rna7579, rna7579 (mRNA) Nannochloropsis gaditana

Overview
Namerna7579
Unique Namerna7579
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length351
Alignment locationCM002472.1:291160..292283 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100316g5.2361.mrna
Orig protein idgnl|cribi|Naga_100316g5.2361
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:291160..292283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100316g5gene7336Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7579rna7579-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23118.1cds7559Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7579 ID=rna7579|Name=rna7579|organism=Nannochloropsis gaditana|type=mRNA|length=351bp
ATGGAGAAGAAAGGAAAAGGACAGACGGAGGAAAAATGGATGGCAATGCA
GGAGGACGAGGAGGCACGGCTTGCCGCATCGTTCTTCGTGCAAGACGATG
CGCGCCGGGAAGACAACGAGGACAGCGGCGAGCAGGAGCACACGGCGACG
GCGGGCGATATAGGTGGTGGGGCTGATGGGGCTTGCGCGGGAGTGTATGG
GGAAGGGGAAGAGGTGGAGCAGGAGCAGGAACAGGAACAGAAGCACGTAA
TGTTGCTGCAGCTGGTGGGGGGGGCGGGGCGCAGGGTGGGGGAAAGGGGA
TGGGGAGGAGCAGGAGGAGGAGATTCTTGGCTACTGCGAGACGGCCAATG
A
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protein sequence of rna7579

>rna7579-protein ID=rna7579-protein|Name=rna7579|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MRGGGAPLPVPPPPQQQSHHLAQVVESHGAGSKKGNSGTYKTIEEVKCLN
FVILTHSMGRVFNNVGPDLKETKENKAVGVERPRYDLDFRHSVECFRSFD
IAFEKDEVMTKAQRSVEALASAVYYMCSYVPTIGSRYATLPLTLAELGVF
YIRADSPIAQPILRDPSRY
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mRNA from alignment at CM002472.1:291160..292283-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7579 ID=rna7579|Name=rna7579|organism=Nannochloropsis gaditana|type=mRNA|length=1124bp|location=Sequence derived from alignment at CM002472.1:291160..292283- (Nannochloropsis gaditana)
ATGCGTCTAATGTGGCCAGGAAAAGCCAATGAACTAGTCTAACGAATCAA
GATATCTCAAGGAAGTGATAAAGGCCAACAAAATTAATGCGCCCCGCTCG
CTCTTCACTCTCCTCTTAGCCCGTCCATCCAATCGTACATGCGAACTACC
TACTCAAAGCACTATACACAGATAATATTATGATGGGACAGAGAGGGCAA
TAAAGCTTGCACGAGAGGCGACGGCGGGCCTCCATCCCTTTTCGTCGTCG
CTTCTATCGTCGTCAGGAGGAGGAGGAGCACCACTCCCAGTCCCACCACC
ACCGCAGCAGCAGTCCCATCATCTGGCGCAGGTCGTGGAGAGCCACGGAG
CGGGGTCGAAGAAGGGGAATTCAGGCACCTACAAGACGATTGAGGAAGTC
AAGTGCCTCAACTTCGTGATCCTGACGCATTCGATGGGGCGTGTGTTTAA
CAACGTGGGCCCCGATCTGGTGCGAGATTAGAAGCGGTGGCAGGAGCTGG
AGCTAAAGGAGGAGGGCCTGTGCAGGGCAAGAAAGCAACGGACACAAAGA
AATGGAGGGCCACATCGCGCTGACCATTGACGACGTTCACATTCTGCGCC
CCCATTGATCAGTATGCGGTTATACGCCTGTGCGGCGGCATCACCTTCCG
CGTGATGACCAAGCCGTCTGTCACGGCGCGGGGGTTGGTGATGCTGGATG
ATGAGGACGATGGCGCGGGCGGCGACGGCGGCGGAGGAGAGGTTGGAGGC
GATATCTTCAGGCGCTGGTGATGGTTGGCAACCGAAGGATGTTTCGCTGA
ACCCACTTGCCTGCTCCGAAGAAGGAGACGAAGGAGAACAAGGCCGTGGG
GGTGGAACGGCCACGGTATGATCTGGATTTTCGACACAGCGTGGAGTGCT
TCCGGTCGTTTGACATTGCCTTCGAGAAGGATGAGGTCATGACGAAAGCA
CAGCGGTCCGTGGAGGCGCTGGCGTCCGCGGTGTACTACATGTGCTCCTA
CGTCCCCACCATCGGCAGCCGCTACGCCACATTGCCTCTCACGCTGGCGG
AGCTGGGCGTCTTTTACATACGTGCAGACAGCCCGATCGCTCAGCCCATC
CTCCGTGACCCCTCGCGGTACTAG
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Coding sequence (CDS) from alignment at CM002472.1:291160..292283-

