EWM23078.1, cds7595 (CDS) Nannochloropsis gaditana

Overview
NameEWM23078.1
Unique Namecds7595
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:381053..381305 +
Alignment locationCM002472.1:381663..381733 +
Alignment locationCM002472.1:382020..382130 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23078.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101475g2.3510.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:381053..381305 +
CM002472.1supercontigCM002472.1:381663..381733 +
CM002472.1supercontigCM002472.1:382020..382130 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23078.1 vs. NCBI_GenBank
Match: gi|585103921|gb|EWM23078.1| (hypothetical protein Naga_101475g2 [Nannochloropsis gaditana])

HSP 1 Score: 290.812 bits (743), Expect = 1.591e-99
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 
Query:    1 MSTQGNGGTLPLPLLSIPRNDSCDKRICSNAWGGGNVFYVMPTWDVDNSLSHPKPIEPQPPASNSPIHVLHPLWLRGGCRQSCCGRLRHHHAVQSRSPGPRPSHRPVPRQALHADHGPSCLARCGHLLRQGQYGRGECLHPVRA 144
            MSTQGNGGTLPLPLLSIPRNDSCDKRICSNAWGGGNVFYVMPTWDVDNSLSHPKPIEPQPPASNSPIHVLHPLWLRGGCRQSCCGRLRHHHAVQSRSPGPRPSHRPVPRQALHADHGPSCLARCGHLLRQGQYGRGECLHPVRA
Sbjct:    1 MSTQGNGGTLPLPLLSIPRNDSCDKRICSNAWGGGNVFYVMPTWDVDNSLSHPKPIEPQPPASNSPIHVLHPLWLRGGCRQSCCGRLRHHHAVQSRSPGPRPSHRPVPRQALHADHGPSCLARCGHLLRQGQYGRGECLHPVRA 144
The following BLAST results are available for this feature:
BLAST of EWM23078.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103921|gb|EWM23078.1|1.591e-99100.00hypothetical protein Naga_101475g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7615rna7615Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications