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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100643g1.9562.mrna |
| Orig protein id | gnl|cribi|Naga_100643g1.9562 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:307738..312509 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7588 ID=rna7588|Name=rna7588|organism=Nannochloropsis gaditana|type=mRNA|length=1412bp
ACATCAGTATTATGTGCCCATAAGGGTGTTCTTAGCATGTCATCGCGAAG
TGTACGGTAAAGCGGTGACATGGTCATAATTAAGTTAGACAGGCGCCTTG
CTTGCAACGGGCTTCGACCTGGTATCCCATATACAGCGTATTTCGTCTAA
ACTCTACCACGGACGTCTCACACTGGACAGAGTAATGCCGTCGTTGCCTG
CATTGTCCCCTTCAACATTTCTCCACCGGTCCTTTTACTTCCTTTTTGTT
GCCACCATGCTTCTCCTTCATGTCTCCAAGGCCTTCCATAAGCCTCTTCC
CTTCTCACTCCTTGCCCCCCGCCGTCCTCACCACCGCCGTGCCTTACTCC
ATACACTCGTAGCATCTGCTTCCTCTTCATCTCCCCAAAACCAAAAGGTG
GGCTTCGTCGGCTTGGGTTACATGGGAGCCGGCATGGTCCGTCGCCTCCT
CGAGCGAGGGGACGACGTGATTGTGTGGAATAGAAGTCTGCGCAAGAGCG
AAGCCCTCTTAGCCGAATACCCTGCGCCCCGCGTAACAATCGCATCGACT
CCCAGACAAGTCCTGGAGGAGGCAGGTCTCATGACCTTTTCCATGCTCTC
CACTCCCGAAGCCGCCCATGCCGTTTTTGAAGGGCCCGACGGCGTACTGG
CCGGCGTCGGCCCTGGGACCAATTTGGTGGATTGTGCCACCTTGGAGGTG
AAAGACATGCAAAGCTTCGACGCTGCCGTACGGGAAAAGGGCGGTCGTTT
CCTCGAAGCGCCCGTGTCGGGGAGCAAGGTACCGGCAGAACAGGGGCAAT
TGGTATTTTTGACGGCGGGGGACCAAGAATTGTTCCAGCTTGCACAACCC
TACTTAGAAGCAATGGGGAAAGCGAATGTCTTTCTGGGGACCACGGGAAA
GGGAACGGAGATGAAGCTGGTCGTGAACATGGTCATGGCGACCATGATGA
CGTCCCTGGCCGAAGGCTTGAATTTGGCGGGAAAGGCCGGCATCGACCCA
GCGGAAGTAGTGAAGGTCCTGGGTTTAGGTGCCATGGCCAATCCGATGTT
TGCTCTGAAAGGGCCCAAAATCCTCCAAGATGATCACACCCCGAACTTCC
CCCTAAAACATGCCCAGAAAGATTTGGCCTTTGCGTTGACTTTGGCGGGA
CAGCTGGGTGCCCGGGTGCCGACGGCGCAGGCGGCGGACGAGGAATATCG
AAAGGCATTAGCGGCGGGGGAGGGCGAGAGAGACTTCTCTGCAGTAGCTC
ACAGGTTGATGGAGTGAGACTGGGAGTGTTGGGGCGGTTGCCCAGGCGGC
CACCGCTTTTTGACATAGGAAAGGATGGATGAGATACGTAGGTCAAGAAA
GTCTTCACGTCAGGGAAACAAAGTTGGTGGTATAGCTGTCATTTTAGCCT
