EWM23068.1, cds7605 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|585103894|gb|EWM23068.1| (autophagy protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
Query: 1 MSAHRCCVPPLCRLVLFVGATADLATFSGVGELLRTGLTLGTKQQHTATIEAATKLCVGFVVVVLREKPSTLHLRTIPAPSKMSSFKAEHPLGKKGEEAFVGGYDEGGIPTTCHPSHVLSFFAFRFPLLATPFCCFLAADKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTCTDPFPPTLPPFLPSFLPPSFLPLQVYGRCSRARIGRSPSERFTA 260
MSAHRCCVPPLCRLVLFVGATADLATFSGVGELLRTGLTLGTKQQHTATIEAATKLCVGFVVVVLREKPSTLHLRTIPAPSKMSSFKAEHPLGKKGEEAFVGGYDEGGIPTTCHPSHVLSFFAFRFPLLATPFCCFLAADKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTCTDPFPPTLPPFLPSFLPPSFLPLQVYGRCSRARIGRSPSERFTA
Sbjct: 1 MSAHRCCVPPLCRLVLFVGATADLATFSGVGELLRTGLTLGTKQQHTATIEAATKLCVGFVVVVLREKPSTLHLRTIPAPSKMSSFKAEHPLGKKGEEAFVGGYDEGGIPTTCHPSHVLSFFAFRFPLLATPFCCFLAADKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTCTDPFPPTLPPFLPSFLPPSFLPLQVYGRCSRARIGRSPSERFTA 260
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|397567046|gb|EJK45363.1| (hypothetical protein THAOC_36026 [Thalassiosira oceanica]) HSP 1 Score: 147.132 bits (370), Expect = 5.433e-40 Identity = 77/130 (59.23%), Postives = 88/130 (67.69%), Query Frame = 0
Query: 86 FKAEHPLGKKGEEAFVGGYDEGGIPTTCHPSHVLSFFAFRFPLLATPFCCFLAADKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPT 215
FK EHPLG G GG+D + T CH + L P C +KRK EAE+I KYPDR+PVICEKADRS+IPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKA+F+F +N IPP
Sbjct: 64 FKEEHPLGNAG-----GGFD--NLSTLCHHRRR----TLQLTLSDVPNCT-CTTEKRKSEAERIRGKYPDRVPVICEKADRSDIPDIDKKKYLVPADLTVGQFHYVIRKRIQLAPEKALFLFCSNNIPPN 181
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|673037584|ref|XP_008872753.1| (hypothetical protein H310_08680 [Aphanomyces invadans] >gi|574471549|gb|ETV98556.1| hypothetical protein H310_08680 [Aphanomyces invadans]) HSP 1 Score: 138.272 bits (347), Expect = 9.117e-38 Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0
Query: 140 DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTCT 217
+KR+ EA++I SKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT +
Sbjct: 11 EKRQAEAQRIRSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAS 88
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|698798870|ref|XP_009832464.1| (hypothetical protein H257_08331 [Aphanomyces astaci] >gi|574112635|gb|ETV78127.1| hypothetical protein H257_08331 [Aphanomyces astaci]) HSP 1 Score: 137.887 bits (346), Expect = 1.195e-37 Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 140 DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+KR+ EA++I SKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT
Sbjct: 11 EKRQAEAQRIRSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTA 87
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|1173955555|gb|OQS02504.1| (autophagy-related protein [Thraustotheca clavata]) HSP 1 Score: 136.346 bits (342), Expect = 3.376e-37 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 140 DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+KR+ EA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT
Sbjct: 11 EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTA 87
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|301117470|ref|XP_002906463.1| (autophagy-related protein, putative [Phytophthora infestans T30-4] >gi|675201517|ref|XP_008909643.1| hypothetical protein PPTG_14822 [Phytophthora parasitica INRA-310] >gi|675201519|ref|XP_008909644.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|695375289|ref|XP_009515510.1| hypothetical protein PHYSODRAFT_353495 [Phytophthora sojae] >gi|62899789|sp|Q8H715.1|ATG8_PHYIN RecName: Full=Autophagy-related protein 8; AltName: Full=Autophagy-related ubiquitin-like modifier ATG8; Flags: Precursor >gi|23394382|gb|AAN31480.1| microtubial binding protein [Phytophthora infestans] >gi|262107812|gb|EEY65864.1| autophagy-related protein, putative [Phytophthora infestans T30-4] >gi|348688421|gb|EGZ28235.1| hypothetical protein PHYSODRAFT_353495 [Phytophthora sojae] >gi|566017603|gb|ETI40514.1| hypothetical protein F443_14127 [Phytophthora parasitica P1569] >gi|566017604|gb|ETI40515.1| hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567954982|gb|ETK80615.1| hypothetical protein L915_13769 [Phytophthora parasitica] >gi|567954983|gb|ETK80616.