EWM23099.1, cds7574 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|585103961|gb|EWM23099.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0 Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0
Query: 1 MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 386
MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK
Sbjct: 1 MLLVSARMQRQSRKLSSGMVFGFLVRIAYMEESRGDAPAKFVGRGMASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 386
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|553194368|ref|XP_005855938.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293111|gb|EKU20411.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query: 46 MASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 386
MASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK
Sbjct: 1 MASRKDTAHRSVSSLLLASAPLLVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDLAVRQEMKK 341
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|585103254|gb|EWM22688.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 221.09 bits (562), Expect = 7.354e-66 Identity = 128/312 (41.03%), Postives = 194/312 (62.18%), Query Frame = 0
Query: 68 LVALFLGLIHSMTKPSFPVPPSGSA--VVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQG-RIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAP-FKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKM 375
++A G H + + ++P PP G+ +VI+G+STGIGRH+A LA GF V AGVRR D+E L A+ + P++LDVT+ +RAA E E L + + GLVNNAG+G +P+EL + + R++ EVNV+ ++G+ QAF+P LRR G RI+NVGSA G G Y+SSK+A+E ++D++RLEL W +SVSL+ PG ++S + K G AP +L+ QY LY+ +F E+ V +T+ AI HAL S P++RY++ + G+ LWLLR + +PD ++D+ K+++
Sbjct: 12 IIATLWGASHLVLRRAYPAPPPGNQAIIVISGASTGIGRHAAEYLARLGFTVLAGVRREADMEDLRSAHLPSLHPIILDVTNASD--VRAAVERAEALAPL----PVWGLVNNAGLGYPIPVELADMEKARKLFEVNVLAVIGMAQAFVPLLRRAPGGRIVNVGSATGTMATQGDGIYASSKHAVEGLTDSMRLELAAWEMSVSLVVPGQVQSGMWGKLTGQNAPAINDLSADQYALYKPLFLQVEKAVSGFIPKLSPASVTSQAIAHALMSPQPKTRYLVASVNGVPLWLLRGLC-GLLPDRVVDFVKLRL 316
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1121324373|ref|WP_073634325.1| (oxidoreductase [Scytonema sp. HK-05] >gi|1115292315|gb|OKH55357.1| short-chain dehydrogenase/reductase [Scytonema sp. HK-05] >gi|1210123665|dbj|BAY42779.1| short-chain dehydrogenase/reductase SDR [Scytonema sp. HK-05]) HSP 1 Score: 211.46 bits (537), Expect = 2.054e-62 Identity = 126/280 (45.00%), Postives = 171/280 (61.07%), Query Frame = 0
Query: 92 AVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAG-FTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKN-LTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
AVVITG+S+GIG A L G+ VFAGVRR D E L R+ PLLLDV D + +M AA V L +G LAGLVNNAGI +A PLE LP++ LR+ +EVNV+G + VTQAFLP LR+ QGR+IN+GS G +VP G Y +SK+A+EA++DALR+EL+PW I VS++EPGT+ + I K+ A N L + LY D + L + ++ A+ ALT+ P++RYV+G +++WL + +PD LLD
Sbjct: 9 AVVITGASSGIGEACAIYLDKLGYQVFAGVRRDADGEQLRRKTSVRLTPLLLDVRD-EASIMAAANTVSAALNTVG----LAGLVNNAGIVVAGPLEFLPVAELRKQLEVNVIGQIAVTQAFLPLLRKAQGRVINIGSDNGKVSVPF-LGPYCASKFAMEALTDALRMELQPWGIEVSIIEPGTVTTPIWEKSSDLADDIWNKLPPQAHKLYSAAVDATRNTANKLSKNGFPAEVVAFAVAQALTAKKPKTRYVVGLDAQINIWLAK-----ILPDRLLD 277
