|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101297g1.4248.mrna |
| Orig protein id | gnl|cribi|Naga_101297g1.4248 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:425382..426322 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7630 ID=rna7630|Name=rna7630|organism=Nannochloropsis gaditana|type=mRNA|length=1018bp
TTTCTATTTTTTGCAACCTCTCCGGCCATTCCAGAAGGGAAAGGGACAAA
AACCTGAAGATCTGACGACGATCGCGTGCGAAGTCTCGTACAAGAGTGCC
AGGCGTTGGAATTTGCGGCAGTCCTTGTGTGGTTTTTTCCTCAAAAGAGA
CTTGGCCATTTTCAAAGGAACCGTTAGGATCAAAAGCAACCTCGTACGGC
AATGCCACGGTCGATAAATTCACCTGAACTTCGGGATGAAGGCCCCAAGG
CGCCTTTAAACGTGTTGACACGCGACTCATGCAGACTTTTACAGACATTT
TGCAGGTGTGGGCTTGAAACGAGGGCGTAAGGATTGAACTTACGGTGCAC
GTCCCAGCGGCCCAAGCAAACGTCATACGGTGTCGCCCAGAGACCTCTCT
CTACCTTCGATGCCCGCGTCCACTTCCCCTCCCCCGTTCCCAACCGATGT
CACGAACCTTTCCCCCCGAAAATTTTCTCTTTCGATGCTGTTCAAGACCA
GGCGTCGCTGGAGTGCCACAGCCGACTCTGTGGAGGTGTGGGAAGATGCT
CGTGCTTCGTTGGGGGGTACCGATGAAGGGCAACTACGCGAGGAAAGCAG
AGAGGAGGAGCGCAGGCAAGGACGAGAGATGATTAAGGCTTCGTCCTCTG
ATCTCGATCCCTGCGTTGCTCCTTTCCCTCCTTGCTCCTCGCTTGTCCCC
AGGCAGGCATCGCCGGGGAGGGGGCTGGCGACGGAGGAGGAGGAGGAGGA
GGGGGAGGAGGAGGGGGAGGAGGAGGGGGAGGAGGAAGGGAAGGAAAGAA
AGGCATTCAATAGGGGGAAAAAAAGAAGACGAAAGAGGGCACCAAGCATG
GGAAGGGATGAAGAGGAGGAGGGGACCAAAATTGATGGGATGGGAGGGGA
ACTTTGCCCTTCAGAGAGGATCCTCCTCGCTCCCGAAGCACCCTTCCCTC
CTTCCTCTTCCGGCTTGGGCCCAGGAACTGAGGAAGAAGGGAAGGGGGGG
AGGGGGCGATGGAGATGA back to topprotein sequence of rna7630 >rna7630-protein ID=rna7630-protein|Name=rna7630|organism=Nannochloropsis gaditana|type=polypeptide|length=93bp
MKKRIGFDDTLLVLVVGPHEAGESVTRACERGIRSKTAQKIRNGVRKNFS
MHIGILHRPRLWCREATLNEIIKQTFCGVRDMTCFLVVCSFIL back to topmRNA from alignment at CM002472.1:425382..426322+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7630 ID=rna7630|Name=rna7630|organism=Nannochloropsis gaditana|type=mRNA|length=941bp|location=Sequence derived from alignment at CM002472.1:425382..426322+ (Nannochloropsis gaditana)
ctccctccctcttcttctcttccggGGCCTTGTGCCCGTGTTGACGACGA
GCACTTGACCCGcttctcgctttcctcgatccctccctcctacttcccct
ctttttccctccccccttctcctccctccttcccttccaattacgtcctc
ttcccctccttcatccagCTGGCCGTCGCCCCCTACATCAtgagggaggt
gaagccTTTAATGCAAGGAGCAGACCTGATCTccacggacgaggaggagg
actgaGAGacgccgagagggagggagggagggagggagggaaggcgagta
GGAAGGGACGAACGAGAAGGGAGACCATGAGGGGGAACAGATCGATCTCg
tgaggtgaggagggcgctGTTTTAATCTCTTCAATGTATGACACAAGGGG
GAAGATTCGGGTGATTGCGGGTTACAGAAGGACCGGATAAGGAAGGTTGA
ATTGAAATTCCTGTGTAAAATGGTAGACATAAGGTCAAGTGCGAAAAGGA
ATCGATGTTGCTCGAGGCAGTGGGGGAAGATCGATGGgcgcgaggaaaga
ggatgataagggaggagaagggtgagggaggaggaaggaaggaagacgtt
GGGTGTTTGCGTGCGAGAGGAAGCGCGTAAGGCCTGAGGACACGCTCAAA
GAATTGTGGATGAAAAAGAGAATTGGATTTGACGACACGCTCCTTGTTCT
TGTGGTGGGACCGCATGAGGCTGGGGAAAGTGTCACACGCGCATGCGAGA
GAGGGATAAGAAGCAAAACGGCGCAAAAAATAAGAAATGGAGTGCGAAAG
AACTTCTCGATGCATATAGGAATCCTTCACCGTCCCCGACTCTGGTGTCG
AGAAGCAACCTTAAATGAGATTATTAAGCAAACATTTTGTGGAGTCCGGG
ACATGACTTGCTTTTTGGTTGTTTGTTCCTTCATCTTGTAG back to topCoding sequence (CDS) from alignment at CM002472.1:425382..426322+ >rna7630 ID=rna7630|Name=rna7630|organism=Nannochloropsis gaditana|type=CDS|length=282bp|location=Sequence derived from alignment at CM002472.1:425382..426322+ (Nannochloropsis gaditana)
ATGAAAAAGAGAATTGGATTTGACGACACGCTCCTTGTTCTTGTGGTGGG
ACCGCATGAGGCTGGGGAAAGTGTCACACGCGCATGCGAGAGAGGGATAA
GAAGCAAAACGGCGCAAAAAATAAGAAATGGAGTGCGAAAGAACTTCTCG
ATGCATATAGGAATCCTTCACCGTCCCCGACTCTGGTGTCGAGAAGCAAC
CTTAAATGAGATTATTAAGCAAACATTTTGTGGAGTCCGGGACATGACTT
GCTTTTTGGTTGTTTGTTCCTTCATCTTGTAG back to top
|