EWM23063.1, cds7610 (CDS) Nannochloropsis gaditana

Overview
NameEWM23063.1
Unique Namecds7610
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:426041..426322 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23063.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101297g1.4248.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:426041..426322 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23063.1 vs. NCBI_GenBank
Match: gi|585103881|gb|EWM23063.1| (hypothetical protein Naga_101297g1 [Nannochloropsis gaditana])

HSP 1 Score: 192.2 bits (487), Expect = 3.894e-62
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 
Query:    1 MKKRIGFDDTLLVLVVGPHEAGESVTRACERGIRSKTAQKIRNGVRKNFSMHIGILHRPRLWCREATLNEIIKQTFCGVRDMTCFLVVCSFIL 93
            MKKRIGFDDTLLVLVVGPHEAGESVTRACERGIRSKTAQKIRNGVRKNFSMHIGILHRPRLWCREATLNEIIKQTFCGVRDMTCFLVVCSFIL
Sbjct:    1 MKKRIGFDDTLLVLVVGPHEAGESVTRACERGIRSKTAQKIRNGVRKNFSMHIGILHRPRLWCREATLNEIIKQTFCGVRDMTCFLVVCSFIL 93
The following BLAST results are available for this feature:
BLAST of EWM23063.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103881|gb|EWM23063.1|3.894e-62100.00hypothetical protein Naga_101297g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7630rna7630Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications