rna7609, rna7609 (mRNA) Nannochloropsis gaditana

Overview
Namerna7609
Unique Namerna7609
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length869
Alignment locationCM002472.1:369157..369484 +

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Properties
Property NameValue
Productnad-dependent malic
Orig transcript idgnl|cribi|Naga_103832g1.10177.mrna
Orig protein idgnl|cribi|Naga_103832g1.10177
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:369157..369484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103832g1gene7367Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7609rna7609-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23084.1cds7589Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7609 ID=rna7609|Name=rna7609|organism=Nannochloropsis gaditana|type=mRNA|length=869bp
CCCCGCACGCTCACTCGCACAACGTGTTGTTTTCCTTCACACGTCTTTCC
ACGCCCGGGCAACCACATGACAGCGTCCCAATGTTGGCACACGCGGCACG
CTTGCCTGGCCTTTCTGGGTTGCCGCCCCGACATGCCTTCAGCACGCTTT
CTCGAGTCTCACTGTCGCCGCTAGCGATGATCGGAGGGAGATGCCAGGGG
CGCCGTCAAGACGGCGTTGGAAATCATCAACAAAGGCAGGTTGGGTCGCC
ACGTCGGGCGTTTTCTTCCCAGCACCACTCGACGCAGTCTCTGACCTGTC
CGTTGCACCCCGTGCATTGGAAAGGGCATAATTACAAGCCTTTGCTCGTC
AAAAAGAGGGGGGTGGATATCGTCCAGGATCCTCTGTACAACAAGGGCAC
TGGCTTCCAGCATGGGGAACGGGACCGACTGAACATCCGAGGGCTTCTGC
CGCCCCGTTACTTGGACTTTAAGACGCAGATTGACCGGGTCATGTCCAAT
TTGAGGAACCAGGGGGACGACATGCGGAAACACATCTACTTGACCGAGCT
GCATGACCGCAACGAGACCCTCTTCCACCGGGTCATTGTCGACAACATCG
AGGAGCTGGCCCCCATCATATACACGCCGACGGTGGGGAGAGCCTGCGTG
GAGTTCGGGCAGCATTTCCGGCGACCAAGGGGCATGTATTTCTCCACCAT
GGACCGCGGCCATTTTGCCAGCATGATGTACAACTGGCCTCAACGGGAGG
TGCACGTCATCGTTGTAACAGACGGAAGCCGGATTTTGGGCCTCGGAGAT
TTGGGGGCAAACGGCGCCGGAATTCCGATCGGGAAGCTCGCGCTCTATTG
TGCCGCCGGTAAGGAAAAG
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protein sequence of rna7609

>rna7609-protein ID=rna7609-protein|Name=rna7609|organism=Nannochloropsis gaditana|type=polypeptide|length=93bp
MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLS
AQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAYFP
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mRNA from alignment at CM002472.1:369157..369484+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7609 ID=rna7609|Name=rna7609|organism=Nannochloropsis gaditana|type=mRNA|length=328bp|location=Sequence derived from alignment at CM002472.1:369157..369484+ (Nannochloropsis gaditana)
ATGTGCGACAAGGACGGCCTCTTGGGCCAAGCGCGCCAGAACCGCTTGAC
CTCGCAACAGCTCGAATTCATGCGTTCCGACCtccccgacggcctccccc
tcctggagGTGGCGAAACGTGTCCGCCCCACGATCCTTCTCGGTCTGAGC
GCCCAGCGTGGCTTGTTCAAGGAGGAACTGGTGAGGGAAATCGCGCGGCA
CACCCCGCGTCCTtttgtcttccccctctccaaccccaccacctccgcgg
AATGCACGCCCTCGGAGGCCTACTTGTGGACGGGGGGCCGGGCCCTGTTc
gcctccgggtcgcctttCGAGCCCGTGA
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Coding sequence (CDS) from alignment at CM002472.1:369157..369484+

>rna7609 ID=rna7609|Name=rna7609|organism=Nannochloropsis gaditana|type=CDS|length=564bp|location=Sequence derived from alignment at CM002472.1:369157..369484+ (Nannochloropsis gaditana)
ATGTGCGACAAGGACGGCCTCTTGGGCCAAGCGCGCCAGAACCGCTTGAC
CTCGCAACAGCTCGAATTCATGCGTTCCGACCtccccgacggcctccccc
tcctggagGTGGCGAAACGTGTCCGCCCCACGATCCTTCTCGGTCTGAGC
GCCCAGCGTGGCTTGTTCAAGGAGGAACTGGTGAGGGAAATCGCGCGGCA
CACCCCGCGTCCTtttgtcttccccctctccaaccccaccacctccgcgg
AATGCACGCCCTCGGAGGCCTACTTCCCGTGAATGTGCGACAAGGACGGC
CTCTTGGGCCAAGCGCGCCAGAACCGCTTGACCTCGCAACAGCTCGAATT
CATGCGTTCCGACCtccccgacggcctccccctcctggagGTGGCGAAAC
GTGTCCGCCCCACGATCCTTCTCGGTCTGAGCGCCCAGCGTGGCTTGTTC
AAGGAGGAACTGGTGAGGGAAATCGCGCGGCACACCCCGCGTCCTtttgt
cttccccctctccaaccccaccacctccgcggAATGCACGCCCTCGGAGG
CCTACTTCCCGTGA
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Synonyms
Publications