EWM23099.1, cds7574 (CDS) Nannochloropsis gaditana

Overview
NameEWM23099.1
Unique Namecds7574
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:330060..330190 -
Alignment locationCM002472.1:329034..329446 -
Alignment locationCM002472.1:328297..328913 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23099.1
Productshort-chain dehydrogenase reductase sdr
Orig transcript idgnl|cribi|Naga_100334g1.8498.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:330060..330190 -
CM002472.1supercontigCM002472.1:329034..329446 -
CM002472.1supercontigCM002472.1:328297..328913 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
IPR013968PKS_KR
IPR002198DH_sc/Rdtase_SDR
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|585103961|gb|EWM23099.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0
Query:    1 MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 386
            MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK
Sbjct:    1 MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 386          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|553194368|ref|XP_005855938.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293111|gb|EKU20411.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query:   46 MASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 386
            MASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK
Sbjct:    1 MASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 341          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|585103254|gb|EWM22688.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 221.09 bits (562), Expect = 7.354e-66
Identity = 128/312 (41.03%), Postives = 194/312 (62.18%), Query Frame = 0
Query:   68 LVALFLGLIHSMTKPSFPVPPSGSA--VVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQG-RIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAP-FKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKM 375
            ++A   G  H + + ++P PP G+   +VI+G+STGIGRH+A  LA  GF V AGVRR  D+E L  A+   + P++LDVT+     +RAA E  E L  +     + GLVNNAG+G  +P+EL  + + R++ EVNV+ ++G+ QAF+P LRR  G RI+NVGSA G       G Y+SSK+A+E ++D++RLEL  W +SVSL+ PG ++S +  K  G  AP   +L+  QY LY+ +F   E+ V           +T+ AI HAL S  P++RY++ +  G+ LWLLR +    +PD ++D+ K+++
Sbjct:   12 IIATLWGASHLVLRRAYPAPPPGNQAIIVISGASTGIGRHAAEYLARLGFTVLAGVRREADMEDLRSAHLPSLHPIILDVTNASD--VRAAVERAEALAPL----PVWGLVNNAGLGYPIPVELADMEKARKLFEVNVLAVIGMAQAFVPLLRRAPGGRIVNVGSATGTMATQGDGIYASSKHAVEGLTDSMRLELAAWEMSVSLVVPGQVQSGMWGKLTGQNAPAINDLSADQYALYKPLFLQVEKAVSGFIPKLSPASVTSQAIAHALMSPQPKTRYLVASVNGVPLWLLRGLC-GLLPDRVVDFVKLRL 316          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1121324373|ref|WP_073634325.1| (oxidoreductase [Scytonema sp. HK-05] >gi|1115292315|gb|OKH55357.1| short-chain dehydrogenase/reductase [Scytonema sp. HK-05] >gi|1210123665|dbj|BAY42779.1| short-chain dehydrogenase/reductase SDR [Scytonema sp. HK-05])

HSP 1 Score: 211.46 bits (537), Expect = 2.054e-62
Identity = 126/280 (45.00%), Postives = 171/280 (61.07%), Query Frame = 0
Query:   92 AVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAG-FTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKN-LTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
            AVVITG+S+GIG   A  L   G+ VFAGVRR  D E L      R+ PLLLDV D +  +M AA  V   L  +G    LAGLVNNAGI +A PLE LP++ LR+ +EVNV+G + VTQAFLP LR+ QGR+IN+GS  G  +VP   G Y +SK+A+EA++DALR+EL+PW I VS++EPGT+ + I  K+   A    N L    + LY    D      + L +     ++   A+  ALT+  P++RYV+G    +++WL +      +PD LLD
Sbjct:    9 AVVITGASSGIGEACAIYLDKLGYQVFAGVRRDADGEQLRRKTSVRLTPLLLDVRD-EASIMAAANTVSAALNTVG----LAGLVNNAGIVVAGPLEFLPVAELRKQLEVNVIGQIAVTQAFLPLLRKAQGRVINIGSDNGKVSVPF-LGPYCASKFAMEALTDALRMELQPWGIEVSIIEPGTVTTPIWEKSSDLADDIWNKLPPQAHKLYSAAVDATRNTANKLSKNGFPAEVVAFAVAQALTAKKPKTRYVVGLDAQINIWLAK-----ILPDRLLD 277          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1210211457|dbj|BAZ30497.1| (short-chain dehydrogenase/reductase SDR [Cylindrospermum sp. NIES-4074])

