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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100316g6.2358.mrna |
| Orig protein id | gnl|cribi|Naga_100316g6.2358 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:292973..294929 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7580 ID=rna7580|Name=rna7580|organism=Nannochloropsis gaditana|type=mRNA|length=510bp
ATGCGAGGAGGAGGAGCACCACTCCCAGTCCCACCACCACCGCAGCAGCA
GTCCCATCATCTGGCGCAGGTCGTGGAGAGCCACGGAGCGGGGTCGAAGA
AGGGGAATTCAGGCACCTACAAGACGATTGAGGAAGTCAAGTGCCTCAAC
TTCGTGATCCTGACGCATTCGATGGGGCGTGTGTTTAACAACGTGGGCCC
CGATCTGAAGGAGACGAAGGAGAACAAGGCCGTGGGGGTGGAACGGCCAC
GGTATGATCTGGATTTTCGACACAGCGTGGAGTGCTTCCGGTCGTTTGAC
ATTGCCTTCGAGAAGGATGAGGTCATGACGAAAGCACAGCGGTCCGTGGA
GGCGCTGGCGTCCGCGGTGTACTACATGTGCTCCTACGTCCCCACCATCG
GCAGCCGCTACGCCACATTGCCTCTCACGCTGGCGGAGCTGGGCGTCTTT
TACATACGTGCAGACAGCCCGATCGCTCAGCCCATCCTCCGTGACCCCTC
GCGGTACTAG back to topprotein sequence of rna7580 >rna7580-protein ID=rna7580-protein|Name=rna7580|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MRCNESTGKASKSVSSSSILSRPSAIKACLRWDLKPWLILVSTACIMLWL
SATLVPTDLYKKIALAQVKKKPKLFLHIGAHKTGSSYIKYQMMRSRDFLL
QRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPLGDLTRT
LESIHRDNDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQ
EHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTA
NGRNHIHGVCYKRVLETYGRHFGPENMVVVHYNGVMDAQKDPWEVLVREV
MMLEMGKEATAEKGAKRSLQQGKGGTKINASLNPLTYSTAVLFYRWRWGN
LRGQVNSTTSAAASPSPAEEPSQIDNTTRLPDTGCVSRFLKPLEDLLPKQ
CFDLRALASLWEAQERQSLNEMARKGSRLLYFDWAKDAAGDMRVVFNDAN
PSLPCQVHLEQLFEEHGENVLKTIPARFLPAFEQVAAKVDDKC back to topmRNA from alignment at CM002472.1:292973..294929+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7580 ID=rna7580|Name=rna7580|organism=Nannochloropsis gaditana|type=mRNA|length=1957bp|location=Sequence derived from alignment at CM002472.1:292973..294929+ (Nannochloropsis gaditana)
TGCAATTGAAATTTTGACAACTAATTCTTTGGTAATAGTTAGGTTATAGA
ACCCCTGAAATATGGAACCTTGCTTAAAAAGTAAGGTTGATATAAAACTG
GGTGCGGTATCCCGGAGGTGACAAACCATGGCCCATATACCTTGTGTGAT
GTTAGACTGTGTCCGATCAAAGGTGTCGTGAATAATGGTTTTGTGTCATG
TATTTTGTGGCAGCATCCCAATCACCTGCTGAGGAGCCATTACAAGTCCA
TAATACCACCAGACTCCCTGACACTGGGTGTGAATACCCATAATACACAC
CGCTCAGATAAACAACTTTGGCGCGGCACTCGACATGAGGTGTAATGAGA
GCACTGGCAAAGCCAGCAAAAGCGTCAGCAGCTCATCAATACTCAGCCGC
CCAAGCGCGATCAAAGCTTGTCTCCGATGGGACTTAAAACCATGGCTTAT
CCTGGTGAGCACTGCTTGCATTATGCTGTGGTTGTCCGCAACACTAGTTC
CTACAGATTTGTACAAAAAGATTGCGCTGGCGCAAGTGAAAAAGAAGCCG
AAGCTTTTTCTTCACATCGGTGCACACAAGACGGGCTCTTCATACATCAA
ATATCAAATGATGCGATCGCGAGATTTCCTGCTGCAAAGAGGTATTATGT
TGCCTATGGGCTGTTATGGGGACACTAACTCTCCATCTTCTCTGTTTCGT
GCGGTTGCCATGCAACTTCAGGGCATGAAAATCCCAGAAGCGAAGAATTG
CCCTGAAAATCCTCTCGGCGACTTGACGAGGACTCTGGAATCAATCCATC
GAGACAACGATTCCCAAAATATCTTCATATCCAGCGAACATTTCGACAAT
CTCAACGATGAAATGGTGGCAGAAGTGACCAAACTTTTTTCGAATTTTCA
AACCACGGTGGTGCTTTACTACCGACGCAAGCAGGAACATCTCGTCAGCT
ACTACAGCGAGTTTGCCAAAAGGGCAGATCCGCTCAAGTCCCCCCTGCAC
CTGAGTGACTTTTTGTGGAACGTGATGGCGGAAGTAGACCCCGAGGCGGA
TGTGTCAGGTCCCCTGCCTAGCGTCCCTACTGCCAACGGGCGGAATCACA
TCCATGGCGTGTGCTACAAGCGTGTCCTAGAAACATACGGCAGACATTTT
GGTCCCGAGAACATGGTAGTGGTGCACTACAATGGCGTAATGGACGCTCA
GAAAGACCCCTGGGAAGTCCTGGTACGGGAAGTTATGATGCTGGagatgg
gaaaggaagcgacggCGGAGAAGGGCGCCAAAAGGAGCCTTCagcaaggg
aaaggggggacaAAAATCAATGCCTCCCTGAACCCATTAACGTACTCCAC
CGCGGTTTTGTTTTATCGATGGCGTTGGGGCAACTTGAGGGGCCAAGTGA
ACTCGACCACGTCCGCGGCAGCATCCCCATCACCTGCCGAGGAGCCATCA
CAAATCGATAATACCACCAGACTCCCTGACACTGGATGCGTGAGTCGCTT
TCTAAAGCCTTTGGAGGACCTGCTGCCCAAGCAATGTTTCGATTTGAGAG
CGTTGGCTAGCCTGTGGGAGGCGCAAGAGCGGCAAAGTTTGAATgagatg
gcgaggaagggatccCGATTGCTCTACTTTGATTGGGCCAAAGACGCTGC
CGGAGATATGCGCGTTGTCTTCAACGACGCgaacccctcccttccatgcc
AGGTTCACCTGGAACAGCTTTTCGAAGAGCATGGTGAGAACGTCTTGAAG
ACTATCCCTGCTCGATTCTTGCCTGCTTTTGAGCAGGTGGCGGCGAAGGT
CGATGACAAATGCTGATAGACACAATGTATTATACAGAAAAGCCTTTAAA
TAGAAATAAAGTATCTGCAGGGTACAAGCAAATGTGCGAATTTTCTTGAA
TCTGCTATCATTTGTCGAAAGCAGCTATGACTTTTACGGGCAATTAAATA
ACAATGG back to topCoding sequence (CDS) from alignment at CM002472.1:292973..294929+ >rna7580 ID=rna7580|Name=rna7580|organism=Nannochloropsis gaditana|type=CDS|length=1482bp|location=Sequence derived from alignment at CM002472.1:292973..294929+ (Nannochloropsis gaditana)
ATGAGGTGTAATGAGAGCACTGGCAAAGCCAGCAAAAGCGTCAGCAGCTC
ATCAATACTCAGCCGCCCAAGCGCGATCAAAGCTTGTCTCCGATGGGACT
TAAAACCATGGCTTATCCTGGTGAGCACTGCTTGCATTATGCTGTGGTTG
TCCGCAACACTAGTTCCTACAGATTTGTACAAAAAGATTGCGCTGGCGCA
AGTGAAAAAGAAGCCGAAGCTTTTTCTTCACATCGGTGCACACAAGACGG
GCTCTTCATACATCAAATATCAAATGATGCGATCGCGAGATTTCCTGCTG
CAAAGAGGTATTATGTTGCCTATGGGCTGTTATGGGGACACTAACTCTCC
ATCTTCTCTGTTTCGTGCGGTTGCCATGCAACTTCAGGGCATGAAAATCC
CAGAAGCGAAGAATTGCCCTGAAAATCCTCTCGGCGACTTGACGAGGACT
CTGGAATCAATCCATCGAGACAACGATTCCCAAAATATCTTCATATCCAG
CGAACATTTCGACAATCTCAACGATGAAATGGTGGCAGAAGTGACCAAAC
TTTTTTCGAATTTTCAAACCACGGTGGTGCTTTACTACCGACGCAAGCAG
GAACATCTCGTCAGCTACTACAGCGAGTTTGCCAAAAGGGCAGATCCGCT
CAAGTCCCCCCTGCACCTGAGTGACTTTTTGTGGAACGTGATGGCGGAAG
TAGACCCCGAGGCGGATGTGTCAGGTCCCCTGCCTAGCGTCCCTACTGCC
AACGGGCGGAATCACATCCATGGCGTGTGCTACAAGCGTGTCCTAGAAAC
ATACGGCAGACATTTTGGTCCCGAGAACATGGTAGTGGTGCACTACAATG
GCGTAATGGACGCTCAGAAAGACCCCTGGGAAGTCCTGGTACGGGAAGTT
ATGATGCTGGagatgggaaaggaagcgacggCGGAGAAGGGCGCCAAAAG
GAGCCTTCagcaagggaaaggggggacaAAAATCAATGCCTCCCTGAACC
CATTAACGTACTCCACCGCGGTTTTGTTTTATCGATGGCGTTGGGGCAAC
TTGAGGGGCCAAGTGAACTCGACCACGTCCGCGGCAGCATCCCCATCACC
TGCCGAGGAGCCATCACAAATCGATAATACCACCAGACTCCCTGACACTG
GATGCGTGAGTCGCTTTCTAAAGCCTTTGGAGGACCTGCTGCCCAAGCAA
TGTTTCGATTTGAGAGCGTTGGCTAGCCTGTGGGAGGCGCAAGAGCGGCA
AAGTTTGAATgagatggcgaggaagggatccCGATTGCTCTACTTTGATT
GGGCCAAAGACGCTGCCGGAGATATGCGCGTTGTCTTCAACGACGCgaac
ccctcccttccatgccAGGTTCACCTGGAACAGCTTTTCGAAGAGCATGG
TGAGAACGTCTTGAAGACTATCCCTGCTCGATTCTTGCCTGCTTTTGAGC
AGGTGGCGGCGAAGGTCGATGACAAATGCTGA back to top
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