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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100035g18.3392.mrna |
| Orig protein id | gnl|cribi|Naga_100035g18.3392 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:349656..352628 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna756 ID=rna756|Name=rna756|organism=Nannochloropsis gaditana|type=mRNA|length=3077bp
CGCAAGGCGCGTGTCATTTGCTTTTCGCTACTGTGTGAAGGTTTTGCAGT
GTCTGACGGGTAGCGTGAATTTTGTCATTCAACCAACTGACAGGAGACAG
ACAGCGAAAGAGCGTTCAAAAAGTATGGCTCACGCAGCAAAGCTGCCCAC
ACACAGTAGTGAACACGTTATGATGCAGCATCACGGTCAATTGGAGCATG
GACGTGAATCACAGCACGCGCGACAACAGCCAATGGTGGAGCGAGAGGGG
CGTTCAGTGGCACGTTTGCCTCTGCCCCCCCATCCACATTACCAACCAGT
CAAGAGTCACCACCACCTGCCTCCCTTTCCACCTCCACCACATTTCGGGT
TTCCGGCACCTCACCCTTTGGCCGCCCATCACCACGTGCCATTCCATTCT
CCCCGAGGGGAGCTTCAGCACAGTCGTCATTCCAAACCTCTGCCATTCGC
GTTACCTACGGAGGGCCTCAAGAGCGAGATGGAGGACGAAAAGGATGTCT
TGAGCGGGCGAAGCAATCCCCACGACCACCATGCCGTGGTCAAGCATGAA
GACGGGAGGTTGTATTTGGGGTGCAAGAAAGAGGGATGCAACGGCATCCT
CTTAGTTGAGCCCACGACTCATCACGGAGCACCGTACCAATGCCCGCGCT
GTCTGAACAAGCAGAAATACTGCCAAGATTGTCAGCAGCTGTACATCAAC
TTTAGGCGCCATCGGACATTGGGGCACGAGTTGTACGAATTCCAGCGGAA
GCGTCAGGTTTTGGTACGTAACATCCATGGTCTCTTTGTTCCCGGCAACC
AGAGCAAGAAAGGCAACTTAGTCACCGCCCCAGGCAGCAATAGCAGCAGC
AGTGTGACGAGCGCCTCTCCCGCTGGTGCTTCCATCAGCGGAGGGGGGCG
ACAGTCCCAGAAACAAAAACAGGCGGCGGCGACGATGGCGGCGGCAGCCG
CTGCTGCCGCCGTGGCCACTGCTGCATCAGAGGGGGAGGAAGCCTTGTCC
ACAGTCGGTCTGGACAGGTGTCGATCGCGGAGAGGGCGGCACGCGTGGGT
GCAAGGGTGCGATGAGATTGGTTTGGAGGAGATGGGGGAGGTGGAGGCGG
GTTTGGGGAAGGGGCAGGCGTCGGCGGAAGAGGAGGAGGTGGAAATCCAC
TCACCCGCCGGTGCCGTCTCTGGCACGCGAAGACATGATGGAGGGAGGCT
TCCTGCGCCACCCGAGGTGGCGGAGGAGCTCGACGATGCTTCAGATATTC
TTGTCAAACTTATGCAAGGCAGCAGCAACAAGCGGAGCAAGTTATCCGCG
GGCCCTGGGAGCAGGAGTCCGAAAATACAGGCACATGGTGGCCACGGCGG
TGTGGACCCCAAGCGCACAGGTGCAGAGCGTGAGGATGGCGGAAGCAGTG
GGTCACGGCCCGGACTCGACAAAAGCGAGGGAACGGACAGGGAGAGCACG
GGGCAAAAGACACCCGAGGCGAATCCAAGACCCATTGAGCCCTTGCCGGC
TGCGTCCTGTTTCCCGTTGACGGGACGTGCCGAACCGATTCAGCCCTTCG
CCCCAAAGCCTAAAAACACGCCACCCCCCGACCCTTCCGCCTCTCCTTGG
GCCCCGCCTCCCGCCTGGTTGTCCTCCAGCCTCACGGCTTCTGGCTCCAG
CTCGGCTCGCACAGGACCTGCCAAGATGCAGTACCCAGTGTGGAACAATG
TGCACCTCTCTTCCCATGATGGGACTTCCGCTGCGGTATCAGAGGCCGTA
GCAATGGGTGTGTCCTCGTTGCCTCCGTTGCCCTCCATCGAGCGCGTGGC
TAACATGAAGGAGGTAGACATGCCAGCACCGGCAGCGGCTGGATGTGAAC
AGGACTCAAAGTCTCAAACCTCCCCCGACACCTTTCCACGCTATCACCAG
GCGGAGGGGCACCGCACGGGGGACGATAAGACCGTGGGAGGTGGAGAAGG
AGGGGAAATGTCTGCCAAGGGTCAAGGGGAGAGCCAGAACGTGACCTTAC
ATGTCTAAGGGTACACGCCTGTAGGGATAAGATTACATGGAAGGCATGAA
CGCAAGACAAAGGAGAGCGCGAGGCACACAAGACTGGGTCGAAGGATTAA
CAGTACATGACTTTTGCCCCACGGTCGTAACGGCGGGGTTCCAAATATAC
GGAGATACGACGCCCGTATGTGGGTTCGAGCCCCCCGATTGTAACAAACA
GGGGGAAGATGGAATGTTACTTAATAATATTCATGAGAGTAGGGGTTATT
CAGCAGGTGTCGTGGGCTTCTCGTCAAATACTCGGCCGCGCCATAAGTAC
GCCCCAGTAGGGCCGAGAAGGACGGAGAGGCCATTATGGAAAGCAGAAAA
GTTTACGGGAAAATTAAAAAGCCTTGGACATGTCGAGCCCTTTGTTTGAA
AATGTGGGCGTGCAGAGAGAAAAGGAATGAAGGGAAAGTTGTGTGAATAA
AGTGTCGGAAAGAGACCAATTTTGAAGCTTAGATAAGGCGTAAGGATTTT
CGCGAGCCTTGCAGACAGGAAATGGAAAGATGGAGCGCTCCTAAAAAGGG
TTTGGTGGTGTATGTTATTACCAGAGGAGGATATGGCTGGAAAAACTGCC
TATGGAATAGGAAGCGCAAGGCGAAAGACTTCCATTGGCTGATTTTAGAC
