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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101680g1.4017.mrna |
| Orig protein id | gnl|cribi|Naga_101680g1.4017 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:439962..441931 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7639 ID=rna7639|Name=rna7639|organism=Nannochloropsis gaditana|type=mRNA|length=866bp
GGTGGCGAGCTTTGTAGGTTAAAGGCCTTGATCTTCGCCCGCGGGAGGGT
TCATTTGGATAAATTGAACGGGACGAGAAAGATGATAATGGAGAGCGTTC
GTGCTCCCACCGCCATTATTCTCGTTTCCCACACACGGTGCAGGACCTTA
CGACTCACGACGACACTCTTCCACAGACAGTATTGCCAGGGGCATGTTGT
TCTTGACGAAACTTCTGCGAGCGGGTGCTTTTGCGGTTTCTGTTCTCGCG
TACTCTTATTTAGAGCTGATCGATCTCTCCGGACTTGCACCGGGAAACGG
GATAGAGAGCGGGCATGGGACTGAAAATGGAAAAGGAGGGGACTTCTTGA
CGGCCAGCATGGGAGCCGCAGGGATAACGTTGCCACCAGCCAGTGTCATG
AGCATGTATTTGACATATCTTCCGATCTTCGTCGTCCCGCTGCTCTTTCT
TGGACTCTGTGTCGGTGGGAGTTTCCAGGGCATGAACGCGGTCTTGCATC
ACACCCTCCTCGTCCTGGCCGCAGTGCGTCCATCTCCTTCCCTACCCCTC
TTCCTCCTCTTCCTCGCCTCCGCGGCGGGCTACTGGGCGAGCGGAGGGGT
GGCCTCCGAGCAGAGCGACAAGGTGGCATTCCGTCCCTATGAATCTGAGA
TTCGTCAGCTCCTCCTCCGGCACGACCCCGCCCAGCTTCATCGGGTCGAC
TCCCTCTTGGAGGGGTATCAGTGGCGGGGGGGAGGGAAGCGACTGTTACA
GGTACCCCCCCTCCCTCCTTTCTTCCTCCTTCCCTCCCTCCCTCCCCCCC
CTTCCCATCTCGTCTGCGCCCCCCCCCAACCTGTATTTTTCCCCCCGTCC
GCGTTGGCCTCCATAG back to topprotein sequence of rna7639 >rna7639-protein ID=rna7639-protein|Name=rna7639|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
FSSFFLPRWQELRDRYTTKTLDTKTSEEYRPPSRPPSPSSLPSSSSASFS
SLPDASTYTSDPKPSSFPPSFPSPEIHAPHVPRWTLETRTGGDRIEQGAS
RADLFHHRHHRHPALAQEPMSFSPPVAPHAHGLQWQRYMHEERVAVGKGG
VYGDSFDARMESFEERRRGNGGHGGGEGGREEGREGGREGGRSLSTSVMH
ASQAYHQSIIDRQDQRRREVFEPRQPHSLYR back to topmRNA from alignment at CM002472.1:439962..441931+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7639 ID=rna7639|Name=rna7639|organism=Nannochloropsis gaditana|type=mRNA|length=1970bp|location=Sequence derived from alignment at CM002472.1:439962..441931+ (Nannochloropsis gaditana)
ttttcctccttcttccttcctcgctggCAGGAGCTCCGTGATCGCTACAC
TACCAAGACTCTCGACACCAAGACAAGCGAAGAAtaccgccctccttcgc
gcccgccttccccctcctccctcccttcctcctcctctgcctccttctcg
tcgtTGCCCGACGCCTCCACCTATACCTCCGACccaaagccttcctcctt
ccctccctccttcccttccccggaAATCCATGCCCCCCATGTGCCAAGAT
GGACCTTGGAGACtcggtaaggagggagggagggagggagggaggaaggg
aggtaagaagagagaaaggaaaaagtcTGACATGATTGCGCGCCggtcct
tttctttctcgaGCCGTGCCAAGGCAAGGGTCATGAACGAAGCGAAAGGA
