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Properties
| Property Name | Value |
|---|
| Product | short-chain dehydrogenase reductase sdr |
| Orig transcript id | gnl|cribi|Naga_100334g1.8498.mrna |
| Orig protein id | gnl|cribi|Naga_100334g1.8498 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:328297..330190 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7594 ID=rna7594|Name=rna7594|organism=Nannochloropsis gaditana|type=mRNA|length=2002bp
CTCGTACTACGCCCTTCATTGACCCCGCCTGTGCACGCACTGACCGCAAC
AGCTCCCACATATGCGAGAGTTCCATGGCCTCATGACATAGAGTGACACC
TCAGCTATCCTGGTTTCATTTCTTTACATCGGTCCTTCTCTCCTGGGCAG
GTTTTCTCTCCGCAGCCTGGGGGGCAAGTTGCGGCCGTTTTCCTTCATAT
TGAACCTTCCTCTCAATCCTGCATGCAAGCTCCATCCCTCAATCCTCCCT
CACCTGCGTCTACCTCCGTCTCTTCATCTACACCGCCGCCTCATTCGGAT
GCGAACGCCGGGACGCGGGGCGAGCAGGACACCGAGGCCCTCTTGCGTCG
GGCCCTCCCCCCTCATCGCGGTGCTCCTCCTCCCTCCCCCTTGCTCGTCC
GTACACTTTGCCAACAACTGGGAAGCATTCCCCCGGACCTTCGCCGAGAT
ATCTGGCCCCTTCTTCTTCTCGGTCCCGATGCCTACGATGCAGACGTTGC
CACGGCCCCGAGTGCCATCGTCCAAGGCTTCTCCGGCAAGGAGGAAGGAG
CAACTGCGGGGGCGAAGGTCGGGCCCCATTGTGGGAACAAGAGCAGCCCT
GTTGACGGCCCATCGAGGGGCTTGGAGGCGCTCTGCGGCGACGATGCGAA
GCCGTTTTCCCTCGCCCAGGCCATTGAAGACGTGCCCCTGGACCTCCCCA
ATCAACGCGTTGTCGAGATCGACGCCCTCCGCACACGGTCCGAGCTACCT
CTGTTCAAATCGCCCGGCACCCAAGCCATGATCGAACGGGTCTTGACCCT
GTACTGCAAACTGCAGGGAATCTCGTACAAGCAGGGGCTGAACGAGGTCC
TGGCTCCTTTTGTCCAGGTGGTGATGGGGAGGGAGGGCGGATGTGATGGG
GAGGGGCGAAGGCCCGACCGACTAGGAGAAGGAAGGAAAGGCGAGGGTGT
CGGGGAAGAAGCGGGGGGTGCGTTGCAGGAGGATGGGGAGGGAGACGGGG
GGGACAGACGTGGGCAAGGATGCCCTCCCTCGGCCGCCCCCTCCCTCCTC
ATCTACCGTTGCTTCGCACGCTTCCTCCACCTCTTGCTGGGGAACTTGTA
CTCGGACGAGGATTTCCACCTCCTGCAAGCCCTCTTCCTCCTCTTCCGTC
TCCTCCTCCTCTACCACTGCCCCCGCCTCTCCTTGCGCCTTGATGCCTGC
GGCCTCCCCCCCGAACTCTACCTGACACCCTGGGTGCTCACCCTCCTGGC
CCGAAGCCTTGACATGCCCACCACGCTCGCCCTCTGGGACCACTACCTGC
TCGAACAGGACCCGCTCCTCCATCACTTCCTCCTCCTCGCCCTCCTCCGT
CGGCACCGAGCCTCCCTGCTCGCCGCCCCCGTGGACCTCCTCCCCGAGAC
CCTTGCCTCCCTCTCCTTCTCCGGCACGGCCCATGTGGCCTCCCTTGTCG
CCGAAGCCAAAGCCCTGCGGGCGCAAACGCCGGACAGTTACTGCCGGCGG
CTGGCCCGGGTCTCTCGGACCAACGTGGATGCCGCTTCCCTCTCGGCCCT
TCTTTTGGATTTGAACGCGGTCCCGACCGTTACGCTAACGGCCCAGGAGG
CGTTGGAAGGGGTCTTGGATGTGCTGGGGTACGGGGAGGAGGAGGAGGAG
GGAGGGGAGGAAGAGGAGGAAGAGGAGAGGACAAAGGTGGAGGAGAATAG
GGAGGAGGAGGGAGGGGAAAGGAAGGTACCGCCTGCCAAGCCTCCAAGGA
GGTCGCGGGAAGAGGAAGGAGAGAGGGGGGATGGCGGGGGAAGAGGAGAA
GGGAGGGCGGCCAGAGGGGAGGGAGGGGAATGTGGGCGGGGGCTGCATGA
CGAAATCGAAGGAGAGCGCGGAGCGGACAGGGCGGAGGAGGGAGGCAGCA
GGCGCCAGGAAAGGGAGGAGGTGGGGCAGCACCCGGATGGGGAGGGAAGG
AGGAGGAGGAGTGAGGAGGAGGAGGAGGGGGAGGGGAGGGAGGGGGAGGG
AG back to topprotein sequence of rna7594 >rna7594-protein ID=rna7594-protein|Name=rna7594|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRK
DTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSST
GIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDG
GVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVME
VNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALE
AISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVL
YQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGL
SLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK back to topmRNA from alignment at CM002472.1:328297..330190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7594 ID=rna7594|Name=rna7594|organism=Nannochloropsis gaditana|type=mRNA|length=1894bp|location=Sequence derived from alignment at CM002472.1:328297..330190- (Nannochloropsis gaditana)
ATGTTGCTGGTGTCAGCACGAATGCAACGACAGTCGAGGAAGCTGTCGTC
TGGAATGGTGTTCGGGTTCCTTGTGCGCATTGCTTACATGGAGGAATCTA
GGGGTGACGCCCCGGCAAAGTTTGTCGGGCGGTAGCATCCAACTCGAAGT
ATACATGGAAAGAAATTATCGAAAATTTTGTGGATTGTGAGATGAAGCAG
TCTTCTTTTCCTAGAGACTCTTCTCCCCCAGGCACCCATAAACGCGCAGG
GAAATACTCTGTATGAGTTAGTTAGTTGAGATTAACCTCCCGGCTTGGGA
GCAGCTACCTGTGAGCTGACAATTAAGGTCTGTAGCTGTCTCGTGTTCCA
CGTGCATGTACTAGCTATGTTTTGAAAATGATGTTAAGTATGCTGCTTGC
ATTGGTTTTGCTGGAGGTAACTGGGAGGAATGAGACATTAATCGACCCGC
AAGTCAGAGAAGCATAACACGAGCGGGCCCTGCTTTGTTCGCTTTAGATC
GAAGGTGTATGGGCAAAATGGCACGTATTGTATTTCAAAAAAGTACGCAG
TGGAAGGTGATATTGTGTAACGACTTTAACTTTCTAATTAGACCCAACAT
GCTAGGAATCTTGGACGCGCGCTTTACAACCTCGACCACATGGTTTCCCC
ACATAAAACATGTTCCAAAATCCTTCATCGTTTCATTCTTATGAATCTCC
TCATTCTAATTCTTCTACTTTCCCGTGCATCTTTCACTTTGTAGCGGAAT
GGCTTCTCGTAAGGACACCGCCCACCGCAGTGTTAGCTCACTCCTCTTGG
CAAGTGCACCCCTGCTCGTCGCTCTTTTTCTAGGTCTTATCCACAGCATG
ACCAAACCATCCTTCCCCGTCCCTCCTTCCGGGTCTGCAGTGGTGATCAC
TGGGAGCAGCACAGGCATTGGTCGGCATTCCGCCGCAGGGTTGGCGGCAG
CAGGCTTCCTAGTCTTTGCCGGCGTCCGGCGAGTACGGGACGTGGAGACC
CTCGTCGAGGCCTACCCCGGTCGCGTCTTTCCTTTGCTTTTGGACGTGAC
AGATCATGACGGAGGGGTGATGCGGGCGGCAGAGGAGGTCAGGGAGACCT
TGGAGGACATGGGGGGCAAGGTCAAGCTGGCTGGACTCGTGAATAATGCG
GGGATCGGTGAGTTCGGGCGCGAGTTTGACGTCATGAAGTCTGCCATACT