HSP 1 Score: 210.69 bits (535), Expect = 3.185e-62
Identity = 120/292 (41.10%), Postives = 178/292 (60.96%), Query Frame = 0
Query:   79 MTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAP-FKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
            ++K SF    +GS VVI+G+S+GIG   A  L   G+ VFAGVR   D E L      R+ P+ LDVT+ +  ++ AA  ++ TL+  G    L GLVNNAGI +A PLE LP++ LR+  E+NV+G + VTQAFLP LR  QGRIIN+ S  G       G+Y +SK+ALEA++DALR+EL+PW I+V ++EPG++ + I +K++  A   + NL      LY    D+  ++ + L       ++   A+ HALT+  P+ RYV+G    +++WL +      +PD++LD
Sbjct:    2 VSKKSF----TGS-VVISGASSGIGEACAIYLDKLGYQVFAGVRSDADGEALKCKTSERLTPIFLDVTN-EVSIIAAANRIKATLDSTG----LTGLVNNAGIVIAGPLEFLPVADLREQFEINVIGQIAVTQAFLPLLRESQGRIINMSSDNGKVSIPFLGSYCASKFALEALTDALRIELQPWGIAVCIIEPGSVTTPIWKKSISKADNIWNNLPPEARSLYSVFVDSAHKKANELSNNGFPAEVVAKAVAHALTTKRPKIRYVVGLDAKINIWLAK-----ILPDWILD 278          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|514686056|ref|XP_004990606.1| (oxidoreductase [Salpingoeca rosetta] >gi|326431692|gb|EGD77262.1| oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 211.46 bits (537), Expect = 4.438e-62
Identity = 117/283 (41.34%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   68 LVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGL 350
            ++A+ L L+       FPV  SG A++ITG+STGIGRH+A  LA  G+ V+A VR+  DV++L +     + P+++DVT  D  +  A + +++      G  KL GLVNNAGI   +PLE   L R+R + EVNV G++ VTQAFLP +R ++GRI+NVGS AGF       +YS++K+ LE ++DALR E+ P+ +SVS++EP  + + I  K+ G+AA  + ++      Y   F  +E++    E  A  P++TT AI HALTS TP++RY++    G+
Sbjct:   12 ILAVLLYLLFVFPVKYFPVHDSG-AILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQ-IASAVDTIKK------GGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFADFEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGI 286          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1210107070|dbj|BAY26200.1| (short-chain dehydrogenase/reductase SDR [Calothrix sp. NIES-2100])

HSP 1 Score: 209.149 bits (531), Expect = 1.295e-61
Identity = 126/278 (45.32%), Postives = 171/278 (61.51%), Query Frame = 0
Query:   93 VVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFK-NLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
            VVITG+STGIG   A  L   GF VFAGVR+    + L E    R+ P+ LDVTD D  +  A E V           KLAGLVNNAGI +  PLELLP++  +  ++VN+ G L VTQAFL  LR+ QGRI+N+GS AG +     GAY++SK+ALEAI+D +RLELRPW ISVS++EPGTI + I  K++  A   K NL+ES   LY Q  +   ++V  L     S  +   A++HALT+  P++RY++G    ++  +L+H     +PD + D
Sbjct:    9 VVITGASTGIGEACALLLDQLGFSVFAGVRQEVHAQKLKEKASPRLTPIFLDVTDADA-IAFAVETVTN-----ASNGKLAGLVNNAGIAIPGPLELLPIADFQHQIQVNLTGQLAVTQAFLGLLRQGQGRIVNMGSIAGRSAAPFLGAYNASKFALEAITDVMRLELRPWGISVSIIEPGTIATPIWDKSLTQADIDKENLSESAQNLYGQAMNAVRKQVGILASKGISADIVAQAVVHALTAKHPKTRYLVGQDAKIAA-MLKH----LLPDRVYD 275          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|797207237|ref|WP_045868189.1| (short-chain dehydrogenase/reductase [Tolypothrix sp. PCC 7601] >gi|407273665|gb|EKF05099.1| oxidoreductase, short chain dehydrogenase/reductase family protein [Tolypothrix sp. PCC 7601] >gi|1210172688|dbj|BAY91763.1| short-chain dehydrogenase/reductase SDR [Fremyella diplosiphon NIES-3275])

HSP 1 Score: 206.453 bits (524), Expect = 1.210e-60
Identity = 121/254 (47.64%), Postives = 157/254 (61.81%), Query Frame = 0
Query:   93 VVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFK-NLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLG 345
            VVITG+STGIG  SA  L   GF VFAGVRR  D E L      R+ P+ LDVTD+D  +  A E V +         KLAGLVNNAGI +  PLELLP+S     M VNV G L VTQAFL  LR+ QGRI+N+GS  G +     GAY++SK+ALEAI++ +RLELRPW ISVS++ PGTI + I  K++  A   + NL E    LY Q  +T  ++V  +     +  L   A++HALT+  P++ Y++G
Sbjct:    9 VVITGASTGIGEASALLLDKLGFNVFAGVRREIDAEKLKRKASSRLTPIFLDVTDNDA-IALAVETVSKASNG-----KLAGLVNNAGIAIPGPLELLPISEFEHQMRVNVTGQLAVTQAFLGLLRQGQGRIVNMGSICGKSAAPFLGAYNASKFALEAITEVMRLELRPWGISVSIIRPGTIATPIWDKSLTQADIDRDNLPEFAQNLYGQAMNTVRKQVGIMASKGIAADLVAQAVVHALTAKQPKTSYLVG 256          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1210230844|dbj|BAZ49865.1| (short-chain dehydrogenase/reductase SDR [Nostoc sp. NIES-4103])