TCGGAACAGGCGAGGAACAAACTCAGGGGCAGGCACTCCATGCTGACGCT
CaacttcttccccctccctactCGCCAACAATGCACCTacccactctccc
tccttccctccctccctccctccctccctccctgcctgcctttccctgcc
ACCTTCTCtgcaggacgggaggagatCGGATCGAGCAGGGAGCGTCGAGG
GCGgaccttttccatcaccgTCATCACCGGCACCCCGCGCTCGCCCAGGA
GCCAATGTCCTTCTCACCACCCGTtgccccccacgcccacggACTGCAAT
GGCAGCGCTACATGCAtgaggagagggtggcggTGGGCAAGGGTGGAGTC
tatggtagggagggagggagggagggagggaggggggccgggggctcGGC
AGGGGACGTCAAGACACTTCCTATCTTTTGATTTCTTCCTGACCTCTTCC
CTTTTGTCCTCGCCAatttttgccttcctccccctttttatGGCGTAGGC
GACAGTTTCGACGCGAGGATGGAGAGTTTCgaggagcgaaggaggggaaa
tggagggcacggaggcggggaaggagggagagaggaagggagggagggag
ggagggagggagggaggagcttgAGTACCTCGGTCATGCACGCCTCTCAG
GCCTACCACGTAAGTCTCTCCTTTCGGCCTCCTTCGACTTCCTTGGGAGC
GATCGTGTGCCTATCAGCaggcccttctccctccttccctctcccctctt
tcttcttttttcctttctctccaagTGCTCAGGTCCCTTCGTCTCCGGCA
tcttttcccaccctttctgTCCCCTCCCTATACACACCTCATCCTGTACC
CGacacggcctccctcttcctgtccctcGCCCTAatggccatctccctcc
ttcccttcctcccttccccctccctaccaGCAAAGTATCATCGACCGACA
AGATCAGCGACGGCGGGAGGTGTTCGAGCCCCGGCAACCCCATTCGCTGT
ACAGATAACCGAAGGGGCTGCGGAAAGCAAGATCAGGTGGGCTTCGCTGA
GAATTCGGCAGCGTCTGACGAGCCGcacgaggtggtggagggatgAGTAC
CGGCGGGGATTGAGGCGGTCAAAGACTAggcaggatgggagggagggagg
gagggagggagggaaggagggaggtaccTGGCGGTGGACAGCTTGGACGT
GGGGGGGTTGAGAGGGAGTGTCAGGGACTCTCTccaggagggtgggatga
aggagcgggggaagagaaggcgtCAAGCACGTTGTTGACGCGTGTGTCAT
CAAGGCTTTTGTGCATAGGAGGGCACGCGTAAGATGAAGCTACGGCAGGC
AGAGGACCGGCcccagggagaaggaggggtggagggagtggtAGCTGCTG
CAAAGCCTTCCCCGCCAGATGAAGGAGGCTGGGAAGAGATGGacaggagg
gatgggagacgagggagctGAGCCGTTGTGAGGTATCTAGAGCGTTCTGC
GTTACGTCAGCGCAGCCACGCGCCTATTGTCCCCTACCATGCGCGCTGCT
TATGACCATCGTCAACAATC back to topCoding sequence (CDS) from alignment at CM002472.1:439962..441931+ >rna7639 ID=rna7639|Name=rna7639|organism=Nannochloropsis gaditana|type=CDS|length=2784bp|location=Sequence derived from alignment at CM002472.1:439962..441931+ (Nannochloropsis gaditana)
ttttcctccttcttccttcctcgctggCAGGAGCTCCGTGATCGCTACAC
TACCAAGACTCTCGACACCAAGACAAGCGAAGAAtaccgccctccttcgc
gcccgccttccccctcctccctcccttcctcctcctctgcctccttctcg
tcgtTGCCCGACGCCTCCACCTATACCTCCGACccaaagccttcctcctt
ccctccctccttcccttccccggaAATCCATGCCCCCCATGTGCCAAGAT
GGACCTTGGAGACtcggacgggaggagatCGGATCGAGCAGGGAGCGTCG
AGGGCGgaccttttccatcaccgTCATCACCGGCACCCCGCGCTCGCCCA
GGAGCCAATGTCCTTCTCACCACCCGTtgccccccacgcccacggACTGC
AATGGCAGCGCTACATGCAtgaggagagggtggcggTGGGCAAGGGTGGA
GTCtatgGCGACAGTTTCGACGCGAGGATGGAGAGTTTCgaggagcgaag