CACGCGTTCGAGTTGGACGGACTACAAGCAACTTTGACCACTCTGCGATG
CCTCATTTTCGTTCCTACTTGCCTCAGGCTTGGCCATGCCCTTGGAACTT
TTACCTCTCTCTCGCCTTCGCCAGGTCATGGAGGTCAACGTGGTCGGCCT
CTTGGGCGTGACACAGGCCTTCCTTCCTCAGCTCCGTCGGGACCAGGGAC
GGATCATCAACGTGGGCAGTGCTGCAGGATTTACCGTCCCAGTCACGTAC
GGTGCCTACTCGAGCAGCAAGTACGCCTTGGAAGCGATTTCAGACGCCCT
CCGTCTCGAGTTACGGCCGTGGAGAATCTCCGTGTCGCTCCTCGAACCGG
GAACGATTGAGAGTGAGATACGACGAAAAAATGTCGGGGACGCCGCGCCT
TTCAAAAACTTGACCGAATCTCAGTACGTTTTATACCAGCAAATATTCGA
CACGTATGAGCAGCGCGTGGATGCCCTTGAGCGCGCCGCTGGCTCTCCAC
AATTGACAACAGACGCCATTTTGCATGCTTTGACGAGTTCTACACCTCAA
AGCCGTTACGTACTGGGAGCGTATCAGGGTCTGAGTTTATGGCTGCTTCG
GCATGTCGTATTGCCGTTCGTTCCTGACTATCTTTTGGACTGGGGAAAGA
TGAAAATGATTGACCTGGCGGTTAGACAAGAAATGAAGAAATGA back to topCoding sequence (CDS) from alignment at CM002472.1:328297..330190- >rna7594 ID=rna7594|Name=rna7594|organism=Nannochloropsis gaditana|type=CDS|length=3483bp|location=Sequence derived from alignment at CM002472.1:328297..330190- (Nannochloropsis gaditana)
GCTTGGCCATGCCCTTGGAACTTTTACCTCTCTCTCGCCTTCGCCAGGTC
ATGGAGGTCAACGTGGTCGGCCTCTTGGGCGTGACACAGGCCTTCCTTCC
TCAGCTCCGTCGGGACCAGGGACGGATCATCAACGTGGGCAGTGCTGCAG
GATTTACCGTCCCAGTCACGTACGGTGCCTACTCGAGCAGCAAGTACGCC
TTGGAAGCGATTTCAGACGCCCTCCGTCTCGAGTTACGGCCGTGGAGAAT
CTCCGTGTCGCTCCTCGAACCGGGAACGATTGAGAGTGAGATACGACGAA
AAAATGTCGGGGACGCCGCGCCTTTCAAAAACTTGACCGAATCTCAGTAC
GTTTTATACCAGCAAATATTCGACACGTATGAGCAGCGCGTGGATGCCCT
TGAGCGCGCCGCTGGCTCTCCACAATTGACAACAGACGCCATTTTGCATG
CTTTGACGAGTTCTACACCTCAAAGCCGTTACGTACTGGGAGCGTATCAG
GGTCTGAGTTTATGGCTGCTTCGGCATGTCGTATTGCCGTTCGTTCCTGA
CTATCTTTTGGACTGGGGAAAGATGAAAATGATTGACCTGGCGGTTAGAC
AAGAAATGAAGAAATGACGGAATGGCTTCTCGTAAGGACACCGCCCACCG
CAGTGTTAGCTCACTCCTCTTGGCAAGTGCACCCCTGCTCGTCGCTCTTT
TTCTAGGTCTTATCCACAGCATGACCAAACCATCCTTCCCCGTCCCTCCT
TCCGGGTCTGCAGTGGTGATCACTGGGAGCAGCACAGGCATTGGTCGGCA
TTCCGCCGCAGGGTTGGCGGCAGCAGGCTTCCTAGTCTTTGCCGGCGTCC
GGCGAGTACGGGACGTGGAGACCCTCGTCGAGGCCTACCCCGGTCGCGTC
TTTCCTTTGCTTTTGGACGTGACAGATCATGACGGAGGGGTGATGCGGGC
GGCAGAGGAGGTCAGGGAGACCTTGGAGGACATGGGGGGCAAGGTCAAGC
TGGCTGGACTCGTGAATAATGCGGGGATCGATGTTGCTGGTGTCAGCACG
AATGCAACGACAGTCGAGGAAGCTGTCGTCTGGAATGGTGTTCGGGTTCC
TTGTGCGCATTGCTTACATGGAGGAATCTAGGGGTGACGCCCCGGCAAAG
TTTGTCGGGCGGCTTGGCCATGCCCTTGGAACTTTTACCTCTCTCTCGCC
TTCGCCAGGTCATGGAGGTCAACGTGGTCGGCCTCTTGGGCGTGACACAG
GCCTTCCTTCCTCAGCTCCGTCGGGACCAGGGACGGATCATCAACGTGGG
CAGTGCTGCAGGATTTACCGTCCCAGTCACGTACGGTGCCTACTCGAGCA
GCAAGTACGCCTTGGAAGCGATTTCAGACGCCCTCCGTCTCGAGTTACGG
CCGTGGAGAATCTCCGTGTCGCTCCTCGAACCGGGAACGATTGAGAGTGA
GATACGACGAAAAAATGTCGGGGACGCCGCGCCTTTCAAAAACTTGACCG
AATCTCAGTACGTTTTATACCAGCAAATATTCGACACGTATGAGCAGCGC
GTGGATGCCCTTGAGCGCGCCGCTGGCTCTCCACAATTGACAACAGACGC
CATTTTGCATGCTTTGACGAGTTCTACACCTCAAAGCCGTTACGTACTGG
GAGCGTATCAGGGTCTGAGTTTATGGCTGCTTCGGCATGTCGTATTGCCG
TTCGTTCCTGACTATCTTTTGGACTGGGGAAAGATGAAAATGATTGACCT
GGCGGTTAGACAAGAAATGAAGAAATGACGGAATGGCTTCTCGTAAGGAC
ACCGCCCACCGCAGTGTTAGCTCACTCCTCTTGGCAAGTGCACCCCTGCT
CGTCGCTCTTTTTCTAGGTCTTATCCACAGCATGACCAAACCATCCTTCC
CCGTCCCTCCTTCCGGGTCTGCAGTGGTGATCACTGGGAGCAGCACAGGC
ATTGGTCGGCATTCCGCCGCAGGGTTGGCGGCAGCAGGCTTCCTAGTCTT
TGCCGGCGTCCGGCGAGTACGGGACGTGGAGACCCTCGTCGAGGCCTACC
CCGGTCGCGTCTTTCCTTTGCTTTTGGACGTGACAGATCATGACGGAGGG
GTGATGCGGGCGGCAGAGGAGGTCAGGGAGACCTTGGAGGACATGGGGGG
CAAGGTCAAGCTGGCTGGACTCGTGAATAATGCGGGGATCGATGTTGCTG
GTGTCAGCACGAATGCAACGACAGTCGAGGAAGCTGTCGTCTGGAATGGT
GTTCGGGTTCCTTGTGCGCATTGCTTACATGGAGGAATCTAGGGGTGACG
CCCCGGCAAAGTTTGTCGGGCGGCTTGGCCATGCCCTTGGAACTTTTACC
TCTCTCTCGCCTTCGCCAGGTCATGGAGGTCAACGTGGTCGGCCTCTTGG
GCGTGACACAGGCCTTCCTTCCTCAGCTCCGTCGGGACCAGGGACGGATC
ATCAACGTGGGCAGTGCTGCAGGATTTACCGTCCCAGTCACGTACGGTGC
CTACTCGAGCAGCAAGTACGCCTTGGAAGCGATTTCAGACGCCCTCCGTC
TCGAGTTACGGCCGTGGAGAATCTCCGTGTCGCTCCTCGAACCGGGAACG
ATTGAGAGTGAGATACGACGAAAAAATGTCGGGGACGCCGCGCCTTTCAA
AAACTTGACCGAATCTCAGTACGTTTTATACCAGCAAATATTCGACACGT
ATGAGCAGCGCGTGGATGCCCTTGAGCGCGCCGCTGGCTCTCCACAATTG
ACAACAGACGCCATTTTGCATGCTTTGACGAGTTCTACACCTCAAAGCCG
TTACGTACTGGGAGCGTATCAGGGTCTGAGTTTATGGCTGCTTCGGCATG
TCGTATTGCCGTTCGTTCCTGACTATCTTTTGGACTGGGGAAAGATGAAA
ATGATTGACCTGGCGGTTAGACAAGAAATGAAGAAATGACGGAATGGCTT
CTCGTAAGGACACCGCCCACCGCAGTGTTAGCTCACTCCTCTTGGCAAGT
GCACCCCTGCTCGTCGCTCTTTTTCTAGGTCTTATCCACAGCATGACCAA
ACCATCCTTCCCCGTCCCTCCTTCCGGGTCTGCAGTGGTGATCACTGGGA
GCAGCACAGGCATTGGTCGGCATTCCGCCGCAGGGTTGGCGGCAGCAGGC
TTCCTAGTCTTTGCCGGCGTCCGGCGAGTACGGGACGTGGAGACCCTCGT
CGAGGCCTACCCCGGTCGCGTCTTTCCTTTGCTTTTGGACGTGACAGATC
ATGACGGAGGGGTGATGCGGGCGGCAGAGGAGGTCAGGGAGACCTTGGAG
GACATGGGGGGCAAGGTCAAGCTGGCTGGACTCGTGAATAATGCGGGGAT
CGATGTTGCTGGTGTCAGCACGAATGCAACGACAGTCGAGGAAGCTGTCG
TCTGGAATGGTGTTCGGGTTCCTTGTGCGCATTGCTTACATGGAGGAATC
TAGGGGTGACGCCCCGGCAAAGTTTGTCGGGCG back to top
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