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Properties
| Property Name | Value |
|---|
| Product | autophagy protein |
| Orig transcript id | gnl|cribi|Naga_101558g1.3760.mrna |
| Orig protein id | gnl|cribi|Naga_101558g1.3760 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:412799..414412 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7625 ID=rna7625|Name=rna7625|organism=Nannochloropsis gaditana|type=mRNA|length=456bp
ATGAGGCGTGGTGATGAATGTGGAGTGAGGCGAAGTGTCTGTACAGGTCG
TGGTGGGAGGGAAGATGATACGGAGGAACGAATGCGAGCACACATCCTGT
GGCTTGGAGGGATGGGGGGATGTAACGGGACTCAAGTGGGCACGAGGCAA
CGACTCGGTGATGGGGAAAGAAGGAAGACGGGGGTAGGAGGTGCTTGCGA
GGAGGAGGAGGGAGGAAGAGGAGAGGGAGGAGGGAGGCGCGGGCGTCTAA
GGAAGCAAGGGGCCTACAGGGGAGGGAAGAGGCCTACAGGGGAGGGAAGA
GGGAGGATGGGGATGGAAGAGGGGAGAGATACCATTCCTCTCCTCGCGTG
CCTGTGGACCGAGAGCGACCGGGATCCGCGAGGAAGGAAGTGCGGACAAG
GGGAGGTGCCGGCGGTGGAAATCAATCATGAGGAGACATGGGGAGAAATG
GGCTGA back to topprotein sequence of rna7625 >rna7625-protein ID=rna7625-protein|Name=rna7625|organism=Nannochloropsis gaditana|type=polypeptide|length=260bp
MSAHRCCVPPLCRLVLFVGATADLATFSGVGELLRTGLTLGTKQQHTATI
EAATKLCVGFVVVVLREKPSTLHLRTIPAPSKMSSFKAEHPLGKKGEEAF
VGGYDEGGIPTTCHPSHVLSFFAFRFPLLATPFCCFLAADKRKGEAEKIL
SKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPP
EKAIFIFVNNYIPPTCTDPFPPTLPPFLPSFLPPSFLPLQVYGRCSRARI
GRSPSERFTA back to topmRNA from alignment at CM002472.1:412799..414412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7625 ID=rna7625|Name=rna7625|organism=Nannochloropsis gaditana|type=mRNA|length=1614bp|location=Sequence derived from alignment at CM002472.1:412799..414412- (Nannochloropsis gaditana)
TGTCTTCCACCTCCAGGAAAATCCATCACTTTCCGCGCGTGCCGTTGGCG
TGCACAGCCCACACGTGGCTCGATACGCGCGTGAGTTTCGGGTTCCAGGT
CTGTACACTACTAGATGGGGGTCTCCACACAGAAGGCGCTAGCGTTCTCC
CCCCTCTATGACATGCATATACCACGGTCAAAAAACCCGCGCAGGGATCC
CATGCACCACGCGCTTGCCCCCGCCTGCCTGTTTCACAGCGTGCACACGG
TGCGTTAGTGGGCGTTGTGGCAGCCGGCTGGGCTCTGGGGGGGGAAGTTG
GGTGAATGACGGGCATTTGTAGCAGGAACGGAAAAATCATAAAGTGACAA
AGAGCTCAGCTTGGCACGGGATTGAGGTTTTCCTTTGGTAACATGAGGTC
CACGCCGCACCACCACTTCCCCACGTGTCATAGTCTTTAGAAGGTTGCAA
TGGCATGTATGCGAATGGTATTGCGGTCGTGGGTGGGTGTATTGGGGAAT
CGAGCAACGAAGCACGGCAAAGCTTGACTGAATCAACCGGAGCATAAGCC
GCCTTTGACAACAAAAGAGAGCACAGCGGGCAATGCTTCCAGGGCCACAC
GCGTTCCCGCATGTGACAAACCGCCTCACTTCACCCTCACTCCATTCTCC
ACACACATGTCTGCGCACAGGTGTTGTGTTCCTCCTCTTTGCCGCCTCGT
GCTTTTCGTGGGTGCAACAGCGGACCTCGCTACCTTCTCTGGTGTTGGTG
AACTACTTCGGACGGGTCTGACTCTCGGAACCAAGCAGCAACACACCGCC
ACAATCGAAGCGGCTACCAAACTTTGCGTCGGTTTTGTCGTCGTCGTGCT
CCGTGAGAAGCCGTCGACATTGCATCTGCGAACCATACCCGCCCCAAGTA
AAATGAGTTCCTTCAAGGCTGAGCATCCGTTAGGTAAGAAAGGGGAGGAG
GCATTCGTGGGGGGATACGACGAAGGAGGAATACCAACGACATGTCACCC
GTCTCATGTGCTTTCCTTTTTTGCGTTTCGTTTCCCCCTTTTGGCCACGC
CGTTCTGTTGTTTCCTTGCCGCAGACAAACGGAAGGGCGAGGCCGAGAAG
ATCTTGTCCAAGTACCCCGACCGGATCCCCGTCATTTGCGAGAAGGCGGA
CAGGAGCGAGATCCCGGACATTGACAAGAAAAAGTACGGGAGGGGAGGGC
CGCGGAGACGGGAAGACAGAGCGGGGATAAGGGAACATGCATGTGCCCCC
CGGCGTGTTGGGTGAACCACGGCTCGCACCCCCGTTGGCCCGCTTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTAACGCTCACCCCTACCTCTGCCC
CCTCTTGTCAGGTACCTGGTGCCTGCCGACCTGACAGTGGGTCAATTTAC
CTACGTGATTCGGAAACGCATCCGCCTCCCCCCCGAGAAGGCCATATTCA
TCTTTGTCAACAACTACATTCCCCCCACCTGTACGGACCCCTTCCCTCCC
ACCCTCCCTCCCTTTCTCCCTTCCTTCCTCCCTCCTTCCTTCCTTCCCCT
TCAGGTCTATGGGCGGTGCTCGCGTGCAAGAATTGGTCGTTCGCCTTCGG
AACGTTTCACTGCT back to topCoding sequence (CDS) from alignment at CM002472.1:412799..414412- >rna7625 ID=rna7625|Name=rna7625|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at CM002472.1:412799..414412- (Nannochloropsis gaditana)
GTACCTGGTGCCTGCCGACCTGACAGTGGGTCAATTTACCTACGTGATTC
GGAAACGCATCCGCCTCCCCCCCGAGAAGGCCATATTCATCTTTGTCAAC
AACTACATTCCCCCCACCTGTACGGACCCCTTCCCTCCCACCCTCCCTCC
CTTTCTCCCTTCCTTCCTCCCTCCTTCCTTCCTTCCCCTTCAGGTCTATG
GGCGGTGCTCGCGTGCAAGAATTGGTCGTTCGCCTTCGGAACGTTTCACT
GCTATGTCTGCGCACAGGTGTTGTGTTCCTCCTCTTTGCCGCCTCGTGCT
TTTCGTGGGTGCAACAGCGGACCTCGCTACCTTCTCTGGTGTTGGTGAAC
TACTTCGGACGGGTCTGACTCTCGGAACCAAGCAGCAACACACCGCCACA
ATCGAAGCGGCTACCAAACTTTGCGTCGGTTTTGTCGTCGTCGTGCTCCG
TGAGAAGCCGTCGACATTGCATCTGCGAACCATACCCGCCCCAAGTAAAA
TGAGTTCCTTCAAGGCTGAGCATCCGTTAGGTAAGAAAGGGGAGGAGGCA
TTCGTGGGGGGATACGACGAAGGAGGAATACCAACGACATGTCACCCGTC
TCATGTGCTTTCCTTTTTTGCGTTTCGTTTCCCCCTTTTGGCCACGCCGT
TCTGTTGTTTCCTTGCCGCAGACAAACGGAAGGGCGAGGCCGAGAAGATC
TTGTCCAAGTACCCCGACCGGATCCCCGTCATTTGCGAGAAGGCGGACAG
GAGCGAGATCCCGGACATTGACAAGAAAAAGTACCTGGTGCCTGCCGACC
TGACAGTGGGTCAATTTACCTACGTGATTCGGAAACGCATCCGCCTCCCC
CCCGAGAAGGCCATATTCATCTTTGTCAACAACTACATTCCCCCCACCTG
TACGGACCCCTTCCCTCCCACCCTCCCTCCCTTTCTCCCTTCCTTCCTCC
CTCCTTCCTTCCTTCCCCTTCAGGTCTATGGGCGGTGCTCGCGTGCAAGA
ATTGGTCGTTCGCCTTCGGAACGTTTCACTGCTATGTCTGCGCACAGGTG
TTGTGTTCCTCCTCTTTGCCGCCTCGTGCTTTTCGTGGGTGCAACAGCGG
ACCTCGCTACCTTCTCTGGTGTTGGTGAACTACTTCGGACGGGTCTGACT
CTCGGAACCAAGCAGCAACACACCGCCACAATCGAAGCGGCTACCAAACT
TTGCGTCGGTTTTGTCGTCGTCGTGCTCCGTGAGAAGCCGTCGACATTGC
ATCTGCGAACCATACCCGCCCCAAGTAAAATGAGTTCCTTCAAGGCTGAG
CATCCGTTAGGTAAGAAAGGGGAGGAGGCATTCGTGGGGGGATACGACGA
AGGAGGAATACCAACGACATGTCACCCGTCTCATGTGCTTTCCTTTTTTG
CGTTTCGTTTCCCCCTTTTGGCCACGCCGTTCTGTTGTTTCCTTGCCGCA
GACAAACGGAAGGGCGAGGCCGAGAAGATCTTGTCCAAGTACCCCGACCG
GATCCCCGTCATTTGCGAGAAGGCGGACAGGAGCGAGATCCCGGACATTG
ACAAGAAAAA back to top
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