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Properties
| Property Name | Value |
|---|
| Product | Nucleotide-binding, alpha-beta plait |
| Orig transcript id | gnl|cribi|Naga_100245g2.7079.mrna |
| Orig protein id | gnl|cribi|Naga_100245g2.7079 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:462690..464078 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7644 ID=rna7644|Name=rna7644|organism=Nannochloropsis gaditana|type=mRNA|length=1905bp
GATACAAGGAGCAAGTAGAGTTGAATGAGCTATCACACGTAGCGTTTCCC
TCCCACCCTCAGAGACGGGTGACTCGATTGCAGGGATACGATGCTGACAG
ACCGAGAAACGTATGCTTTGTCGAAACTTTCATGCCCTGAAACACACAAA
CTCATCTCCCTACCTCACTCACTTTTCTAGCTCGTCGTTTGCATGGACCC
TATTGGCAATGCCAGGAGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGT
CTCAATGTTGACCAACAAGATTGGATTGACGAAGCGTTACAAGCTTTTCA
TCAAGATGTCGAGGATTTCTGGGTCCCAAAGGCAGTGTGTCGATTGACAC
AGCCAATAAGTGCCTTGACTTTCCTTAGGGACTTTGTCCAGCCCTCCATC
CCGGTCGTGTTTTGTCAAGGAAGCGGCCTAATGGGAGAAGATTGGGGGCT
GGAGGCTTGGAAAGATTGGAAAGAAATTGTTGAAAAGATCGGAGGAGAGC
GATTGGTCTCCGTGAACGTGACGCCTGATGGGAGGGGGGACGCAATCTTG
GGTTTAAGGGAAGGGCAGTCTGGGAGAGGAAGCGGGAGAGGAGAAGTAGA
CGATCAGGACGGATCGAGAAATGCATCGGGGGATGCACAAGCGAGCTCCG
ACAAATCTGACTCCTTGTCATCGCCGAGAAATTATCCTACTTCGCGCCCA
CGACGGGTCTTTGTGAAGCCAGAAGAAAGGCGGATGACGTTTGCGTCCTT
TGTCAAGACACTGCTGCAGGCCAGCGGGGGAGAGGAACAAGAAAAGGAGG
TCATGTATTTGAGTCAACAGGATGACAATCTGCGTCGGGAATTTCCGGAG
TTGCTTGGGAAAGAGCAGCTGCCGGACAGAGGAGGAGGGGGGCAGGTATC
CTACCTTTTTTCTCCTTGCTTTCTCTCCCCCCCCCTCTTTCTTCGATTTC
TTCTCACATTTTTATTGAACGAACGTCTCATTCGTCTAGATTTCTTTCAA
ATATTGTTCCCCCTTTTTTCCTTTTTCGTTCTTTTAGGTACCTGCCAACG
GCTTTCCCCTCGCCCAGCAAGCTTTCGGCTCTCCTCCCGATGCCATCAAC
CTCTGGATTGGGGATGCTCGCTCCATTTCGTCCCTCCACAAGGACCCTTA
CGAAAATATGTATGCCGTGCTAAAGGGAGAAAAGGTAGGAAGGATTCCTC
TGCCCATCGCAACCTCCTCTGGAGCATTCTCCGTTCTTTGACTGCAAAGG
CCGCTATCGTCATTAAAAAATGCCAGCCAGCGTGTGGTCAGTCACACATT
CTGATTCGTTCATTACCGCAACCCGTTCTCACCCCCTCCCCACTTCAGCA
TTTTACTCTCTTCCCGCCCTCGGACGTGTCCTCCTTCCTCTTCGCTCGCG
GTCTTCCGCAAGCCTCCTATGCCTTCGATTCGATCCGCTCCTGTTTTCAA
GTCAACCTCGATGGCAGAGAGAAGGGCTGTACGAACGATGGGACGGTTGA