TGAAAAGGGTAA back to topprotein sequence of rna7588 >rna7588-protein ID=rna7588-protein|Name=rna7588|organism=Nannochloropsis gaditana|type=polypeptide|length=932bp
MEDLLIRGDPAAALDLALRHSLFVEALLLAGHVPQHAVQPGSGGREGGGE
VGRGHAAPQQSRPQLTPVQQVIVAYSQASLPSGLPFHALCLHLTEQPLLS
PSPSASSAASHALAGPGNPFARAQQLQQQHQAKGQGSPSLPESDGPSPLP
LSHHWKRTLALLLSLPPSSSPCTPALPMSSPVPGATAARSPASSAAAAFT
PAPSPNHAILQLGDSLMRESPPKIREAHACYLIGGLLPGGGDEGGREDGP
EDGRLSFLLVGMDARKEGGKRLGTPEAVEAFYRADILDFLRQHYSHYRRL
GGGGGGVGRSGLAVQAHQSGGKETGVLPPRPSCLLQYYRLQMAKALAEGG
YMWEALDYAKSVKAFLLPFLTWDVVEGRITHFVLPPSLPPSLAPLWTRTL
AQEAIVFQARVEDEVGREGVRPKPLVAPVRRSSVQVGKGIVSGLMRNLGS
LVQETIHKSVFEEDAGREEPVEKKEGGKEGRTVTEGLYAPFVYKGPWGRV
VGRGGGEEGGREGKREGENALDNGPETAPFALRRFASAPAKPSSTPVPQQ
PPQQPQQQQQQAQHQQQPKQPGLPPNIPITASTSPSSSTSSTPSSPHPPP
NQWYPQGAMPRKSSSLVPSVGSSHPSSLSCSASGTSYASAVEDMSVSQHT
PMPPPSSLPAMVPPLPPPGRQVQRTADLNHVGGKGESAEGGRDGEGSSLA
HPPALPPSVPATDISTTGSTASNSGKSTSVHKAPAVKSVARSSSAGGSGT
STPTGGSGGGMVGRLAGLLGIKKPVTADLGEKMEAYFDKDKNRWIFPGQD
GEEEEEDASLKPPPTGPMGGVPAGGGHGAGNEGGNGGPMDALSAMMAPPP
LRGLPVRRATVGAPIGGPAGLGMGSGGGGGGGRGQGTAPGMAGRGGEAGG
GPRFFVPRKLTEQEQQEQQHQQQQQPGQQQHE back to topmRNA from alignment at CM002472.1:307738..312509- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7588 ID=rna7588|Name=rna7588|organism=Nannochloropsis gaditana|type=mRNA|length=4772bp|location=Sequence derived from alignment at CM002472.1:307738..312509- (Nannochloropsis gaditana)
GGTGTTCTCGCAGGAGGGAGGGTCCACGGCTTGGGAAAACCAGCAAGAAC
AATACCAGCAGCCGCAGCCGTTTCCACAAGGACACTACCATCCGCCCGCG
GGGGAAGAGCAACAGCAGGGAGTGGATGGAGGGCGCCCGTATGCTCCCCC
CCTTGAAGAACGTGGAGGGGAGGGGTTGGGAGGGGAAGGAGGAAAACATG
TATGGGAGGGGCAAGACAACACAAACGACCTTCCACAGGTCCAGGCGTCG
TGGATATCCTCCCCTCCCTCCCACCCTTCTTCCCTCCCTCCCCCCCGCCC
TCTCGCCTCCCCCGGCGCCTACCCCTCTTCCCACCCCGCCACAGTCCTTG
CCCCACTCGCTCAGCAACCTGCCCCTCCCACGGCCCATTTATCCTCACCG
GCCTCCACACGGGCACGCATGCCGTACGCGCCCGCCCCCCATCAGCCCTC
CGTGTTTAATCCCGCGGCGGTATTGGCTTCCCCGACGCTCCCATCCTCCT