HSP 1 Score: 205.682 bits (522), Expect = 2.971e-60
Identity = 122/279 (43.73%), Postives = 163/279 (58.42%), Query Frame = 0
Query:   92 AVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAP-FKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
            AVVITG+S+GIG  SA  L   G+ VFAGVRR  D E L      R+ P+LLDV D +  +  AA  +  TL D+G    LAGLVNNAGI +A PLE LP+  LR+ +EVNV+G + VTQAFLP LR+ QGR+IN+ S  G  V    G Y +SK+ALEA++DALR+EL+PW I V ++EPGT+ + I  K++  A    K +      LY    D        L +           I  AL++  P++RYV+G    +S+WL +      + D LLD
Sbjct:    9 AVVITGASSGIGEASAIYLDNLGYQVFAGVRRDVDGEELKSKTSARLTPILLDVND-EASIKAAANTISATLNDVG----LAGLVNNAGIAVAGPLEFLPIDELRKQLEVNVIGQIAVTQAFLPLLRKAQGRVINISSDNGKVVVPFLGPYCASKFALEALTDALRIELQPWGIEVVIIEPGTVTTPIWNKSITLADDILKKMPPQALELYSLAVDATRNTAKKLSQNGFPASEVGKTIAKALSAKKPKTRYVVGLDAQMSIWLSK-----ILSDRLLD 277          
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1121221119|ref|WP_073548559.1| (oxidoreductase [Chroogloeocystis siderophila] >gi|1115264433|gb|OKH28104.1| short-chain dehydrogenase/reductase [Chroogloeocystis siderophila 5.2 s.c.1])

HSP 1 Score: 205.297 bits (521), Expect = 3.349e-60
Identity = 121/288 (42.01%), Postives = 172/288 (59.72%), Query Frame = 0
Query:   92 AVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPF-KNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDL 378
            AVV+TG+STGIG   A  L   GF VFAGVRR  D + L      ++ P+ LDVTD D  +  A  +V   + + G    L GLVNNAGI +  PLE +P++  R+ +EVNV G L VTQAFLP LR  +GRI+N+GS  G +     GAYS+SK+ALEA++DALRLELRPW I V+++EPG I + I +K++  A    ++L +  + LY Q   T  +    L +   SP     A++ ALT+  P++RY++G    +        +L F+PD ++D    K ++L
Sbjct:    8 AVVVTGASTGIGAACALRLDHLGFQVFAGVRRKEDAQALQAKASPQLMPIFLDVTDLDS-ITAAMHKVAIAVGNSG----LIGLVNNAGIAVGAPLEFIPITEFRKQLEVNVTGQLAVTQAFLPLLRLAKGRIVNMGSITGRSATPFLGAYSASKFALEALTDALRLELRPWGIWVAIIEPGAISTPIWQKSLSQADTLQQSLPQPAHELYGQAMKTASKGAATLAQKGISPDKVAQAVVRALTAKRPKTRYLVGQDARI------RAMLSFLPDRIVDELTAKAMNL 284          
The following BLAST results are available for this feature:
BLAST of EWM23099.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103961|gb|EWM23099.1|0.000e+0100.00short-chain dehydrogenase reductase sdr [Nannochlo... [more]
gi|553194368|ref|XP_005855938.1|0.000e+0100.00short-chain dehydrogenase reductase sdr [Nannochlo... [more]
gi|585103254|gb|EWM22688.1|7.354e-6641.03short-chain dehydrogenase reductase sdr [Nannochlo... [more]
gi|1121324373|ref|WP_073634325.1|2.054e-6245.00oxidoreductase [Scytonema sp. HK-05] >gi|111529231... [more]
gi|1210211457|dbj|BAZ30497.1|3.185e-6241.10short-chain dehydrogenase/reductase SDR [Cylindros... [more]
gi|514686056|ref|XP_004990606.1|4.438e-6241.34oxidoreductase [Salpingoeca rosetta] >gi|326431692... [more]
gi|1210107070|dbj|BAY26200.1|1.295e-6145.32short-chain dehydrogenase/reductase SDR [Calothrix... [more]
gi|797207237|ref|WP_045868189.1|1.210e-6047.64short-chain dehydrogenase/reductase [Tolypothrix s... [more]
gi|1210230844|dbj|BAZ49865.1|2.971e-6043.73short-chain dehydrogenase/reductase SDR [Nostoc sp... [more]
gi|1121221119|ref|WP_073548559.1|3.349e-6042.01oxidoreductase [Chroogloeocystis siderophila] >gi|... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7594rna7594Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications