EWM23115.1, cds7560 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23115.1 vs. NCBI_GenBank
Match: gi|585103988|gb|EWM23115.1| (hypothetical protein Naga_100316g6 [Nannochloropsis gaditana]) HSP 1 Score: 1033.86 bits (2672), Expect = 0.000e+0 Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0
Query: 1 MRCNESTGKASKSVSSSSILSRPSAIKACLRWDLKPWLILVSTACIMLWLSATLVPTDLYKKIALAQVKKKPKLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPLGDLTRTLESIHRDNDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTANGRNHIHGVCYKRVLETYGRHFGPENMVVVHYNGVMDAQKDPWEVLVREVMMLEMGKEATAEKGAKRSLQQGKGGTKINASLNPLTYSTAVLFYRWRWGNLRGQVNSTTSAAASPSPAEEPSQIDNTTRLPDTGCVSRFLKPLEDLLPKQCFDLRALASLWEAQERQSLNEMARKGSRLLYFDWAKDAAGDMRVVFNDANPSLPCQVHLEQLFEEHGENVLKTIPARFLPAFEQVAAKVDDKC 493
MRCNESTGKASKSVSSSSILSRPSAIKACLRWDLKPWLILVSTACIMLWLSATLVPTDLYKKIALAQVKKKPKLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPLGDLTRTLESIHRDNDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTANGRNHIHGVCYKRVLETYGRHFGPENMVVVHYNGVMDAQKDPWEVLVREVMMLEMGKEATAEKGAKRSLQQGKGGTKINASLNPLTYSTAVLFYRWRWGNLRGQVNSTTSAAASPSPAEEPSQIDNTTRLPDTGCVSRFLKPLEDLLPKQCFDLRALASLWEAQERQSLNEMARKGSRLLYFDWAKDAAGDMRVVFNDANPSLPCQVHLEQLFEEHGENVLKTIPARFLPAFEQVAAKVDDKC
Sbjct: 1 MRCNESTGKASKSVSSSSILSRPSAIKACLRWDLKPWLILVSTACIMLWLSATLVPTDLYKKIALAQVKKKPKLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPLGDLTRTLESIHRDNDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTANGRNHIHGVCYKRVLETYGRHFGPENMVVVHYNGVMDAQKDPWEVLVREVMMLEMGKEATAEKGAKRSLQQGKGGTKINASLNPLTYSTAVLFYRWRWGNLRGQVNSTTSAAASPSPAEEPSQIDNTTRLPDTGCVSRFLKPLEDLLPKQCFDLRALASLWEAQERQSLNEMARKGSRLLYFDWAKDAAGDMRVVFNDANPSLPCQVHLEQLFEEHGENVLKTIPARFLPAFEQVAAKVDDKC 493
BLAST of EWM23115.1 vs. NCBI_GenBank
Match: gi|585099714|gb|EWM20272.1| (hypothetical protein Naga_100167g8 [Nannochloropsis gaditana]) HSP 1 Score: 696.041 bits (1795), Expect = 0.000e+0 Identity = 332/493 (67.34%), Postives = 390/493 (79.11%), Query Frame = 0
Query: 1 MRCNESTGKASKSVSSSSILSRPSAIKACLRWDLKPWLILVSTACIMLWLSATLVPTDLYKKIALAQVKKKPKLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPLGDLTRTLESIHRDNDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTANGRNHIHGVCYKRVLETYGRHFGPENMVVVHYNGVMDAQKDPWEVLVREVMMLEMGKEATAEKGAKRSLQQGKGGTKINASLNPLTYSTAVLFYRWRWGNLRGQVNSTTSAAASPSPAEEPSQIDNTTRLPDTGCVSRFLKPLEDLLPKQCFDLRALASLWEAQERQSLNEMARKGSRLLYFDWAKDAAGDMRVVFNDANPSLPCQVHLEQLFEEHGENVLKTIPARFLPAFEQVAAKVDDKC 493
MRCN+S + +S +SS+ S P AI ACL + P L+L+ TACIML L+ L P+ LY ALA V+K PK+FLHIGAHKT ++YI+ +M+RS++FLLQRG++LP C DT +P+ F V LQG K ++K C ENP +L RTL SIHRDN SQNIFISSE +DNLNDEMVAEV KLFSNFQTTVV+YYRRK+EHLVSYYSEFAKR +PL PL L DFLWNVMA+V+PEADVS PLPSVPTA G I+G+CY RVLETY RHF P+N+V+VHY+GV+DA+KDPWEVL++EVMML M KEATAEKG K SLQQ TKIN SL P +YS AV+FYRWRWGNL Q N TT+ ASP PA +P+Q+ N RLPD CVSRFLKPLEDLLPKQCFD AL SLWEAQERQ LNEMA+KGSRLLYF+WAKDAAGDMRV+F D N SLPCQVH+EQL +EHG +V +TIP+RFL F+QVAAKVD+ C
Sbjct: 1 MRCNKSPLRPRRS-DNSSLFSCPRAINACLPRYVNPRLVLMITACIMLPLATILSPSQLYNNSALAHVRKMPKIFLHIGAHKTATTYIQSKMVRSKEFLLQRGVILPSICSSDTEAPTYRFYEVPKYLQGTKFAKSKYCSENPFDELNRTLNSIHRDNVSQNIFISSEEYDNLNDEMVAEVAKLFSNFQTTVVVYYRRKKEHLVSYYSEFAKRGNPLTLPLPLGDFLWNVMAKVNPEADVSDPLPSVPTAGGHIPINGLCYNRVLETYSRHFDPKNVVIVHYDGVVDAEKDPWEVLLQEVMMLGMDKEATAEKGDKWSLQQATRPTKINGSLRPFSYSAAVIFYRWRWGNLTDQTNWTTTVTASPLPATQPTQVKNIIRLPDAECVSRFLKPLEDLLPKQCFDSTALTSLWEAQERQKLNEMAKKGSRLLYFEWAKDAAGDMRVIFKDLNSSLPCQVHMEQLLKEHGADVFRTIPSRFLSTFQQVAAKVDENC 492
BLAST of EWM23115.1 vs. NCBI_GenBank
Match: gi|1011630924|ref|WP_062481290.1| (hypothetical protein [Lacimicrobium alkaliphilum] >gi|962032925|gb|ALS99239.1| hypothetical protein AT746_13895 [Lacimicrobium alkaliphilum]) HSP 1 Score: 72.4034 bits (176), Expect = 2.513e-10 Identity = 86/362 (23.76%), Postives = 137/362 (37.85%), Query Frame = 0
Query: 73 KLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPLGDLTRTLESIHRD---NDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTANGRNHIHGVCYKRVLETYGRHFGPENMVVVHYNGVMDA-------QKDPWEVLVREVMMLEMGKEATAEKGAKRSLQQGKGGTKINASLNPLTYSTAVLFYRWRWGNLRGQVNSTTSAAASPSPAEEPSQIDNTTRL--------PDTGCVSRFLKPL-EDLLPKQCFDLRALASLWEAQE 415
KL LHIG HKTG++ I+ ++ + L Q G + P+ C G + + S +A L+ K+ + K R L+ I + Q + +S E F LN + VAE+ L +F V +Y+R + ++S +SE K S L + N R V Y R L ++ + FG E + V Y+ + D E L+RE+ EM A G +N+ +P+ V F G +R + + + + D R D L PL ED+LP++ DL +L E++E
Sbjct: 2 KLILHIGTHKTGTTAIQQFLLANEKALYQSGTLYPVSCLGQSKNQYSY---LATLLRHGKLTKVK-----------RDLKLIREEALAKRCQTVILSGEEFSTLNYQHVAELCDLLGDFDVEVKIYFRNAYDFVISAFSEINK---------------------------TSRSLTKIEKLNKRLS-RLVDYDRTLNSWCKVFGDEAVDVYSYDRIKHECIPHFLRSVDIDENLIRELTANEM---MNAYSG-------------VNSRFDPIASFLLVFF-----GKIRDSRDYDVAKETCGKIFSDKNSSDQLLRFLAHKYLKAKDVKYSHHKLLPLIEDILPEESIDLEQAHALLESRE 300
BLAST of EWM23115.1 vs. NCBI_GenBank
Match: gi|659848831|ref|WP_029896349.1| (hypothetical protein [Desulfovibrio sp. L21-Syr-AB]) HSP 1 Score: 65.4698 bits (158), Expect = 6.586e-8 Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 0
Query: 71 KPKLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGC-YGDTNS---PSSLFRAVAMQLQGMKIP-------EAKNCPENPLGDLTRTLESIHRDNDSQNIFISSEHFDNLN-DEMVAEVTKL----FSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPL 217
+ ++ LHIG KT ++ +++ M +R+ LL+RG+M P C + DT P+SL R G ++P EA E G++ + D +S+EHF N D+ A + L ++F TV+ Y RR +L+S+Y++ K + L
Sbjct: 2 RKRVVLHIGTFKTATTAMQHYMYDNREALLERGVMYPRVCSFRDTGHVVLPASLLRKC-----GRRVPFWLDVDREADYYWERVAGEIAAS--------DCHTAVLSTEHFSNFGQDDCAASLAPLAREYLADFDVTVLCYLRRPDHYLLSWYNQVVKMGEAL 151
BLAST of EWM23115.1 vs. NCBI_GenBank
Match: gi|495553486|ref|WP_008278065.1| (hypothetical protein [Cyanothece sp. CCY0110] >gi|126618087|gb|EAZ88854.1| hypothetical protein CY0110_02832 [Cyanothece sp. CCY0110]) HSP 1 Score: 63.929 bits (154), Expect = 1.682e-7 Identity = 53/229 (23.14%), Postives = 101/229 (44.10%), Query Frame = 0
Query: 63 IALAQVKKKPKLFLHIGAHKTGSSYIKYQMMRSRDFLLQRGIMLPMGCYGDTNSPSSLFRAVAMQLQGMKIPEAKNCPENPL--------GDLTRTLESIHRDNDSQNIFISSEHFDNLNDEMVAEVTKLFSNFQTTVVLYYRRKQEHLVSYYSEFAKRADPLKSPLHLSDFLWNVMAEVDPEADVSGPLPSVPTANGRNHIHGVCYKRVLETYGRHFGPENMVVVHYN 283
I+ ++ +P ++LHIG KTG++ I+ + + + LL+ GI+ P+ S + + L I E ++ N + D+ + +E + I ISSEHF+ LN + + + K SN++ ++++ R++ E+ SYY + K A H + N +A+ E + Y + L+ + FG EN++V +N
Sbjct: 2 ISTNYMRNQPLIYLHIGTFKTGTTSIQSFLSKKMNILLKEGILYPLS------SRTKKYPNAHHNLASELIKENRSYLPNEMYEMNAGIWKDVIKEIEEF----KGKKIIISSEHFNRLNIKEIEMIRKHLSNYEVKIIVFLRKQDEYFKSYYCQDVKIA-------HYWGDIRNYIAKYKNEGN---------------------YYQKLKPWKETFGQENIIVRLFN 192 The following BLAST results are available for this feature:
BLAST of EWM23115.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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