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1210211457|dbj|BAZ30497.1| (short-chain dehydrogenase/reductase SDR [Cylindrospermum sp. NIES-4074]) HSP 1 Score: 210.69 bits (535), Expect = 3.185e-62 Identity = 120/292 (41.10%), Postives = 178/292 (60.96%), Query Frame = 0
Query: 79 MTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAP-FKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
++K SF +GS VVI+G+S+GIG A L G+ VFAGVR D E L R+ P+ LDVT+ + ++ AA ++ TL+ G L GLVNNAGI +A PLE LP++ LR+ E+NV+G + VTQAFLP LR QGRIIN+ S G G+Y +SK+ALEA++DALR+EL+PW I+V ++EPG++ + I +K++ A + NL LY D+ ++ + L ++ A+ HALT+ P+ RYV+G +++WL + +PD++LD
Sbjct: 2 VSKKSF----TGS-VVISGASSGIGEACAIYLDKLGYQVFAGVRSDADGEALKCKTSERLTPIFLDVTN-EVSIIAAANRIKATLDSTG----LTGLVNNAGIVIAGPLEFLPVADLREQFEINVIGQIAVTQAFLPLLRESQGRIINMSSDNGKVSIPFLGSYCASKFALEALTDALRIELQPWGIAVCIIEPGSVTTPIWKKSISKADNIWNNLPPEARSLYSVFVDSAHKKANELSNNGFPAEVVAKAVAHALTTKRPKIRYVVGLDAKINIWLAK-----ILPDWILD 278
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|514686056|ref|XP_004990606.1| (oxidoreductase [Salpingoeca rosetta] >gi|326431692|gb|EGD77262.1| oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 211.46 bits (537), Expect = 4.438e-62 Identity = 117/283 (41.34%), Postives = 177/283 (62.54%), Query Frame = 0
Query: 68 LVALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGL 350
++A+ L L+ FPV SG A++ITG+STGIGRH+A LA G+ V+A VR+ DV++L + + P+++DVT D + A + +++ G KL GLVNNAGI +PLE L R+R + EVNV G++ VTQAFLP +R ++GRI+NVGS AGF +YS++K+ LE ++DALR E+ P+ +SVS++EP + + I K+ G+AA + ++ Y F +E++ E A P++TT AI HALTS TP++RY++ G+
Sbjct: 12 ILAVLLYLLFVFPVKYFPVHDSG-AILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQ-IASAVDTIKK------GGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFADFEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGI 286
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1210107070|dbj|BAY26200.1| (short-chain dehydrogenase/reductase SDR [Calothrix sp. NIES-2100]) HSP 1 Score: 209.149 bits (531), Expect = 1.295e-61 Identity = 126/278 (45.32%), Postives = 171/278 (61.51%), Query Frame = 0
Query: 93 VVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFK-NLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
VVITG+STGIG A L GF VFAGVR+ + L E R+ P+ LDVTD D + A E V KLAGLVNNAGI + PLELLP++ + ++VN+ G L VTQAFL LR+ QGRI+N+GS AG + GAY++SK+ALEAI+D +RLELRPW ISVS++EPGTI + I K++ A K NL+ES LY Q + ++V L S + A++HALT+ P++RY++G ++ +L+H +PD + D
Sbjct: 9 VVITGASTGIGEACALLLDQLGFSVFAGVRQEVHAQKLKEKASPRLTPIFLDVTDADA-IAFAVETVTN-----ASNGKLAGLVNNAGIAIPGPLELLPIADFQHQIQVNLTGQLAVTQAFLGLLRQGQGRIVNMGSIAGRSAAPFLGAYNASKFALEAITDVMRLELRPWGISVSIIEPGTIATPIWDKSLTQADIDKENLSESAQNLYGQAMNAVRKQVGILASKGISADIVAQAVVHALTAKHPKTRYLVGQDAKIAA-MLKH----LLPDRVYD 275
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|797207237|ref|WP_045868189.1| (short-chain dehydrogenase/reductase [Tolypothrix sp. PCC 7601] >gi|407273665|gb|EKF05099.1| oxidoreductase, short chain dehydrogenase/reductase family protein [Tolypothrix sp. PCC 7601] >gi|1210172688|dbj|BAY91763.1| short-chain dehydrogenase/reductase SDR [Fremyella diplosiphon NIES-3275]) HSP 1 Score: 206.453 bits (524), Expect = 1.210e-60 Identity = 121/254 (47.64%), Postives = 157/254 (61.81%), Query Frame = 0