gaggggaaatggagggcacggaggcggggaaggagggagagaggaaggga
gggagggagggagggagggagggaggagcttgAGTACCTCGGTCATGCAC
GCCTCTCAGGCCTACCACCAAAGTATCATCGACCGACAAGATCAGCGACG
GCGGGAGGTGTTCGAGCCCCGGCAACCCCATTCGCTGTACAGATAAtttt
cctccttcttccttcctcgctggCAGGAGCTCCGTGATCGCTACACTACC
AAGACTCTCGACACCAAGACAAGCGAAGAAtaccgccctccttcgcgccc
gccttccccctcctccctcccttcctcctcctctgcctccttctcgtcgt
TGCCCGACGCCTCCACCTATACCTCCGACccaaagccttcctccttccct
ccctccttcccttccccggaAATCCATGCCCCCCATGTGCCAAGATGGAC
CTTGGAGACtcggacgggaggagatCGGATCGAGCAGGGAGCGTCGAGGG
CGgaccttttccatcaccgTCATCACCGGCACCCCGCGCTCGCCCAGGAG
CCAATGTCCTTCTCACCACCCGTtgccccccacgcccacggACTGCAATG
GCAGCGCTACATGCAtgaggagagggtggcggTGGGCAAGGGTGGAGTCt
atgGCGACAGTTTCGACGCGAGGATGGAGAGTTTCgaggagcgaaggagg
ggaaatggagggcacggaggcggggaaggagggagagaggaagggaggga
gggagggagggagggagggaggagcttgAGTACCTCGGTCATGCACGCCT
CTCAGGCCTACCACCAAAGTATCATCGACCGACAAGATCAGCGACGGCGG
GAGGTGTTCGAGCCCCGGCAACCCCATTCGCTGTACAGATAAttttcctc
cttcttccttcctcgctggCAGGAGCTCCGTGATCGCTACACTACCAAGA
CTCTCGACACCAAGACAAGCGAAGAAtaccgccctccttcgcgcccgcct
tccccctcctccctcccttcctcctcctctgcctccttctcgtcgtTGCC
CGACGCCTCCACCTATACCTCCGACccaaagccttcctccttccctccct
ccttcccttccccggaAATCCATGCCCCCCATGTGCCAAGATGGACCTTG
GAGACtcggacgggaggagatCGGATCGAGCAGGGAGCGTCGAGGGCGga
ccttttccatcaccgTCATCACCGGCACCCCGCGCTCGCCCAGGAGCCAA
TGTCCTTCTCACCACCCGTtgccccccacgcccacggACTGCAATGGCAG
CGCTACATGCAtgaggagagggtggcggTGGGCAAGGGTGGAGTCtatgG
CGACAGTTTCGACGCGAGGATGGAGAGTTTCgaggagcgaaggaggggaa
atggagggcacggaggcggggaaggagggagagaggaagggagggaggga
gggagggagggagggaggagcttgAGTACCTCGGTCATGCACGCCTCTCA
GGCCTACCACCAAAGTATCATCGACCGACAAGATCAGCGACGGCGGGAGG
TGTTCGAGCCCCGGCAACCCCATTCGCTGTACAGATAAttttcctccttc
ttccttcctcgctggCAGGAGCTCCGTGATCGCTACACTACCAAGACTCT
CGACACCAAGACAAGCGAAGAAtaccgccctccttcgcgcccgccttccc
cctcctccctcccttcctcctcctctgcctccttctcgtcgtTGCCCGAC
GCCTCCACCTATACCTCCGACccaaagccttcctccttccctccctcctt
cccttccccggaAATCCATGCCCCCCATGTGCCAAGATGGACCTTGGAGA
CtcggacgggaggagatCGGATCGAGCAGGGAGCGTCGAGGGCGgacctt
ttccatcaccgTCATCACCGGCACCCCGCGCTCGCCCAGGAGCCAATGTC
CTTCTCACCACCCGTtgccccccacgcccacggACTGCAATGGCAGCGCT
ACATGCAtgaggagagggtggcggTGGGCAAGGGTGGAGTCtatgGCGAC
AGTTTCGACGCGAGGATGGAGAGTTTCgaggagcgaaggaggggaaatgg
agggcacggaggcggggaaggagggagagaggaagggagggagggaggga
gggagggagggaggagcttgAGTACCTCGGTCATGCACGCCTCTCAGGCC
TACCACCAAAGTATCATCGACCGACAAGATCAGCGACGGCGGGAGGTGTT
CGAGCCCCGGCAACCCCATTCGCTGTACAGATAA back to top
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