TTGGGTCGATTTGGAAGCTTCGAAGGCAGCGGCAGCAAGGCGGGGAGGAA
GGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAGAGGCGGGAGCGTGTCCTG
CATCCGCTAGAAGTGCGAGTGAAGGAAGGAGAAGTCTTGTATCTACCCGC
TTTGTGGTACCACGAAGTAACTCAGACGTGTCCCACCGTTGCCGTAAACT
TCTGGCACGACATGTGTTTCTTTGGCCCCAAGTATGTGTACTTCAACTTC
TTGCAACGGCTAGGTGCGCAGCGACAAGAGCGGATGAAAGAGAGGGGGAG
GGACGGGCGAGCAGAAAGGGGCCAGGAAATCGACAGGCGCGATCTCAACG
CTTGTAGAAGTTACGGAAGTACGAGTCAAACGTGAAAAGAAAACATTCTG
GGAAG back to topprotein sequence of rna7644 >rna7644-protein ID=rna7644-protein|Name=rna7644|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MEGGKEVRLFVGGLPEGCTDKDLMHKFRRSDPVEAFLPPRQSVAPLYGFV
VVRDEGRNLKEAFALEGDYFDDRSPHRMAVTFSKPRGGGGGGGGGGGDRY
AGSSGGYSRGRSPSPVYSRRRGRSPSPSDREALSSRSVAFPLSLPLSVSG
PTTLAVLRRKEAGREVCMGPRCWKGVKKEKEVRAKLAGRGQEGDRFAFSA
LQGPCKA back to topmRNA from alignment at CM002472.1:462690..464078- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7644 ID=rna7644|Name=rna7644|organism=Nannochloropsis gaditana|type=mRNA|length=1389bp|location=Sequence derived from alignment at CM002472.1:462690..464078- (Nannochloropsis gaditana)
ATGGAGGGAGGGAAGGAGGTCCGCCTCTTTGTGGGGGGCCTCCCCGAGGG
ATGCACTGACAAGGATTTAATGCACAAATTTCGCAGGTTGGGAGGATGGT
GGAGGGGAGGGAGGATGGAGGGAAGGGAGGGCGGAGAGAGGGCAAGCGGC
TCGGGGCCAACGTGGGGAGACTGCCGCCAGAGTCTCGAAGGAGGCGTCTA
CTGCATGACTGGGTGGTAGAGGAGAGGGTAGGCAGACCTGACCCTCGCAG
GTCCTTTCAGCGTGTTGATTGCTCCAAGGCCCACCCTCCCTCCCTCCCTC
GAACCCCTCCCTCCCCTTCCCTCCGTCTCGCCTCAGGTCAGATCCCGTGG
AGGCCTTCCTGCCCCCGCGCCAGTCCGTGGCGCCTCTCTACGGCTTTGTG
GTCGTGCGAGACGAGGGAAGGAATTTGAAGGAGGCGTTTGCCCTGGAGGG
GTAAGGGGAAGGGGAGAGAGGGGGAGAGAGTGGGGTGGGGAAGAGTGAAC
AGAGAAAGAGAACGGCGCTTGGTCGAGAAGAAGAGTCCGAGAATCTGCTC
ACCTGATTATCTTTACTTACATCTTCCCTTCCCTCCTTCTCTCCCTCTCT
TCCCTCCCTTCTTCCCTCCATATGCTCCAGAGACTACTTCGACGATCGCA
GCCCGCACCGGATGGCCGTTACATTCTCCAAGCCACGAGGAGGGGGAGGG
GGAGGGGGAGGAGGGGGAGGAGATCGATACGGTGAGTCGGGCGGAAAATG
GGGTTGGAGGGGGGCAAGATCACGGTGTCGGCCTTGACAAGGGCCACAGG
GCAACCTTCTGCTCCTGCCTGGGACTAATCCTCCCTCTCTCCCTCTTTCC
CTCCTTCCCTGCCCCCCTCCCTCCCTCCCTTGCTCCCGTAGCCGGGAGTT