CCCCTGCCTCCCTCCCCCCCTCGCTCTCGCCGTCGAGGCCGACCGGGGTC
TCACTGAGGGCGTCCGGGGGGCCAGGAGCCAGGGAGGGGGTTGGAGAGCA
CACGGGTTTTGACCCGACGGCGCATATCTCTTCCAGTGGAGAAGGCACAG
GAAGGGAGGGAGGGCGGGAGGGAGGGAGGAGTGCCGCGGAGACCTCCTTC
CATTTGCAGGCCGCACAGGCCAACCGAAGGCATTTCCGGCAACAGCAAGA
ACAGGCACCTCAACACCCCGCCGGCCCGGTGTCGTCGCAGCAGCCGCAAG
ACCAGCTTTACGGACAGGCAGGACCCCCGTCCCTCCAGGATCAAAGTCAC
GGCCTTCCCCCCAGCCCTGCAACCACCGCTGCCCCTGCCCTCCCTGCCCG
TGTCCCTCCTTCCGCACCTGCTTCCTTCCCTCCCCGAACGCCGGGAGGGG
GAACGTGCTACGCCCGGCGTGACCGACGCCATCCACGGCCGCGGGGAACC
CCCCTCTCCTTCTCCCTGACCCATCTCCTCCTTTCGCCCCCCACGCAGAG
CAAGCGTTTCCGCTCCCTGGCTCCCTCCCACCACCCAGGAGGACAAGAAG
CGGGTCACGGGGAAGGAGTGGGTGGGGAGGAGAAGGGCCTGCGGAAAGGG
CCTGTTCGGCTGCGGGCCTTGGAGAAGGAAACGGGGCCGGTGCTTCCCCT
CTTTGTCGACGCCGTTGCCGCGGCCGCTGCCGCCGGAGGGGGTGCGGGGG
AACCGCGGCCGGCGTGCGATTGGACCGTGGAGAAAGCCTTGGCCTTTGCG
CGATGTCGGGTCGAGGCCTGGGGGGGGCGACGGAGGGAGCCAGGGCGTGC
CGAGGGCGAATGGTTGCTGTGGAAATTGGTGGAAGTCGCCTGCAAGCATC
GGGGGCACCTGAGGTCGCTGGCGGGAGCTGTGGATGCGCGTTCGCCCGAG
ACGGAAGTGATCGAGGCGTTGCGGGGGGAGGATAGGAGGGAGGGCGGGAG
GGAAGACGGGAGGGAGGGCGGCTTAAACGCGACGCGTGGATCCGGCCCGC
CTCCCAAACCCTTCCCCGCACCAGCTTTACCCTTCCCCCCCTCCCTCCTT
CCCCGACACCTTCTCAACGCGCGGTCATCGTGGAGGAAATGGAGGATCTG
TTGATCCGAGGAGACCCTGCGGCCGCTTTGGATCTGGCCCTCCGCCACTC
CCTCTTCGTTGAGGCCCTGCTCTTGGCCGGCCATGTGCCCCAGCATGCCG
TCCAGCCCGGTTCGGGTGGGAGGGAGGGAGGAGGGGAAGTAGGACGGGGA
CATGCCGCTCCGCAGCAAAGCCGTCCCCAGCTAACACCCGTACAGCAGGT
CATCGTGGCGTATTCCCAAGCCTCCCTCCCCTCCGGCCTACCTTTCCACG
CCCTCTGTCTCCACTTGACCGAGCAGCCCCTCCTTTCCCCATCCCCTTCT
GCTTCCTCTGCTGCCTCCCACGCCCTTGCTGGTCCTGGAAACCCCTTTGC
TCGGGCACAGCAACTGCAGCAACAGCACCAAGCCAAAGGGCAGGGATCGC
CTTCCCTTCCTGAGAGTGACGGGCCTTCGCCTCTTCCCCTTTCCCACCAT
TGGAAGCGGACCCTCGCCCTCCTTCTCTCCCTCCCTCCGTCTTCCTCTCC
TTGCACCCCCGCCCTCCCCATGTCCAGCCCCGTTCCTGGGGCGACTGCGG
CCCGCTCGCCTGCTTCCTCCGCGGCTGCCGCCTTCACGCCTGCGCCTAGC
CCCAATCACGCCATCTTGCAGCTTGGTGACTCACTGATGCGGGAGAGCCC
TCCCAAAATCAGGGAGGCCCATGCCTGCTACCTGATTGGAGGGCTTTTGC
