EWM23067.1, cds7606 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|585103891|gb|EWM23067.1| (zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 469.544 bits (1207), Expect = 1.717e-167 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 1 MLFSTSIHRIPLRLSANMQKAHITSQGRRATGAFQSLSLVRRAVITRPHRIHSHHLLAIVHSTKKRNRNGSPFSIHLGHASFCSQKTSDDNRGPGARAETTSTSPSPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEGPRAGGREGGREQGREGGTNVKEGRNTDSGQNKRVAQ 228
MLFSTSIHRIPLRLSANMQKAHITSQGRRATGAFQSLSLVRRAVITRPHRIHSHHLLAIVHSTKKRNRNGSPFSIHLGHASFCSQKTSDDNRGPGARAETTSTSPSPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEGPRAGGREGGREQGREGGTNVKEGRNTDSGQNKRVAQ
Sbjct: 1 MLFSTSIHRIPLRLSANMQKAHITSQGRRATGAFQSLSLVRRAVITRPHRIHSHHLLAIVHSTKKRNRNGSPFSIHLGHASFCSQKTSDDNRGPGARAETTSTSPSPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEGPRAGGREGGREQGREGGTNVKEGRNTDSGQNKRVAQ 228
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|695403976|ref|XP_009523416.1| (hypothetical protein PHYSODRAFT_259700 [Phytophthora sojae] >gi|348680883|gb|EGZ20699.1| hypothetical protein PHYSODRAFT_259700 [Phytophthora sojae]) HSP 1 Score: 112.464 bits (280), Expect = 2.652e-27 Identity = 66/170 (38.82%), Postives = 91/170 (53.53%), Query Frame = 0
Query: 29 RATGAFQSLSLVRRAVITRPHRIHSHHLLAIVHSTKKRNRNGSPFSIHLGHASFCSQKTSDDNR----GPGARAETTSTSPSPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEGPR 194
R A Q R + ++P R+ S A+V +T + P F +Q + DDN P A AE+++ + +A + PGV + +VYTC VC+TRS K S+ AY GVVLVRCPGC+NLHL+ DRLGWFED TD++ +L +K GE R
Sbjct: 8 RCALALQPSHAASRLLPSQPLRLLSSTPSALVRAT---SAAFPPCRCSSHKRCFATQTSDDDNDSNSPAPAASAESSTEA------AADYSGAPGVESPGDKFVMVYTCSVCETRSAKTISKHAYYKGVVLVRCPGCENLHLVADRLGWFEDDSTDVESLLQQK-GEKVR 167
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|1214692535|gb|OWZ07118.1| (hypothetical protein PHMEG_00020536 [Phytophthora megakarya]) HSP 1 Score: 111.694 bits (278), Expect = 3.311e-27 Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 0
Query: 83 CSQKTSDDNRGPGARAETTSTSPSPPSTSATP-TDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEK 188
C SDDN P + +PS + SA+ + PGV ++ +VYTC VC+TRS K S+ AY GVVLVRCPGC+NLHL+ DRLGWFED GTD++ +L +K
Sbjct: 54 CFANQSDDNDTP-----PSPVAPSDSTDSASEHSGAPGVESPGEKFVMVYTCNVCETRSAKTISKHAYYKGVVLVRCPGCENLHLVADRLGWFEDDGTDVESLLQQK 155
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|953502021|emb|CEG36952.1| (zinc finger [Plasmopara halstedii]) HSP 1 Score: 109.768 bits (273), Expect = 1.368e-26 Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 0
Query: 106 SPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEK 188
SP + + T + VPGV + +VYTC VC+TRS K S+ AY GVVLVRCPGC+NLHLI DRLGWFED TD++ +L +K
Sbjct: 60 SPVTEATTISSVPGVESPGDKFVMVYTCSVCETRSAKTISKHAYYKGVVLVRCPGCENLHLIADRLGWFEDDATDVESLLKQK 142
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|675163143|ref|XP_008890456.1| (hypothetical protein PPTG_00743 [Phytophthora parasitica INRA-310] >gi|566033790|gb|ETI56701.1| hypothetical protein F443_00878 [Phytophthora parasitica P1569] >gi|567971448|gb|ETK96456.1| hypothetical protein L915_00819 [Phytophthora parasitica] >gi|567999778|gb|ETL49812.1| hypothetical protein L916_00809 [Phytophthora parasitica] >gi|568028943|gb|ETM02877.1| hypothetical protein L917_00777 [Phytophthora parasitica] >gi|568059602|gb|ETM56177.1| hypothetical protein L914_00807 [Phytophthora parasitica] >gi|568109784|gb|ETN24391.1| hypothetical protein PPTG_00743 [Phytophthora parasitica INRA-310] >gi|570337418|gb|ETO85366.1| hypothetical protein F444_00886 [Phytophthora parasitica P1976] >gi|570961483|gb|ETP26462.1| hypothetical protein F441_00854 [Phytophthora parasitica CJ01A1] >gi|570998204|gb|ETP54459.1| hypothetical protein F442_00832 [Phytophthora parasitica P10297] >gi|970630589|gb|KUF77475.1| DNL-type zinc finger protein [Phytophthora nicotianae] >gi|970650311|gb|KUF89378.1| DNL-type zinc finger protein [Phytophthora nicotianae] >gi|970661422|gb|KUF98894.1| Flagellar WD repeat-containing protein Pf20 [Phytophthora nicotianae]) HSP 1 Score: 107.457 bits (267), Expect = 1.519e-25 Identity = 58/129 (44.96%), Postives = 76/129 (58.91%), Query Frame = 0