Query: 93 VVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFK-NLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLG 345
VVITG+STGIG SA L GF VFAGVRR D E L R+ P+ LDVTD+D + A E V + KLAGLVNNAGI + PLELLP+S M VNV G L VTQAFL LR+ QGRI+N+GS G + GAY++SK+ALEAI++ +RLELRPW ISVS++ PGTI + I K++ A + NL E LY Q +T ++V + + L A++HALT+ P++ Y++G
Sbjct: 9 VVITGASTGIGEASALLLDKLGFNVFAGVRREIDAEKLKRKASSRLTPIFLDVTDNDA-IALAVETVSKASNG-----KLAGLVNNAGIAIPGPLELLPISEFEHQMRVNVTGQLAVTQAFLGLLRQGQGRIVNMGSICGKSAAPFLGAYNASKFALEAITEVMRLELRPWGISVSIIRPGTIATPIWDKSLTQADIDRDNLPEFAQNLYGQAMNTVRKQVGIMASKGIAADLVAQAVVHALTAKQPKTSYLVG 256
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1210230844|dbj|BAZ49865.1| (short-chain dehydrogenase/reductase SDR [Nostoc sp. NIES-4103]) HSP 1 Score: 205.682 bits (522), Expect = 2.971e-60 Identity = 122/279 (43.73%), Postives = 163/279 (58.42%), Query Frame = 0
Query: 92 AVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAP-FKNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 369
AVVITG+S+GIG SA L G+ VFAGVRR D E L R+ P+LLDV D + + AA + TL D+G LAGLVNNAGI +A PLE LP+ LR+ +EVNV+G + VTQAFLP LR+ QGR+IN+ S G V G Y +SK+ALEA++DALR+EL+PW I V ++EPGT+ + I K++ A K + LY D L + I AL++ P++RYV+G +S+WL + + D LLD
Sbjct: 9 AVVITGASSGIGEASAIYLDNLGYQVFAGVRRDVDGEELKSKTSARLTPILLDVND-EASIKAAANTISATLNDVG----LAGLVNNAGIAVAGPLEFLPIDELRKQLEVNVIGQIAVTQAFLPLLRKAQGRVINISSDNGKVVVPFLGPYCASKFALEALTDALRIELQPWGIEVVIIEPGTVTTPIWNKSITLADDILKKMPPQALELYSLAVDATRNTAKKLSQNGFPASEVGKTIAKALSAKKPKTRYVVGLDAQMSIWLSK-----ILSDRLLD 277
BLAST of EWM23099.1 vs. NCBI_GenBank
Match: gi|1121221119|ref|WP_073548559.1| (oxidoreductase [Chroogloeocystis siderophila] >gi|1115264433|gb|OKH28104.1| short-chain dehydrogenase/reductase [Chroogloeocystis siderophila 5.2 s.c.1]) HSP 1 Score: 205.297 bits (521), Expect = 3.349e-60 Identity = 121/288 (42.01%), Postives = 172/288 (59.72%), Query Frame = 0
Query: 92 AVVITGSSTGIGRHSAAGLAAAGFLVFAGVRRVRDVETLVEAYPGRVFPLLLDVTDHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPF-KNLTESQYVLYQQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLDWGKMKMIDL 378
AVV+TG+STGIG A L GF VFAGVRR D + L ++ P+ LDVTD D + A +V + + G L GLVNNAGI + PLE +P++ R+ +EVNV G L VTQAFLP LR +GRI+N+GS G + GAYS+SK+ALEA++DALRLELRPW I V+++EPG I + I +K++ A ++L + + LY Q T + L + SP A++ ALT+ P++RY++G + +L F+PD ++D K ++L
Sbjct: 8 AVVVTGASTGIGAACALRLDHLGFQVFAGVRRKEDAQALQAKASPQLMPIFLDVTDLDS-ITAAMHKVAIAVGNSG----LIGLVNNAGIAVGAPLEFIPITEFRKQLEVNVTGQLAVTQAFLPLLRLAKGRIVNMGSITGRSATPFLGAYSASKFALEALTDALRLELRPWGIWVAIIEPGAISTPIWQKSLSQADTLQQSLPQPAHELYGQAMKTASKGAATLAQKGISPDKVAQAVVRALTAKRPKTRYLVGQDARI------RAMLSFLPDRIVDELTAKAMNL 284 The following BLAST results are available for this feature:
BLAST of EWM23099.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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