>rna7579 ID=rna7579|Name=rna7579|organism=Nannochloropsis gaditana|type=CDS|length=1530bp|location=Sequence derived from alignment at CM002472.1:291160..292283- (Nannochloropsis gaditana)
AAGGAGACGAAGGAGAACAAGGCCGTGGGGGTGGAACGGCCACGGTATGA
TCTGGATTTTCGACACAGCGTGGAGTGCTTCCGGTCGTTTGACATTGCCT
TCGAGAAGGATGAGGTCATGACGAAAGCACAGCGGTCCGTGGAGGCGCTG
GCGTCCGCGGTGTACTACATGTGCTCCTACGTCCCCACCATCGGCAGCCG
CTACGCCACATTGCCTCTCACGCTGGCGGAGCTGGGCGTCTTTTACATAC
GTGCAGACAGCCCGATCGCTCAGCCCATCCTCCGTGACCCCTCGCGGTAC
TAGGAGGAGGAGGAGCACCACTCCCAGTCCCACCACCACCGCAGCAGCAG
TCCCATCATCTGGCGCAGGTCGTGGAGAGCCACGGAGCGGGGTCGAAGAA
GGGGAATTCAGGCACCTACAAGACGATTGAGGAAGTCAAGTGCCTCAACT
TCGTGATCCTGACGCATTCGATGGGGCGTGTGTTTAACAACGTGGGCCCC
GATCTGATGCAAGGAGACGAAGGAGAACAAGGCCGTGGGGGTGGAACGGC
CACGGTATGATCTGGATTTTCGACACAGCGTGGAGTGCTTCCGGTCGTTT
GACATTGCCTTCGAGAAGGATGAGGTCATGACGAAAGCACAGCGGTCCGT
GGAGGCGCTGGCGTCCGCGGTGTACTACATGTGCTCCTACGTCCCCACCA
TCGGCAGCCGCTACGCCACATTGCCTCTCACGCTGGCGGAGCTGGGCGTC
TTTTACATACGTGCAGACAGCCCGATCGCTCAGCCCATCCTCCGTGACCC
CTCGCGGTACTAGGAGGAGGAGGAGCACCACTCCCAGTCCCACCACCACC
GCAGCAGCAGTCCCATCATCTGGCGCAGGTCGTGGAGAGCCACGGAGCGG
GGTCGAAGAAGGGGAATTCAGGCACCTACAAGACGATTGAGGAAGTCAAG
TGCCTCAACTTCGTGATCCTGACGCATTCGATGGGGCGTGTGTTTAACAA
CGTGGGCCCCGATCTGATGCAAGGAGACGAAGGAGAACAAGGCCGTGGGG
GTGGAACGGCCACGGTATGATCTGGATTTTCGACACAGCGTGGAGTGCTT
CCGGTCGTTTGACATTGCCTTCGAGAAGGATGAGGTCATGACGAAAGCAC
AGCGGTCCGTGGAGGCGCTGGCGTCCGCGGTGTACTACATGTGCTCCTAC
GTCCCCACCATCGGCAGCCGCTACGCCACATTGCCTCTCACGCTGGCGGA
GCTGGGCGTCTTTTACATACGTGCAGACAGCCCGATCGCTCAGCCCATCC
TCCGTGACCCCTCGCGGTACTAGGAGGAGGAGGAGCACCACTCCCAGTCC
CACCACCACCGCAGCAGCAGTCCCATCATCTGGCGCAGGTCGTGGAGAGC
CACGGAGCGGGGTCGAAGAAGGGGAATTCAGGCACCTACAAGACGATTGA
GGAAGTCAAGTGCCTCAACTTCGTGATCCTGACGCATTCGATGGGGCGTG
TGTTTAACAACGTGGGCCCCGATCTGATGC
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Synonyms
Publications