Query: 75 IHLGHASF--------CSQKTSDDNRGPGARAETTSTSPSPPSTSATP-TDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEGPR 194
+H+ ASF C S D P + T+ S + SAT + PGV ++ +VYTC VC+TRS K S+ AY +GVVLVRCPGC+NLHL+ DRLGWFED TD++ +L +K GE R
Sbjct: 42 LHVSRASFPHLHSHSRCFATQSGDIEPP-----VSPTTSSESTVSATEYSGAPGVESPGEKFVMVYTCSVCETRSAKTISKHAYYNGVVLVRCPGCENLHLVADRLGWFEDDSTDVESLLKQK-GESVR 164
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|1173947650|gb|OQR95876.1| (hypothetical protein THRCLA_22059 [Thraustotheca clavata]) HSP 1 Score: 106.301 bits (264), Expect = 2.577e-25 Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 0
Query: 103 TSPSPPSTSATPTDV---PGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEG 192
+S +PP + P+ + PGV ++ ++YTC VC TR+ K S++AY HGVVLVRCP C+NLHLI DRLGWFED D+++IL K G+
Sbjct: 35 SSLTPPPSDGAPSGILNAPGVESKGEKFVMLYTCTVCDTRAAKTISKQAYYHGVVLVRCPKCENLHLIADRLGWFEDDSYDVEQILKAKGGQA 127
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|1102625940|emb|CRH03939.1| (zinc finger protein, putative [Plasmodium relictum]) HSP 1 Score: 106.301 bits (264), Expect = 2.009e-24 Identity = 42/66 (63.64%), Postives = 56/66 (84.85%), Query Frame = 0
Query: 127 LAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEKVGEG 192
L +++TCK+C+ RS K FS++AY +GVV++RCP CDNLHLI D+LGWF+DG T+I+KIL EK GEG
Sbjct: 167 LVLMFTCKICEKRSAKKFSKQAYYNGVVIIRCPSCDNLHLISDQLGWFQDGKTNIEKILEEK-GEG 231
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|855301756|ref|XP_012894217.1| (Zim17 [Blastocystis hominis] >gi|300120615|emb|CBK20169.2| Zim17 [Blastocystis hominis]) HSP 1 Score: 102.449 bits (254), Expect = 3.817e-24 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0
Query: 92 RGPGARAETTSTSPSPPSTSATPTDVPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEK 188
+ P ++ E + PS +PG + IV+TCKVC TRS + S+EAY+HGVVL+RCPGC+NLHLI D LG+F+D T++++ILA+K
Sbjct: 25 KNPDSKEEDARSREVLPS-------IPGSKTTDDVMIIVFTCKVCNTRSARKMSKEAYNHGVVLIRCPGCNNLHLIADHLGYFDDNSTNVEQILAQK 114
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|1032148710|gb|OAO12894.1| (Zim17-like protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 103.605 bits (257), Expect = 4.900e-24 Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 97 RAETTSTSPSPPSTSATPTD---------VPGVHHATKRLAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEK 188
R E+T+T P S P D +PG + IV+TC+VC TR+ + S+EAY+HGVVL+RCPGC+NLHLI D LG+F+D T+I++ILA+K
Sbjct: 59 RYESTTTLPET-EKSDKPRDARENEVLPSIPGAKTTNDVMIIVFTCRVCNTRAARKISKEAYNHGVVLIRCPGCNNLHLIADHLGYFDDNSTNIEQILAQK 158
BLAST of EWM23067.1 vs. NCBI_GenBank
Match: gi|1103664679|emb|CRG95717.1| (zinc finger protein, putative [Plasmodium gallinaceum]) HSP 1 Score: 103.605 bits (257), Expect = 2.627e-23 Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 0
Query: 127 LAIVYTCKVCQTRSVKGFSQEAYDHGVVLVRCPGCDNLHLIVDRLGWFEDGGTDIQKILAEK 188
L +++TCK+C+ +S K FS++AY +GVV++RCP CDNLHLI D+LGWF+DG T+I+KIL EK
Sbjct: 163 LVLMFTCKICEKKSAKKFSKQAYYNGVVIIRCPSCDNLHLISDQLGWFQDGKTNIEKILEEK 224 The following BLAST results are available for this feature:
BLAST of EWM23067.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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