EWM23101.1, cds7571 (CDS) Nannochloropsis gaditana

Overview
NameEWM23101.1
Unique Namecds7571
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:316618..316621 +
Alignment locationCM002472.1:316772..316965 +
Alignment locationCM002472.1:317090..317302 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23101.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101567g2.9717.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:316618..316621 +
CM002472.1supercontigCM002472.1:316772..316965 +
CM002472.1supercontigCM002472.1:317090..317302 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23101.1 vs. NCBI_GenBank
Match: gi|585103965|gb|EWM23101.1| (hypothetical protein Naga_101567g2 [Nannochloropsis gaditana])

HSP 1 Score: 266.159 bits (679), Expect = 4.991e-90
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MFHRSHRPPPQFLHVPLRGGLQERDHRLLPDSAGREGSLPFRARREDGFGAGHGLRQVLQGEAPCQDYRDSPVSSREDDKGGWRWGGGAAYGEWRKEGREEGREEEAAVPPGKRRRKRGAGVEVMGKEGKPRQWDG 136
            MFHRSHRPPPQFLHVPLRGGLQERDHRLLPDSAGREGSLPFRARREDGFGAGHGLRQVLQGEAPCQDYRDSPVSSREDDKGGWRWGGGAAYGEWRKEGREEGREEEAAVPPGKRRRKRGAGVEVMGKEGKPRQWDG
Sbjct:    1 MFHRSHRPPPQFLHVPLRGGLQERDHRLLPDSAGREGSLPFRARREDGFGAGHGLRQVLQGEAPCQDYRDSPVSSREDDKGGWRWGGGAAYGEWRKEGREEGREEEAAVPPGKRRRKRGAGVEVMGKEGKPRQWDG 136
The following BLAST results are available for this feature:
BLAST of EWM23101.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103965|gb|EWM23101.1|4.991e-90100.00hypothetical protein Naga_101567g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7591rna7591Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications