EWM23084.1, cds7589 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|585103936|gb|EWM23084.1| (nad-dependent malic [Nannochloropsis gaditana]) HSP 1 Score: 189.889 bits (481), Expect = 2.905e-61 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAYFP 93
MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAYFP
Sbjct: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAYFP 93
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|325190506|emb|CCA25004.1| (NADdependent malic enzyme putative [Albugo laibachii Nc14]) HSP 1 Score: 109.768 bits (273), Expect = 5.148e-26 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
+ DKDGL+G +R L S Q F R+ LPD + LLEV K V+PT+LLGLSA +G F +E+VRE+A+HT P +FPLSNPT+ AECT +AY
Sbjct: 413 IVDKDGLIGNSRST-LASGQKYFARAGLPDQISLLEVVKHVKPTMLLGLSAAKGAFTQEVVREMAQHTRNPIIFPLSNPTSVAECTAKQAY 502
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|635371552|emb|CCI40262.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 105.916 bits (263), Expect = 1.131e-24 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
+ DK GL+G +R N L S Q F +DLPD + LLEV K V+PT+LLGLSA +G F E+++RE+A+H P +FPLSNPT+ AECT +AY
Sbjct: 392 IVDKGGLIGGSR-NTLASGQKYFASADLPDRISLLEVIKHVKPTMLLGLSAAKGAFTEDVIREMAQHVRHPIIFPLSNPTSVAECTAKQAY 481
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|551657030|ref|XP_005831287.1| (hypothetical protein GUITHDRAFT_95097 [Guillardia theta CCMP2712] >gi|428175417|gb|EKX44307.1| hypothetical protein GUITHDRAFT_95097 [Guillardia theta CCMP2712]) HSP 1 Score: 105.531 bits (262), Expect = 1.146e-24 Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
+ DKDG L R +LT +Q F R D+ G+ LL+V K+ +PTIL+GLSA GLF EE+VRE+ H P+PF+FPLSNPT +AEC+ +AY
Sbjct: 282 VVDKDGPLTVDRLGKLTKEQSVFARDDMALGMTLLDVVKQFKPTILMGLSAVGGLFTEEIVREVKVHCPQPFIFPLSNPTANAECSAEDAY 372
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|673028026|ref|XP_008867974.1| (hypothetical protein H310_05114 [Aphanomyces invadans] >gi|574476747|gb|ETW03745.1| hypothetical protein H310_05114 [Aphanomyces invadans]) HSP 1 Score: 105.145 bits (261), Expect = 2.255e-24 Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0
Query: 3 DKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
D+ GLLG R++ + QQ F R+D+PD LL+V K+V+PT++LGLSA RG F EE VRE+A+H P VFPLSNPT+ AECT +AY
Sbjct: 383 DQFGLLGDTRRDMTSGQQF-FARNDVPDKTSLLDVIKKVKPTMILGLSAARGAFTEECVREMAKHVDMPIVFPLSNPTSVAECTAQQAY 470
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|698809662|ref|XP_009837860.1| (hypothetical protein H257_12382 [Aphanomyces astaci] >gi|574107118|gb|ETV72632.1| hypothetical protein H257_12382 [Aphanomyces astaci]) HSP 1 Score: 101.679 bits (252), Expect = 3.202e-23 Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 0
Query: 3 DKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
D+ GLLG++R + LTS Q F R DL D LL+V K+V+PT++LGLSA RG F EE +RE+A+H P VFPLSNPT+ AECT +AY
Sbjct: 382 DQFGLLGESRTD-LTSGQQFFARPDLTDKTSLLDVIKQVKPTMILGLSAARGAFTEECIREMAKHVEMPIVFPLSNPTSVAECTAQQAY 469
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|953486573|emb|CEG49476.1| (nad-dependent malic [Plasmopara halstedii]) HSP 1 Score: 101.679 bits (252), Expect = 3.680e-23 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
+ D+ GLLG++R++ L S Q F RSDL D L++V KRV+PT+L+GLSA G F +E V E+A+HT +P VFPLSNPT+ AECT +AY
Sbjct: 395 ILDQYGLLGESRES-LNSGQQYFSRSDLADKTNLVDVIKRVKPTMLMGLSAAAGAFTQEAVEEMAKHTKQPIVFPLSNPTSVAECTAEQAY 484
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|1173942785|gb|OQR91730.1| (NAD-dependent malic enzyme [Thraustotheca clavata]) HSP 1 Score: 100.138 bits (248), Expect = 1.511e-22 Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
+ D+ GL+ R N +TS Q F R+DLPD + L+++ K V+PT+LLGLSA RG F +E ++E+A+H +P VFPLSNPT AECT EAY
Sbjct: 403 VVDQFGLMTSERTN-MTSGQTFFARTDLPDKMSLVDLVKEVKPTMLLGLSAARGAFTKEALQEMAKHVAQPIVFPLSNPTAVAECTAQEAY 492
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|1069940926|ref|XP_018297973.1| (hypothetical protein PHYBLDRAFT_121547 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026595554|gb|OAD79933.1| hypothetical protein PHYBLDRAFT_121547 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 99.7525 bits (247), Expect = 1.590e-22 Identity = 44/91 (48.35%), Postives = 64/91 (70.33%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
M D+DGLLG R L +Q +++ D+ D L L +V ++V+PT++LGL+ RG+F E+ +R +A+HT +P VFPLSNP T AECT EA+
Sbjct: 374 MLDQDGLLGAVRDTPLDERQQSYVKHDMADRLTLEQVVEKVKPTVILGLTGIRGVFTEKAIRTMAQHTEKPVVFPLSNPDTHAECTAEEAF 464
BLAST of EWM23084.1 vs. NCBI_GenBank
Match: gi|1210516779|dbj|GAX24268.1| (malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [Fistulifera solaris]) HSP 1 Score: 98.9821 bits (245), Expect = 3.411e-22 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0
Query: 1 MCDKDGLLGQARQNRLTSQQLEFMRSDLPDGLPLLEVAKRVRPTILLGLSAQRGLFKEELVREIARHTPRPFVFPLSNPTTSAECTPSEAY 91
+CD GLLG+ R + L +Q EF R D GLPLL+V K+ +PTILLG++A GLF EL+ E++ + RP +FPLSNPT AECT +AY
Sbjct: 376 ICDHKGLLGKERCHELNPEQQEFAR-DEDSGLPLLDVVKKYKPTILLGVTAVGGLFTRELISEMSVNCERPIIFPLSNPTAKAECTAEQAY 465 The following BLAST results are available for this feature:
BLAST of EWM23084.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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