rna7626, rna7626 (mRNA) Nannochloropsis gaditana

Overview
Namerna7626
Unique Namerna7626
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1436
Alignment locationCM002472.1:415638..417174 -

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Properties
Property NameValue
Productzinc finger protein
Orig transcript idgnl|cribi|Naga_101466g2.1541.mrna
Orig protein idgnl|cribi|Naga_101466g2.1541
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:415638..417174 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101466g2gene7385Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7626rna7626-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23067.1cds7606Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7626 ID=rna7626|Name=rna7626|organism=Nannochloropsis gaditana|type=mRNA|length=1436bp
TGTCTTCCACCTCCAGGAAAATCCATCACTTTCCGCGCGTGCCGTTGGCG
TGCACAGCCCACACGTGGCTCGATACGCGCGTGAGTTTCGGGTTCCAGGT
CTGTACACTACTAGATGGGGGTCTCCACACAGAAGGCGCTAGCGTTCTCC
CCCCTCTATGACATGCATATACCACGGTCAAAAAACCCGCGCAGGGATCC
CATGCACCACGCGCTTGCCCCCGCCTGCCTGTTTCACAGCGTGCACACGG
TGCGTTAGTGGGCGTTGTGGCAGCCGGCTGGGCTCTGGGGGGGGAAGTTG
GGTGAATGACGGGCATTTGTAGCAGGAACGGAAAAATCATAAAGTGACAA
AGAGCTCAGCTTGGCACGGGATTGAGGTTTTCCTTTGGTAACATGAGGTC
CACGCCGCACCACCACTTCCCCACGTGTCATAGTCTTTAGAAGGTTGCAA
TGGCATGTATGCGAATGGTATTGCGGTCGTGGGTGGGTGTATTGGGGAAT
CGAGCAACGAAGCACGGCAAAGCTTGACTGAATCAACCGGAGCATAAGCC
GCCTTTGACAACAAAAGAGAGCACAGCGGGCAATGCTTCCAGGGCCACAC
GCGTTCCCGCATGTGACAAACCGCCTCACTTCACCCTCACTCCATTCTCC
ACACACATGTCTGCGCACAGGTGTTGTGTTCCTCCTCTTTGCCGCCTCGT
GCTTTTCGTGGGTGCAACAGCGGACCTCGCTACCTTCTCTGGTGTTGGTG
AACTACTTCGGACGGGTCTGACTCTCGGAACCAAGCAGCAACACACCGCC
ACAATCGAAGCGGCTACCAAACTTTGCGTCGGTTTTGTCGTCGTCGTGCT
CCGTGAGAAGCCGTCGACATTGCATCTGCGAACCATACCCGCCCCAAGTA
AAATGAGTTCCTTCAAGGCTGAGCATCCGTTAGGTAAGAAAGGGGAGGAG
GCATTCGTGGGGGGATACGACGAAGGAGGAATACCAACGACATGTCACCC
GTCTCATGTGCTTTCCTTTTTTGCGTTTCGTTTCCCCCTTTTGGCCACGC
CGTTCTGTTGTTTCCTTGCCGCAGACAAACGGAAGGGCGAGGCCGAGAAG
ATCTTGTCCAAGTACCCCGACCGGATCCCCGTCATTTGCGAGAAGGCGGA
CAGGAGCGAGATCCCGGACATTGACAAGAAAAAGTACCTGGTGCCTGCCG
ACCTGACAGTGGGTCAATTTACCTACGTGATTCGGAAACGCATCCGCCTC
CCCCCCGAGAAGGCCATATTCATCTTTGTCAACAACTACATTCCCCCCAC
CTGTACGGACCCCTTCCCTCCCACCCTCCCTCCCTTTCTCCCTTCCTTCC
TCCCTCCTTCCTTCCTTCCCCTTCAGGTCTATGGGCGGTGCTCGCGTGCA
AGAATTGGTCGTTCGCCTTCGGAACGTTTCACTGCT
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protein sequence of rna7626

>rna7626-protein ID=rna7626-protein|Name=rna7626|organism=Nannochloropsis gaditana|type=polypeptide|length=228bp
MLFSTSIHRIPLRLSANMQKAHITSQGRRATGAFQSLSLVRRAVITRPHR
IHSHHLLAIVHSTKKRNRNGSPFSIHLGHASFCSQKTSDDNRGPGARAET
TSTSPSPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYD
HGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEGPRAGGREG
GREQGREGGTNVKEGRNTDSGQNKRVAQ
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mRNA from alignment at CM002472.1:415638..417174-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7626 ID=rna7626|Name=rna7626|organism=Nannochloropsis gaditana|type=mRNA|length=1537bp|location=Sequence derived from alignment at CM002472.1:415638..417174- (Nannochloropsis gaditana)
GACGTATGTGTTGAGAGTGTCTGAGTGGTATTTCCATTTTTTAGTTTTAT
GTCTCAGAGCTTCGTCTCACAAGACATTACTTCTTGATTAAGGCGGACAT
GCATCGAAGCAGACTCAGTTTTATCCAAGCGAGGAGAAGTGGACGACGGG
GCAATGCTTGAAGTTTGCCAAGAGCATCGCATCATGTGTGATAGGACCTA
GTAGGACCAGTTACCCTATGATAAAGGCTTGCGTCCAAAGGCCTCTTTTG
ATTTCCATTCTACCGACGACCACGGTGTACAAAACTAACCACAAAACAAA
GTTATCCTAGCAACGAAAAAGCCTCCAATGCCCGTCCTCTTTTTCGCTAC
GAGCGTCAAGTACCTGTCTCCTCACAGTGTTGTCACCCCACGCATTCTAT
ACAGTTGACATTTCTATCCTCGTGAAAAGGCCAGAAGATGCTGTTTTCCA
CGTCCATTCACCGAATACCCTTGCGATTGTCGGCAAACATGCAAAAGGCT
CACATTACTTCACAAGGAAGACGAGCAACGGGAGCATTTCAATCCCTTTC
ATTGGTGCGGCGCGCGGTTATCACCAGACCACACCGAATCCATTCCCACC
ACCTTCTTGCCATCGTGCACAGCACGAAGAAAAGAAACAGAAATGGATCT
CCCTTCTCCATCCACCTCGGCCACGCCTCGTTCTGCTCCCAAAAAACCTC
GGACGACAACAGGGGCCCTGGGGCCCGGGCAGAGACCACTAGCACGTCGC
CCTCCCCTCCCTCGACATCCGCCACTCCCACGGACGTCCCCGGGGTCCAT
CATGCCACAAAACGCCTCGCAATTGTCTACACGTGCAAGGTATGCGCGGG
CCTTTCCCCCTCTCTGCCTGCCGTTCTTTGATCGTCCCGAGGCATCTTTG
AAGAACTCTACTCCCTATCTCCCTCCCTCCCTCCTTTTCACCGTCCCTTC
TTTGCCCCCAGGTGTGTCAGACCCGATCGGTCAAAGGCTTTTCCCAAGAA
GCCTACGACCACGGCGTCGTCCTTGTCAGGTGCCCGGGCTGCGACAATCT
GCACCTTATAGTCGACAGGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTTCCTTCCTCCCT
TCCACTCTGTGTCCGTTTATCGGAATGAGCCGGTCGTCACATGCGTGACT
CCGCTTTTCTATCCCTTCCCTCACCCTATTCAAGTCCACTGCTACACCAC
TCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCACCTC
CCTAATTTCCCCTGCAGACTCGGATGGTTTGAGGACGGGGGCACGGACAT
TCAAAAGATTTTGGCGGAGAAGGTTGGGGAGGGGCCAAGGGCGGGAGGGA
GGGAGGGAGGGAGGGAGCAAGGGAGGGAGGGAGGAACCAATGTAAAGGAG
GGGCGGAACACGGACTCGGGCCAAAACAAGAGAGTCGCTCAATGACATAT
TCGCCTCCTCTCCTTCCCAACTCCCCTCCCTCCTCCC
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Coding sequence (CDS) from alignment at CM002472.1:415638..417174-

