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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101475g2.3510.mrna |
| Orig protein id | gnl|cribi|Naga_101475g2.3510 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:379883..382289 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7615 ID=rna7615|Name=rna7615|organism=Nannochloropsis gaditana|type=mRNA|length=498bp
ATGGCGACGGTCTCCCTCCGCGGGACAGAGCCCCGGTCCAATGGCGGCAG
TCATGCCAATCCCAACTATACCTATGATCTGATCGTCATTGGTGGAGGTA
GTGGAGGTCTGGCCGCCGCCAAAGAAGCGGCCAAGCACGGGGCAAAAGTC
GCCCTCTTTGACTATGTGAAGCCCTCCACTCAGGGTAGTAAGTGGGGACT
GGGGGGTACCTGTGTGAATGTGGGCTGCGTCCCTAAGAAAATCTGCCATT
ACTCCGGCCTTTTGGGGCATGCCATCAAGGACGCCCAAGCCCTAGGCTGG
ACGTTTGGTGACCCCAAACCGGCTCATGATTGGGAAGGCTTATCGTCGCC
CGTGCGGGATCACCGCGGTATGTTGAATTTCCTCTACCGGCGGGGGCTTC
AGAGCGCCCACGTGGAGTACATCAACGCCCTGACGGCCTTCACGGGCCCG
CACTCGGTCACTTACCTGCCCAAGGGGAAGGAGGAAGGGGAGGAGTAA back to topprotein sequence of rna7615 >rna7615-protein ID=rna7615-protein|Name=rna7615|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MSTQGNGGTLPLPLLSIPRNDSCDKRICSNAWGGGNVFYVMPTWDVDNSL
SHPKPIEPQPPASNSPIHVLHPLWLRGGCRQSCCGRLRHHHAVQSRSPGP
RPSHRPVPRQALHADHGPSCLARCGHLLRQGQYGRGECLHPVRA back to topmRNA from alignment at CM002472.1:379883..382289+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7615 ID=rna7615|Name=rna7615|organism=Nannochloropsis gaditana|type=mRNA|length=2407bp|location=Sequence derived from alignment at CM002472.1:379883..382289+ (Nannochloropsis gaditana)
ctcctcctcctcctctctctctctctctctctctctctctcttttgcATT
GTGCTCCCTGCTGGCTGGCCTTGCATGCAAAGTCTGACCAGGGGCCAGAC
CACGtcgtcccttcttttcctaacctccgccctccctccctccctacctc
cctccctccctcaaggtGCCTAGCCAAGCTCGTCTGTCTCAAGCAGGAAG
ACAACAAGGTGGTAGGCTTTCACTTCGTCGGGCCCAATGCCGGGGAGATC
ACGCAGGGATTCCACCTGGCCATGAAggtccgccctccttccctccctcc
ccccctccctccgtccctgtcccccccccctcccctcccttgatCCCTTT
GTCAAGTCCTCGACCTATCCTGCCATGGGGTCGGCATTCATGCTTCATAA
TGCCTCatcttccctcttgccccttcctcccttcctcccttcctcccttc
ctcccttccttagCTTGGAGCCAAGAAAGCTGACTTTGACGACATGATCG
GGATACATCCCACGGACGCCGaggccttcgcctccctgcACACGACCAAA
GCCAGTGGAGAGAGCTGGTTGAACGTCGGttgtggtggagggaaatgTGG
CTGAAGCGAgaaaaaagggcgggaggaggatggggctTCTTGCTGGGGAT
TGGGGGAAGAGATCTTTTTCGTCTCCCACGGCCCGATGTGCGCActcacg
agggagggatcgatgaaaagagagaaagtgGGCGGGTACGGTGAAGAGAA
AATTGGGAACATAAGATGATTTCACATCGTTTTTGTCGATCACGTTCCTG
CTTGCCAAAGTATGTGGGGTGATTTTGATAATTTTCTAAAAGGAGGGGTA
TCgtaggggagaaggaaggaagaggggggaggttaaaaaaGAAGACGGAG
ACAAAAGGATGAGGACGGGTTTttgaggaaaaggcagcaaGGGTTCGGGG
TCAAGAGGTGAAACACAGCATTCGTGTGCGTGACAACTAGTGAAAGCAAC
GATCGACTGGACGCGAGCAAATGACGGGATGTGccagtgcctccctccat
cctcagaCTGCGATATTGGGTCATGTCACGCTGGGCTTATTTATGTCAAA
CAAAAAGTTCCTTCTACGAATGCGACCCTGCCATCGACCCAACCGCGTGC
AATGAGCCTGCAGGCGCGTTATGTCTACGCAAGGCAATGGAGGCACGCTT
CCACTGCCTTTACTGTCCATTCCCAGGAATGATTCATGCGATAAAAGGAT
TTGCTCAAATgcgtggggcggggggaacgTGTTCTATGTGATGCCTACTT