CTGGGGGGTATAGCCGGGGCCGAAGTCCGTCTCCCGTGTACTCGCGTCGG
CGAGGCCGGTCTCCCTCGCCCTCCGACCGTGAGTGGCGGGAATGGCGTGG
GACAAATGAGGGGAGGAAGAGAAAGGGGAAGAAGGGAGCTATGCAAGTCT
TGAATCGTGTAGATCTTGGCTATTGGAATTCTTCCCTTCCCTTTCCTTTC
GACGTAGCAAAATACTTACCAGGTATTGATTGTATCTTACATCTTTCATC
TGGTCAGGGCACTATCGTCGCGGTCGGTCGCGTTCCCGCTCTCCCTACCG
CTCTCGGTCTCGGGGCCGACGACGCTCGCCGTACTAAGAAGAAAGGAGGC
GGGAAGGGAGGTTTGCATGGGCCCTAGATGTTGGAAGGGTGTGAAGAAGG
AGAAAGAGGTGAGGGCAAAGCTCGCGGGAAGAGGGCAAGAAGGAGACCGG
TTCGCTTTCTCAGCCCTGCAGGGCCCGTGCAAGGCGTGA back to topCoding sequence (CDS) from alignment at CM002472.1:462690..464078- >rna7644 ID=rna7644|Name=rna7644|organism=Nannochloropsis gaditana|type=CDS|length=3120bp|location=Sequence derived from alignment at CM002472.1:462690..464078- (Nannochloropsis gaditana)
GGCACTATCGTCGCGGTCGGTCGCGTTCCCGCTCTCCCTACCGCTCTCGG
TCTCGGGGCCGACGACGCTCGCCGTACTAAGAAGAAAGGAGGCGGGAAGG
GAGGTTTGCATGGGCCCTAGATGTTGGAAGGGTGTGAAGAAGGAGAAAGA
GGTGAGGGCAAAGCTCGCGGGAAGAGGGCAAGAAGGAGACCGGTTCGCTT
TCTCAGCCCTGCAGGGCCCGTGCAAGGCGTGACCGGGAGTTCTGGGGGGT
ATAGCCGGGGCCGAAGTCCGTCTCCCGTGTACTCGCGTCGGCGAGGCCGG
TCTCCCTCGCCCTCCGACCGTGAAGACTACTTCGACGATCGCAGCCCGCA
CCGGATGGCCGTTACATTCTCCAAGCCACGAGGAGGGGGAGGGGGAGGGG
GAGGAGGGGGAGGAGATCGATACGGTCAGATCCCGTGGAGGCCTTCCTGC
CCCCGCGCCAGTCCGTGGCGCCTCTCTACGGCTTTGTGGTCGTGCGAGAC
GAGGGAAGGAATTTGAAGGAGGCGTTTGCCCTGGAGGGATGGAGGGAGGG
AAGGAGGTCCGCCTCTTTGTGGGGGGCCTCCCCGAGGGATGCACTGACAA
GGATTTAATGCACAAATTTCGCAGGGCACTATCGTCGCGGTCGGTCGCGT
TCCCGCTCTCCCTACCGCTCTCGGTCTCGGGGCCGACGACGCTCGCCGTA
CTAAGAAGAAAGGAGGCGGGAAGGGAGGTTTGCATGGGCCCTAGATGTTG
GAAGGGTGTGAAGAAGGAGAAAGAGGTGAGGGCAAAGCTCGCGGGAAGAG
GGCAAGAAGGAGACCGGTTCGCTTTCTCAGCCCTGCAGGGCCCGTGCAAG
GCGTGACCGGGAGTTCTGGGGGGTATAGCCGGGGCCGAAGTCCGTCTCCC
GTGTACTCGCGTCGGCGAGGCCGGTCTCCCTCGCCCTCCGACCGTGAAGA
CTACTTCGACGATCGCAGCCCGCACCGGATGGCCGTTACATTCTCCAAGC
CACGAGGAGGGGGAGGGGGAGGGGGAGGAGGGGGAGGAGATCGATACGGT
CAGATCCCGTGGAGGCCTTCCTGCCCCCGCGCCAGTCCGTGGCGCCTCTC
TACGGCTTTGTGGTCGTGCGAGACGAGGGAAGGAATTTGAAGGAGGCGTT
TGCCCTGGAGGGATGGAGGGAGGGAAGGAGGTCCGCCTCTTTGTGGGGGG
