EWM23054.1, cds7619 (CDS) Nannochloropsis gaditana

Overview
NameEWM23054.1
Unique Namecds7619
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:439962..440227 +
Alignment locationCM002472.1:440525..440715 +
Alignment locationCM002472.1:440860..441020 +
Alignment locationCM002472.1:441292..441369 +

Link to JBrowse

Properties
Property NameValue
Start range439962
Start range.
Protein idEWM23054.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101680g1.4017.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:439962..440227 +
CM002472.1supercontigCM002472.1:440525..440715 +
CM002472.1supercontigCM002472.1:440860..441020 +
CM002472.1supercontigCM002472.1:441292..441369 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23054.1 vs. NCBI_GenBank
Match: gi|585103865|gb|EWM23054.1| (hypothetical protein Naga_101680g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 462.996 bits (1190), Expect = 9.553e-165
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 FSSFFLPRWQELRDRYTTKTLDTKTSEEYRPPSRPPSPSSLPSSSSASFSSLPDASTYTSDPKPSSFPPSFPSPEIHAPHVPRWTLETRTGGDRIEQGASRADLFHHRHHRHPALAQEPMSFSPPVAPHAHGLQWQRYMHEERVAVGKGGVYGDSFDARMESFEERRRGNGGHGGGEGGREEGREGGREGGRSLSTSVMHASQAYHQSIIDRQDQRRREVFEPRQPHSLYR 231
            FSSFFLPRWQELRDRYTTKTLDTKTSEEYRPPSRPPSPSSLPSSSSASFSSLPDASTYTSDPKPSSFPPSFPSPEIHAPHVPRWTLETRTGGDRIEQGASRADLFHHRHHRHPALAQEPMSFSPPVAPHAHGLQWQRYMHEERVAVGKGGVYGDSFDARMESFEERRRGNGGHGGGEGGREEGREGGREGGRSLSTSVMHASQAYHQSIIDRQDQRRREVFEPRQPHSLYR
Sbjct:    1 FSSFFLPRWQELRDRYTTKTLDTKTSEEYRPPSRPPSPSSLPSSSSASFSSLPDASTYTSDPKPSSFPPSFPSPEIHAPHVPRWTLETRTGGDRIEQGASRADLFHHRHHRHPALAQEPMSFSPPVAPHAHGLQWQRYMHEERVAVGKGGVYGDSFDARMESFEERRRGNGGHGGGEGGREEGREGGREGGRSLSTSVMHASQAYHQSIIDRQDQRRREVFEPRQPHSLYR 231
The following BLAST results are available for this feature:
BLAST of EWM23054.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103865|gb|EWM23054.1|9.553e-165100.00hypothetical protein Naga_101680g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7639rna7639Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications