCGATAGGCGGAGA
AATAGTCTGGGCACAGATGGCGGGGGTCGAGGGGCGGAGGACGAGAACGT
CCGGCTCTTTGTGGGCGGTCTCCCCGACAACTGTGTCGAGGAGGATCTGA
TGGAGTGAGCTATTGAGGAGCTGCACGAGACCGAACTCGACGGGTCCAAG
ATAACGGTGGATCGTAGCACGCAAGGCATGATTGAAAAAGGTTTGCAAGG
ACCGAAACACAGGCGAAAGTAAACGGTATGGCTTCATCACCTTTAAAGAC
GAGGCTGACGGGAAGCGGATGTCTTTGATCGGATTTAAGCTCTTCATCGG
TAACTTGTCCAAGGAAACGCACGACACTGGGCTCGAGAAATATTTCAAGG
ACGCGATAGGCGGAGAAATAGTCTGGGCACAGATGGCGGGGGTCGAGGGG
CGGAGGACGAGAACGTCCGGCTCTTTGTGGGCGGTCTCCCCGACAACTGT
GTCGAGGAGGATCTGATGGAGTGAGCTATTGAGGAGCTGCACGAGACCGA
ACTCGACGGGTCCAAGATAACGGTGGATCGTAGCACGCAAGGCATGATTG
AAAAAGGTTTGCAAGGACCGAAACACAGGCGAAAGTAAACGGTATGGCTT
CATCACCTTTAAAGACGAGGCTGACGGGAAGCGGATGTCTTTGATCGGAT
TTAAGCTCTTCATCGGTAACTTGTCCAAGGAAACGCACGACACTGGGCTC
GAGAAATATTTCAAGGACGCGATAGGCGGAGAAATAGTCTGGGCACAGAT
GGCGGGGGTCGAGGGGCGGAGGACGAGAACGTCCGGCTCTTTGTGGGCGG
TCTCCCCGACAACTGTGTCGAGGAGGATCTGATGGAGTGAGCTATTGAGG
AGCTGCACGAGACCGAACTCGACGGGTCCAAGATAACGGTGGATCGTAGC
ACGCAAGGCATGATTGAAAAAGGTTTGCAAGGACCGAAACACAGGCGAAA
GTAAACGGTATGGCTTCATCACCTTTAAAGACGAGGCTGACGGGAAGCGG
ATGTCTTTGATCGGATTTAAGCTCTTCATCGGTAACTTGTCCAAGGAAAC
GCACGACACTGGGCTCGAGAAATATTTCAAGGACGCGATAGGCGGAGAAA
TAGTCTGGGCACAG
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Synonyms
Publications