rna7591, rna7591 (mRNA) Nannochloropsis gaditana

Overview
Namerna7591
Unique Namerna7591
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length489
Alignment locationCM002472.1:316618..317302 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101567g2.9717.mrna
Orig protein idgnl|cribi|Naga_101567g2.9717
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:316618..317302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101567g2gene7348Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7591rna7591-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23101.1cds7571Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7591 ID=rna7591|Name=rna7591|organism=Nannochloropsis gaditana|type=mRNA|length=489bp
ATGGCTGCCACCTTGACCGCAGCGGCTCGTCGCAGCAGCGCTTCTCTTAC
CTCCCTTCTCCTCAAACGCCATGCTTCCACGTTAAAGGTCGGTGTGATTG
GAGCAGGACGCATCGGCCGTGTCCACCTGGAGACCTTGGCGGGCGTCCCG
GGGGTGCAACCCGTCATCCTCTCCGACGTGGTCGAGCCGGTCCTCAAGGA
GGTGACCGCGCAGTACGGCGTGCCCAACTACACCTTGGACGGTGATGAGG
TCATCAACCATCCCGACGTCCAGGCCGTCTGGATCTGCTCCCCCTCCCAA
TTCCACGCGGACCAGATCAAAAAATGCGCGAAAGCCGGGAAGCACGTCTT
CTGCGAGAAACCCATCGCCACCGACTTGAACGGGACCATCGAGGCCATCA
AGGTCGCAGACGAGGCAGGCATCAAGCTCATGACGGCCTTCCAACGGCAG
CGTGGGCGAGCCCATCAGCGCCATCCTCCAGTCCCGTGA
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protein sequence of rna7591

>rna7591-protein ID=rna7591-protein|Name=rna7591|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
MFHRSHRPPPQFLHVPLRGGLQERDHRLLPDSAGREGSLPFRARREDGFG
AGHGLRQVLQGEAPCQDYRDSPVSSREDDKGGWRWGGGAAYGEWRKEGRE
EGREEEAAVPPGKRRRKRGAGVEVMGKEGKPRQWDG
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mRNA from alignment at CM002472.1:316618..317302+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7591 ID=rna7591|Name=rna7591|organism=Nannochloropsis gaditana|type=mRNA|length=685bp|location=Sequence derived from alignment at CM002472.1:316618..317302+ (Nannochloropsis gaditana)
ATGTGTTCCGTTCCTCGCGCCTTGCCCGGCCGGCCCCTCCGGcgtttcct
tcttttccctccctccctccctcccgcccgccctccaccccaccttcacc
ctccctcccgccctccaccccaccttcaccctccctcccccccgctttcc
ccagTCCACCGGTCGCATCGACCTCCCCCACAATTTCTTCATGTCCCGCT
ACGCGGAGGCTTACAAGAACGAGACCATCGCCTTCTGCCAGACTctgcag
gaagggaaggctccctccccttccgggCACGACGGGAAGATGGCTTTGGT
GCTGGCCATGGCCTGCGACAAGTCCTTCAAGGAGAAGCGCCCTGtcaagt
gagggagggagggagggggaggacggagggggggagggagggaggagttg
cTTTTATCCCGACGCTTCTGATCCGATGCAAAAGTTTCTCACATCCTCGC
GGTCTTTTTTTCGTCCCTATAGGATTACCGAGATTCTCCCGTAAGCTCCA
GGGAGGATGAcaaaggagggtggaggtgggggggtgGAGCGGCGTATgga
gagtggaggaaggaggggagggaggaggggagggaggaggaagctgcggT
GCCgcctgggaagaggaggaggaagcggggagcGGGTGTGGAAGtgatgg
gaaaggaagggaagcccCGGCAGTGGGACGGGTAg
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Coding sequence (CDS) from alignment at CM002472.1:316618..317302+

>rna7591 ID=rna7591|Name=rna7591|organism=Nannochloropsis gaditana|type=CDS|length=1233bp|location=Sequence derived from alignment at CM002472.1:316618..317302+ (Nannochloropsis gaditana)
ATGTTCCACCGGTCGCATCGACCTCCCCCACAATTTCTTCATGTCCCGCT
ACGCGGAGGCTTACAAGAACGAGACCATCGCCTTCTGCCAGACTctgcag
gaagggaaggctccctccccttccgggCACGACGGGAAGATGGCTTTGGT
GCTGGCCATGGCCTGCGACAAGTCCTTCAAGGAGAAGCGCCCTGtcaaGA
TTACCGAGATTCTCCCGTAAGCTCCAGGGAGGATGAcaaaggagggtgga
ggtgggggggtgGAGCGGCGTATggagagtggaggaaggaggggagggag
gaggggagggaggaggaagctgcggTGCCgcctgggaagaggaggaggaa
gcggggagcGGGTGTGGAAGtgatgggaaaggaagggaagcccCGGCAGT
GGGACGGGTAgATGTTCCACCGGTCGCATCGACCTCCCCCACAATTTCTT
CATGTCCCGCTACGCGGAGGCTTACAAGAACGAGACCATCGCCTTCTGCC
AGACTctgcaggaagggaaggctccctccccttccgggCACGACGGGAAG
ATGGCTTTGGTGCTGGCCATGGCCTGCGACAAGTCCTTCAAGGAGAAGCG
CCCTGtcaaGATTACCGAGATTCTCCCGTAAGCTCCAGGGAGGATGAcaa
aggagggtggaggtgggggggtgGAGCGGCGTATggagagtggaggaagg
aggggagggaggaggggagggaggaggaagctgcggTGCCgcctgggaag
aggaggaggaagcggggagcGGGTGTGGAAGtgatgggaaaggaagggaa
gcccCGGCAGTGGGACGGGTAgATGTTCCACCGGTCGCATCGACCTCCCC
CACAATTTCTTCATGTCCCGCTACGCGGAGGCTTACAAGAACGAGACCAT
CGCCTTCTGCCAGACTctgcaggaagggaaggctccctccccttccgggC
ACGACGGGAAGATGGCTTTGGTGCTGGCCATGGCCTGCGACAAGTCCTTC
AAGGAGAAGCGCCCTGtcaaGATTACCGAGATTCTCCCGTAAGCTCCAGG
GAGGATGAcaaaggagggtggaggtgggggggtgGAGCGGCGTATggaga
gtggaggaaggaggggagggaggaggggagggaggaggaagctgcggTGC
CgcctgggaagaggaggaggaagcggggagcGGGTGTGGAAGtgatggga
aaggaagggaagcccCGGCAGTGGGACGGGTAg
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Synonyms
Publications