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567983651|gb|ETL34038.1| hypothetical protein L916_13666 [Phytophthora parasitica] >gi|567983652|gb|ETL34039.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568013137|gb|ETL87314.1| hypothetical protein L917_13474 [Phytophthora parasitica] >gi|568013138|gb|ETL87315.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568043245|gb|ETM40540.1| hypothetical protein L914_13559 [Phytophthora parasitica] >gi|568043246|gb|ETM40541.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568090338|gb|ETN05173.1| hypothetical protein PPTG_14822 [Phytophthora parasitica INRA-310] >gi|568090339|gb|ETN05174.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570321299|gb|ETO69247.1| hypothetical protein F444_14157 [Phytophthora parasitica P1976] >gi|570321300|gb|ETO69248.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570945033|gb|ETP10290.1| hypothetical protein F441_14055 [Phytophthora parasitica CJ01A1] >gi|570945034|gb|ETP10291.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570976664|gb|ETP38432.1| hypothetical protein F442_13973 [Phytophthora parasitica P10297] >gi|570976665|gb|ETP38433.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970642449|gb|KUF84121.1| Autophagy-related protein 8 [Phytophthora nicotianae] >gi|1214713801|gb|OWZ24681.1| Autophagy-related protein [Phytophthora megakarya]) HSP 1 Score: 136.346 bits (342), Expect = 3.656e-37 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 140 DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+KR+ EA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT
Sbjct: 11 EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTA 87
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|953502622|emb|CEG36286.1| (autophagy-related protein 8 precursor [Plasmopara halstedii]) HSP 1 Score: 137.117 bits (344), Expect = 4.692e-37 Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0
Query: 129 LATPFCCFLAA-------DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+ +P+ +++ +KR+ EA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT
Sbjct: 20 IKSPYIAVMSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTA 114
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|813198779|ref|XP_012208972.1| (autophagy-like protein 8 [Saprolegnia parasitica CBS 223.65] >gi|641525894|gb|KDO20302.1| autophagy-like protein 8 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 135.961 bits (341), Expect = 5.114e-37 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 140 DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+KR+ EA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT
Sbjct: 11 EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTA 87
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|669141776|ref|XP_008606450.1| (autophagy-like protein 8 [Saprolegnia diclina VS20] >gi|530741734|gb|EQC39976.1| autophagy-like protein 8 [Saprolegnia diclina VS20]) HSP 1 Score: 135.961 bits (341), Expect = 5.329e-37 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 140 DKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+KR+ EA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADLTVGQF YVIRKRI+L PEKAIFIF+NN +PPT
Sbjct: 11 EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTA 87
BLAST of EWM23068.1 vs. NCBI_GenBank
Match: gi|298713025|emb|CBJ33449.1| (Microtubule-associated anchor protein involved in autophagy and membrane trafficking [Ectocarpus siliculosus]) HSP 1 Score: 135.576 bits (340), Expect = 5.958e-37 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0
Query: 138 AADKRKGEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTC 216
+ADKRK EAE+I +KYPDRIPVICEKADRS+IPDIDKKKYLVPADL+ GQF YVIRKRI+L PEKAIFIFVN+ IP T
Sbjct: 9 SADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTS 87 The following BLAST results are available for this feature:
BLAST of EWM23068.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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