GGGACGTGGACAACAGTCTCTCACACCCAAAGCCCATTGAACCCCAACCA
CCAGCGTCCAACTCTCCCATCCATGTCTTGCATCCCTTGTGGCTCCGCGG
CGGCTGCCGCCAAAGCTGTTGTGGTACGTATGAGCTTGCGTAAGGGGGAG
TATCGAGGTTCTTCGGCGGTCGCCTGCGGAAATGCGCGTCGGCCCTGGAT
CCTGTTGTCTTGCAAAGGGATGTGGGGTATCGCAAAGCAAACACATGCCT
CTTGTGCACGGAGCCGTGCACTCATCTGACGCCAAGTCTCTTGTGCCATG
GCAGGGAAGGATTGGTTGGATGTGTGGTTTGAGGGATAAGGTTTATGGGT
AGCGGCTCGAGGAGGATCAAGGCTCGGGGCTCTGACGCTGTCGCGCCGTG
CACTCATCGTTTCCACAGAACCGTTGACGCTCTTTTCCATCTGCATTTAA
CCATCTTTTCCAACCATGGCACATGCGTAGGCCGTCTCCGACACCACCAT
GCCGTCCAAAGCCGAAGTCCAGGCCCGAGGCCTTCTCATCGACCTGTACC
GGTAAGGCAATAGAACACGATTCCCGGGGggcagacggggaggagTCCGC
TGAGGTCATCCCCTCAGCTGCCGTGGCAAAGTTTTTCCATTTCCGTGCCC
GACATGCTCCCGTGTTTGACTGTATCACAAGCATACACCAAGGTTCTTTC
GGCTTGGGTGGAAACGTTGTGGCGTGCCAGCACGCTCGATGCGTCAGGCG
CTGGAAGCGAAgaacctccttcccgaaCATTCTACTCCTCTGTTTCACTC
AataccctcctttcccccgctttctccccATGCCTAGCGCCAAGCCCTGC
ATGCCGATCATGGTCCGTCTTGCCTGGCACGATGCGGGCACCTTTTGCGC
CAAGGACAATACGGGCGGGGCGAATGCCTCCATCCGGTTCGAGCCTGAGA
TTTCCCACGGGGCCAACGCGGGATTGACTGCGGCGACCCAGCTCATGCAG
GTACGTGAGTGCTGTTGGCATGGAATGTATGGTATTTGGGACAAATAAAG
TCAAGAGAAGTGCCTGGTTGAGGAACGTTTGGGCGCTTGCACAGCTGGGA
GTCCTCT back to topCoding sequence (CDS) from alignment at CM002472.1:379883..382289+ >rna7615 ID=rna7615|Name=rna7615|organism=Nannochloropsis gaditana|type=CDS|length=1305bp|location=Sequence derived from alignment at CM002472.1:379883..382289+ (Nannochloropsis gaditana)
ATGTCTACGCAAGGCAATGGAGGCACGCTTCCACTGCCTTTACTGTCCAT
TCCCAGGAATGATTCATGCGATAAAAGGATTTGCTCAAATgcgtggggcg
gggggaacgTGTTCTATGTGATGCCTACTTGGGACGTGGACAACAGTCTC
TCACACCCAAAGCCCATTGAACCCCAACCACCAGCGTCCAACTCTCCCAT
CCATGTCTTGCATCCCTTGTGGCTCCGCGGCGGCTGCCGCCAAAGCTGTT
GTGGCCGTCTCCGACACCACCATGCCGTCCAAAGCCGAAGTCCAGGCCCG
AGGCCTTCTCATCGACCTGTACCGCGCCAAGCCCTGCATGCCGATCATGG
TCCGTCTTGCCTGGCACGATGCGGGCACCTTTTGCGCCAAGGACAATACG
GGCGGGGCGAATGCCTCCATCCGGTTCGAGCCTGAATGTCTACGCAAGGC
AATGGAGGCACGCTTCCACTGCCTTTACTGTCCATTCCCAGGAATGATTC
ATGCGATAAAAGGATTTGCTCAAATgcgtggggcggggggaacgTGTTCT
ATGTGATGCCTACTTGGGACGTGGACAACAGTCTCTCACACCCAAAGCCC
ATTGAACCCCAACCACCAGCGTCCAACTCTCCCATCCATGTCTTGCATCC
CTTGTGGCTCCGCGGCGGCTGCCGCCAAAGCTGTTGTGGCCGTCTCCGAC
ACCACCATGCCGTCCAAAGCCGAAGTCCAGGCCCGAGGCCTTCTCATCGA
CCTGTACCGCGCCAAGCCCTGCATGCCGATCATGGTCCGTCTTGCCTGGC
ACGATGCGGGCACCTTTTGCGCCAAGGACAATACGGGCGGGGCGAATGCC
TCCATCCGGTTCGAGCCTGAATGTCTACGCAAGGCAATGGAGGCACGCTT
CCACTGCCTTTACTGTCCATTCCCAGGAATGATTCATGCGATAAAAGGAT
TTGCTCAAATgcgtggggcggggggaacgTGTTCTATGTGATGCCTACTT
GGGACGTGGACAACAGTCTCTCACACCCAAAGCCCATTGAACCCCAACCA
CCAGCGTCCAACTCTCCCATCCATGTCTTGCATCCCTTGTGGCTCCGCGG
CGGCTGCCGCCAAAGCTGTTGTGGCCGTCTCCGACACCACCATGCCGTCC
AAAGCCGAAGTCCAGGCCCGAGGCCTTCTCATCGACCTGTACCGCGCCAA
GCCCTGCATGCCGATCATGGTCCGTCTTGCCTGGCACGATGCGGGCACCT
TTTGCGCCAAGGACAATACGGGCGGGGCGAATGCCTCCATCCGGTTCGAG
CCTGA back to top
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