CGGGGGGAGGGGACGAAGGGGGGAGGGAGGACGGGCCGGAGGATGGTCGC
TTGTCCTTCCTGTTGGTGGGAATGGATGCCCGGAAGGAAGGCGGGAAAAG
GCTGGGCACGCCTGAGGCCGTGGAAGCGTTTTACAGGGCGGACATTCTCG
ACTTTCTCCGCCAACATTACAGCCACTACCGACGCCTGGGAGGGGGGGGA
GGGGGAGTGGGCAGGTCGGGCCTTGCTGTTCAGGCGCACCAATCGGGGGG
AAAAGAAACCGGTGTCCTTCCCCCCCGCCCAAGCTGTCTCCTCCAATACT
ACCGGCTGCAGATGGCCAAGGCCTTGGCGGAAGGCGGGTATATGTGGGAG
GCTCTTGACTACGCCAAGAGCGTGAAAGCCTTCCTCCTTCCCTTCCTCAC
CTGGGACGTGGTCGAAGGCCGGATCACGCACTTTGTCCTCCCGCCTTCCC
TCCCTCCTTCCCTTGCCCCTTTGTGGACCCGGACGCTCGCCCAAGAGGCG
ATTGTTTTCCAGGCCCGAGTCGAGGACGAGGTAGGGAGGGAGGGCGTGCG
ACCCAAGCCCCTGGTGGCGCCTGTGAGGAGGAGCAGCGTGCAGGTGGGGA
AGGGCATTGTGAGTGGCTTGATGCGGAATTTGGGGAGTCTGGTGCAAGAG
ACCATCCATAAAAGTGTCTTTGAGGAAGACGCAGGGAGGGAAGAGCCAGT
GGAGAAGAAGGAGGGGGGGAAAGAAGGGAGGACGGTCACTGAGGGCTTGT
ACGCCCCTTTCGTCTACAAGGGACCCTGGGGACGTGTGGTTGGGAGGGGG
GGAGGGGAGGAAGGAGGGCGGGAGGGCAAGAGGGAGGGGGAAAATGCCCT
GGACAATGGGCCGGAAACGGCACCCTTTGCACTGCGTCGCTTTGCCTCTG
CCCCTGCCAAGCCGTCCTCCACACCAGTGCCGCAACAGCCGCCACAACAA
CCCCAGCAGCAGCAACAACAGGCACAGCATCAGCAGCAGCCGAAGCAGCC
AGGCCTCCCTCCCAATATCCCCATCACCGCCTCGACCTCCCCCTCCTCCT
CCACCTCTTCCACCCCCTCGAGCCCTCACCCTCCGCCCAACCAGTGGTAC
CCCCAGGGAGCCATGCCACGGAAGTCTTCCTCCCTCGTGCCCTCCGTCGG
CTCCTCCCACCCGTCCTCCCTCTCTTGTTCCGCGTCCGGAACATCCTACG
CCAGCGCCGTGGAGGACATGAGCGTCAGTCAACACACCCCCATGCCTCCT
CCTTCCTCCTTGCCGGCCATGGTCCCGCCCCTTCCCCCTCCGGGTCGTCA
AGTGCAGCGCACTGCTGACTTGAACCATGTCGGAGGGAAAGGAGAAAGTG
CGGAGGGAGGGAGAGACGGAGAGGGATCCTCCCTCGCCCACCCGCCTGCC
CTTCCTCCTTCGGTCCCCGCGACGGATATCAGCACGACCGGAAGCACCGC
CAGCAACAGCGGCAAGAGTACCAGCGTCCATAAGGCTCCCGCTGTGAAAA
GTGTGGCCAGAAGCAGCAGCGCAGGGGGAAGTGGTACCAGCACTCCCACG
GGAGGGAGCGGGGGAGGGATGGTGGGGAGGCTGGCCGGTCTGCTGGGAAT
TAAGAAACCGGTGACGGCGGACCTGGGGGAAAAAATGGAGGCCTATTTCG
ACAAGGACAAGAATCGATGGATTTTCCCGGGCCAGGACGGCGAAGAGGAG
GAGGAAGATGCGTCCTTGAAACCCCCGCCAACGGGTCCCATGGGAGGTGT
CCCCGCGGGAGGAGGACATGGGGCCGGGAACGAAGGCGGGAATGGCGGCC
CGATGGATGCTTTGAGCGCGATGATGGCGCCGCCGCCCCTGCGAGGTCTC
CCCGTGCGAAGGGCGACCGTGGGGGCTCCCATTGGGGGCCCGGCGGGGCT
TGGGATGGGAAGTGGAGGAGGGGGGGGGGGCGGGAGGGGTCAGGGCACAG
CACCTGGTATGGCAGGGAGGGGAGGGGAGGCGGGAGGGGGGCCGCGGTTT
TTTGTCCCACGAAAGCTTACCGAGCAAGAACAACAGGAGCAGCAACATCA
ACAGCAGCAGCAACCAGGGCAACAACAGCATGAGTAGCGGTCGTTCTATT
GCAGGGACCGGAAATGGCGAATCTTCTGTTGCGATCATAGCACGTGTTCG
CCTGTGACAAAGCGGATGCTTCATGTTTCCTGCGAGACGAAAAACGCAGC
GTGCGTGTTAGAACGACCAGCATACGGATGGGAGATGTGGTGGAGTGGGG
AGAGGGAGGCAGTTAGGGAATTATGAAGGGTTTGAGAGCCCTGAGAAGAT
CTCGATAGAGATTGAAAATCAATAGGAAGGAATGGCGAGACGGAAGCGAG
ACGGATGCCAAAAATAGATAGAAGCTTTTACCCTTTTCAAGGCTAAAATG
ACAGCTATACCACCAACTTTGT back to topCoding sequence (CDS) from alignment at CM002472.1:307738..312509- >rna7588 ID=rna7588|Name=rna7588|organism=Nannochloropsis gaditana|type=CDS|length=2799bp|location=Sequence derived from alignment at CM002472.1:307738..312509- (Nannochloropsis gaditana)
ATGGAGGATCTGTTGATCCGAGGAGACCCTGCGGCCGCTTTGGATCTGGC
CCTCCGCCACTCCCTCTTCGTTGAGGCCCTGCTCTTGGCCGGCCATGTGC
CCCAGCATGCCGTCCAGCCCGGTTCGGGTGGGAGGGAGGGAGGAGGGGAA
GTAGGACGGGGACATGCCGCTCCGCAGCAAAGCCGTCCCCAGCTAACACC
CGTACAGCAGGTCATCGTGGCGTATTCCCAAGCCTCCCTCCCCTCCGGCC
TACCTTTCCACGCCCTCTGTCTCCACTTGACCGAGCAGCCCCTCCTTTCC
CCATCCCCTTCTGCTTCCTCTGCTGCCTCCCACGCCCTTGCTGGTCCTGG
AAACCCCTTTGCTCGGGCACAGCAACTGCAGCAACAGCACCAAGCCAAAG
GGCAGGGATCGCCTTCCCTTCCTGAGAGTGACGGGCCTTCGCCTCTTCCC
CTTTCCCACCATTGGAAGCGGACCCTCGCCCTCCTTCTCTCCCTCCCTCC
GTCTTCCTCTCCTTGCACCCCCGCCCTCCCCATGTCCAGCCCCGTTCCTG
GGGCGACTGCGGCCCGCTCGCCTGCTTCCTCCGCGGCTGCCGCCTTCACG
CCTGCGCCTAGCCCCAATCACGCCATCTTGCAGCTTGGTGACTCACTGAT
GCGGGAGAGCCCTCCCAAAATCAGGGAGGCCCATGCCTGCTACCTGATTG
GAGGGCTTTTGCCGGGGGGAGGGGACGAAGGGGGGAGGGAGGACGGGCCG
GAGGATGGTCGCTTGTCCTTCCTGTTGGTGGGAATGGATGCCCGGAAGGA
AGGCGGGAAAAGGCTGGGCACGCCTGAGGCCGTGGAAGCGTTTTACAGGG
CGGACATTCTCGACTTTCTCCGCCAACATTACAGCCACTACCGACGCCTG
GGAGGGGGGGGAGGGGGAGTGGGCAGGTCGGGCCTTGCTGTTCAGGCGCA
CCAATCGGGGGGAAAAGAAACCGGTGTCCTTCCCCCCCGCCCAAGCTGTC
TCCTCCAATACTACCGGCTGCAGATGGCCAAGGCCTTGGCGGAAGGCGGG
TATATGTGGGAGGCTCTTGACTACGCCAAGAGCGTGAAAGCCTTCCTCCT
TCCCTTCCTCACCTGGGACGTGGTCGAAGGCCGGATCACGCACTTTGTCC
TCCCGCCTTCCCTCCCTCCTTCCCTTGCCCCTTTGTGGACCCGGACGCTC
GCCCAAGAGGCGATTGTTTTCCAGGCCCGAGTCGAGGACGAGGTAGGGAG
GGAGGGCGTGCGACCCAAGCCCCTGGTGGCGCCTGTGAGGAGGAGCAGCG
TGCAGGTGGGGAAGGGCATTGTGAGTGGCTTGATGCGGAATTTGGGGAGT
CTGGTGCAAGAGACCATCCATAAAAGTGTCTTTGAGGAAGACGCAGGGAG
GGAAGAGCCAGTGGAGAAGAAGGAGGGGGGGAAAGAAGGGAGGACGGTCA
CTGAGGGCTTGTACGCCCCTTTCGTCTACAAGGGACCCTGGGGACGTGTG
GTTGGGAGGGGGGGAGGGGAGGAAGGAGGGCGGGAGGGCAAGAGGGAGGG
GGAAAATGCCCTGGACAATGGGCCGGAAACGGCACCCTTTGCACTGCGTC
GCTTTGCCTCTGCCCCTGCCAAGCCGTCCTCCACACCAGTGCCGCAACAG
CCGCCACAACAACCCCAGCAGCAGCAACAACAGGCACAGCATCAGCAGCA
GCCGAAGCAGCCAGGCCTCCCTCCCAATATCCCCATCACCGCCTCGACCT
CCCCCTCCTCCTCCACCTCTTCCACCCCCTCGAGCCCTCACCCTCCGCCC
AACCAGTGGTACCCCCAGGGAGCCATGCCACGGAAGTCTTCCTCCCTCGT
GCCCTCCGTCGGCTCCTCCCACCCGTCCTCCCTCTCTTGTTCCGCGTCCG
GAACATCCTACGCCAGCGCCGTGGAGGACATGAGCGTCAGTCAACACACC
CCCATGCCTCCTCCTTCCTCCTTGCCGGCCATGGTCCCGCCCCTTCCCCC
TCCGGGTCGTCAAGTGCAGCGCACTGCTGACTTGAACCATGTCGGAGGGA
AAGGAGAAAGTGCGGAGGGAGGGAGAGACGGAGAGGGATCCTCCCTCGCC
CACCCGCCTGCCCTTCCTCCTTCGGTCCCCGCGACGGATATCAGCACGAC
CGGAAGCACCGCCAGCAACAGCGGCAAGAGTACCAGCGTCCATAAGGCTC
CCGCTGTGAAAAGTGTGGCCAGAAGCAGCAGCGCAGGGGGAAGTGGTACC
AGCACTCCCACGGGAGGGAGCGGGGGAGGGATGGTGGGGAGGCTGGCCGG
TCTGCTGGGAATTAAGAAACCGGTGACGGCGGACCTGGGGGAAAAAATGG
AGGCCTATTTCGACAAGGACAAGAATCGATGGATTTTCCCGGGCCAGGAC
GGCGAAGAGGAGGAGGAAGATGCGTCCTTGAAACCCCCGCCAACGGGTCC
CATGGGAGGTGTCCCCGCGGGAGGAGGACATGGGGCCGGGAACGAAGGCG
GGAATGGCGGCCCGATGGATGCTTTGAGCGCGATGATGGCGCCGCCGCCC
CTGCGAGGTCTCCCCGTGCGAAGGGCGACCGTGGGGGCTCCCATTGGGGG
CCCGGCGGGGCTTGGGATGGGAAGTGGAGGAGGGGGGGGGGGCGGGAGGG
GTCAGGGCACAGCACCTGGTATGGCAGGGAGGGGAGGGGAGGCGGGAGGG
GGGCCGCGGTTTTTTGTCCCACGAAAGCTTACCGAGCAAGAACAACAGGA
GCAGCAACATCAACAGCAGCAGCAACCAGGGCAACAACAGCATGAGTAG back to top
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