>rna7626 ID=rna7626|Name=rna7626|organism=Nannochloropsis gaditana|type=CDS|length=2061bp|location=Sequence derived from alignment at CM002472.1:415638..417174- (Nannochloropsis gaditana)
ACTCGGATGGTTTGAGGACGGGGGCACGGACATTCAAAAGATTTTGGCGG
AGAAGGTTGGGGAGGGGCCAAGGGCGGGAGGGAGGGAGGGAGGGAGGGAG
CAAGGGAGGGAGGGAGGAACCAATGTAAAGGAGGGGCGGAACACGGACTC
GGGCCAAAACAAGAGAGTCGCTCAATGAGTGTGTCAGACCCGATCGGTCA
AAGGCTTTTCCCAAGAAGCCTACGACCACGGCGTCGTCCTTGTCAGGTGC
CCGGGCTGCGACAATCTGCACCTTATAGTCGACAGATGCTGTTTTCCACG
TCCATTCACCGAATACCCTTGCGATTGTCGGCAAACATGCAAAAGGCTCA
CATTACTTCACAAGGAAGACGAGCAACGGGAGCATTTCAATCCCTTTCAT
TGGTGCGGCGCGCGGTTATCACCAGACCACACCGAATCCATTCCCACCAC
CTTCTTGCCATCGTGCACAGCACGAAGAAAAGAAACAGAAATGGATCTCC
CTTCTCCATCCACCTCGGCCACGCCTCGTTCTGCTCCCAAAAAACCTCGG
ACGACAACAGGGGCCCTGGGGCCCGGGCAGAGACCACTAGCACGTCGCCC
TCCCCTCCCTCGACATCCGCCACTCCCACGGACGTCCCCGGGGTCCATCA
TGCCACAAAACGCCTCGCAATTGTCTACACGTGCAAGACTCGGATGGTTT
GAGGACGGGGGCACGGACATTCAAAAGATTTTGGCGGAGAAGGTTGGGGA
GGGGCCAAGGGCGGGAGGGAGGGAGGGAGGGAGGGAGCAAGGGAGGGAGG
GAGGAACCAATGTAAAGGAGGGGCGGAACACGGACTCGGGCCAAAACAAG
AGAGTCGCTCAATGAGTGTGTCAGACCCGATCGGTCAAAGGCTTTTCCCA
AGAAGCCTACGACCACGGCGTCGTCCTTGTCAGGTGCCCGGGCTGCGACA
ATCTGCACCTTATAGTCGACAGATGCTGTTTTCCACGTCCATTCACCGAA
TACCCTTGCGATTGTCGGCAAACATGCAAAAGGCTCACATTACTTCACAA
GGAAGACGAGCAACGGGAGCATTTCAATCCCTTTCATTGGTGCGGCGCGC
GGTTATCACCAGACCACACCGAATCCATTCCCACCACCTTCTTGCCATCG
TGCACAGCACGAAGAAAAGAAACAGAAATGGATCTCCCTTCTCCATCCAC
CTCGGCCACGCCTCGTTCTGCTCCCAAAAAACCTCGGACGACAACAGGGG
CCCTGGGGCCCGGGCAGAGACCACTAGCACGTCGCCCTCCCCTCCCTCGA
CATCCGCCACTCCCACGGACGTCCCCGGGGTCCATCATGCCACAAAACGC
CTCGCAATTGTCTACACGTGCAAGACTCGGATGGTTTGAGGACGGGGGCA
CGGACATTCAAAAGATTTTGGCGGAGAAGGTTGGGGAGGGGCCAAGGGCG
GGAGGGAGGGAGGGAGGGAGGGAGCAAGGGAGGGAGGGAGGAACCAATGT
AAAGGAGGGGCGGAACACGGACTCGGGCCAAAACAAGAGAGTCGCTCAAT
GAGTGTGTCAGACCCGATCGGTCAAAGGCTTTTCCCAAGAAGCCTACGAC
CACGGCGTCGTCCTTGTCAGGTGCCCGGGCTGCGACAATCTGCACCTTAT
AGTCGACAGATGCTGTTTTCCACGTCCATTCACCGAATACCCTTGCGATT
GTCGGCAAACATGCAAAAGGCTCACATTACTTCACAAGGAAGACGAGCAA
CGGGAGCATTTCAATCCCTTTCATTGGTGCGGCGCGCGGTTATCACCAGA
CCACACCGAATCCATTCCCACCACCTTCTTGCCATCGTGCACAGCACGAA
GAAAAGAAACAGAAATGGATCTCCCTTCTCCATCCACCTCGGCCACGCCT
CGTTCTGCTCCCAAAAAACCTCGGACGACAACAGGGGCCCTGGGGCCCGG
GCAGAGACCACTAGCACGTCGCCCTCCCCTCCCTCGACATCCGCCACTCC
CACGGACGTCCCCGGGGTCCATCATGCCACAAAACGCCTCGCAATTGTCT
ACACGTGCAAG
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Synonyms
Publications