CCTCCCCGAGGGATGCACTGACAAGGATTTAATGCACAAATTTCGCAGGG
CACTATCGTCGCGGTCGGTCGCGTTCCCGCTCTCCCTACCGCTCTCGGTC
TCGGGGCCGACGACGCTCGCCGTACTAAGAAGAAAGGAGGCGGGAAGGGA
GGTTTGCATGGGCCCTAGATGTTGGAAGGGTGTGAAGAAGGAGAAAGAGG
TGAGGGCAAAGCTCGCGGGAAGAGGGCAAGAAGGAGACCGGTTCGCTTTC
TCAGCCCTGCAGGGCCCGTGCAAGGCGTGACCGGGAGTTCTGGGGGGTAT
AGCCGGGGCCGAAGTCCGTCTCCCGTGTACTCGCGTCGGCGAGGCCGGTC
TCCCTCGCCCTCCGACCGTGAAGACTACTTCGACGATCGCAGCCCGCACC
GGATGGCCGTTACATTCTCCAAGCCACGAGGAGGGGGAGGGGGAGGGGGA
GGAGGGGGAGGAGATCGATACGGTCAGATCCCGTGGAGGCCTTCCTGCCC
CCGCGCCAGTCCGTGGCGCCTCTCTACGGCTTTGTGGTCGTGCGAGACGA
GGGAAGGAATTTGAAGGAGGCGTTTGCCCTGGAGGGATGGAGGGAGGGAA
GGAGGTCCGCCTCTTTGTGGGGGGCCTCCCCGAGGGATGCACTGACAAGG
ATTTAATGCACAAATTTCGCAGGGCACTATCGTCGCGGTCGGTCGCGTTC
CCGCTCTCCCTACCGCTCTCGGTCTCGGGGCCGACGACGCTCGCCGTACT
AAGAAGAAAGGAGGCGGGAAGGGAGGTTTGCATGGGCCCTAGATGTTGGA
AGGGTGTGAAGAAGGAGAAAGAGGTGAGGGCAAAGCTCGCGGGAAGAGGG
CAAGAAGGAGACCGGTTCGCTTTCTCAGCCCTGCAGGGCCCGTGCAAGGC
GTGACCGGGAGTTCTGGGGGGTATAGCCGGGGCCGAAGTCCGTCTCCCGT
GTACTCGCGTCGGCGAGGCCGGTCTCCCTCGCCCTCCGACCGTGAAGACT
ACTTCGACGATCGCAGCCCGCACCGGATGGCCGTTACATTCTCCAAGCCA
CGAGGAGGGGGAGGGGGAGGGGGAGGAGGGGGAGGAGATCGATACGGTCA
GATCCCGTGGAGGCCTTCCTGCCCCCGCGCCAGTCCGTGGCGCCTCTCTA
CGGCTTTGTGGTCGTGCGAGACGAGGGAAGGAATTTGAAGGAGGCGTTTG
CCCTGGAGGGATGGAGGGAGGGAAGGAGGTCCGCCTCTTTGTGGGGGGCC
TCCCCGAGGGATGCACTGACAAGGATTTAATGCACAAATTTCGCAGGGCA
CTATCGTCGCGGTCGGTCGCGTTCCCGCTCTCCCTACCGCTCTCGGTCTC
GGGGCCGACGACGCTCGCCGTACTAAGAAGAAAGGAGGCGGGAAGGGAGG
TTTGCATGGGCCCTAGATGTTGGAAGGGTGTGAAGAAGGAGAAAGAGGTG
AGGGCAAAGCTCGCGGGAAGAGGGCAAGAAGGAGACCGGTTCGCTTTCTC
AGCCCTGCAGGGCCCGTGCAAGGCGTGACCGGGAGTTCTGGGGGGTATAG
CCGGGGCCGAAGTCCGTCTCCCGTGTACTCGCGTCGGCGAGGCCGGTCTC
CCTCGCCCTCCGACCGTGAAGACTACTTCGACGATCGCAGCCCGCACCGG
ATGGCCGTTACATTCTCCAAGCCACGAGGAGGGGGAGGGGGAGGGGGAGG
AGGGGGAGGAGATCGATACGGTCAGATCCCGTGGAGGCCTTCCTGCCCCC
GCGCCAGTCCGTGGCGCCTCTCTACGGCTTTGTGGTCGTGCGAGACGAGG
GAAGGAATTTGAAGGAGGCGTTTGCCCTGGAGGGATGGAGGGAGGGAAGG
AGGTCCGCCTCTTTGTGGGGGGCCTCCCCGAGGGATGCACTGACAAGGAT
TTAATGCACAAATTTCGCAG back to top
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