AGAGAAAGACCCGTATATGTGCGTGAAAGATACTACACTGCCCTGCGCTA
CAATATCTTGATTTGCGTAGGAAAAGAGAGCGTGATGATGGGTTGTAAAG
CAAAAGCGAATAGAACAGCCCAAACAGCCCATTAAAATTACGCCTGTACA
AACAAGAAAGCAGGAAGAATCGGAGTGGAAGCTCCCTTTGTTGAGATCCT
GGGAATGAGAGATCGGCCGCGTCGTTGGACAGCATTTCTCGAAACCATCT
CTCTCTTTGCTCTATCGAGCGCCAGGTCTTGAATTCCGGCGATAAAAATA
AGATATTGAATAAATCCCAAAGAAAGTTTGTAAGGAGATCCGACCAGATC
CCAGTTACCTCAAGTGCCGCCCATGCTCATCACGTACATAAAGGAACAAG
ACGAGTATCCTCGATCGGCGCTTTCGG back to topprotein sequence of rna756 >rna756-protein ID=rna756-protein|Name=rna756|organism=Nannochloropsis gaditana|type=polypeptide|length=918bp
MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARK
DQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWAL
ALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQ
YMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNA
RAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDV
GNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAG
HCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKP
FIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIP
AGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVP
LTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHP
RHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRV
SETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIEL
PDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVR
NTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDY
EHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWIL
RWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTAL
TARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLW
RDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGL
QRVTKYLHKHDLNAYGGL back to topmRNA from alignment at CM002456.1:349656..352628- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna756 ID=rna756|Name=rna756|organism=Nannochloropsis gaditana|type=mRNA|length=2973bp|location=Sequence derived from alignment at CM002456.1:349656..352628- (Nannochloropsis gaditana)
ACACACCCACCAACGATATTCATCCTGATATGACCTGCAAATTTTAATCA
TTCTTTTTAAACATAGTATGCCTTCATCGTTATTAACTAGGATTAAATCC
GGGGGTTGGGAACTTTTATCTAATAACCTCCTCCCACCCTCGGGGCTAGG
CTACCCTATTGAAGCCTCGAAATGCTTACAGGTGATTATGGAGGCAAAAA
ATAAGAACGCACGGAAGGACCAATGTGCTAAGTCAATGAGTGTGAACAAA
AATGCGGAGATCCATTCCCACCGTGACCTTTCTGTCCTCCACGCCGCCCT
GGAGCAGCAATATGGCGACGGTATCATCCCTTTGTCCGCATTAAGTATGC
TGAGACGATGGGCACTCGCGTTAGGGCGTCCATGTAGCAAGCATATCAAC
AATTTGTCCAAGAGAGTTGCGCACGTGCTGAAACAAACCTCACACTCTCC
AAGCCTACGTGCCGAGATCGAGCAAGAGCTACTTTATGAGGTGGAAGCTC
AAGACAGTCCTTTGCAGTACATGTACAATATTCCAAAAGTCTCATTCACC
TCCCAGCCCGAGCAAAACTTCAAGATATTATGTTGTAATAGAAACAATGA
CCTAAGGCATTTCTCCGATTCCCAGCACTACACAAGATCACGAGCATTTT
ACGCACGGCAGAATGCAAGGGCCTTCGAGACCACTGTGCCGTGTGGGGTC
ACAACCAATGCATTCATCGTCGATGCCTACGCACGCTGCATTCAAGCTTA
CCTTGCAGACATCCGTCATTGCTACGACAATATCGACGTCTCTGACAGAG
CACATATCATGGATGTCGGGAACCGCACGTGCCACCGTGGAGAAACGGCC
GAACAAAAGCATGGGCCGGGTGATGTGAAGACGAAGAGGTGTACAACTGC
CTCAAGTGCCAAGACTGATGACTCAAGAAGCCGGAACAAAGTTTACGTCA
TTGAGCTTGCTGCCGGTCACTGCCTTTTTGGCTACTTACTGGCTAAACGT
CTCCACCAAGCCCAGGAAGAGGGCGCTGTGCCTTCTTCGTGGTCGATCTG
TATTCTCCTCACTGATTTTAATCATGCAATACTTAAAAGCCGCATGGAGA
TGCCATGGATGAAGCCCTTCATTGCAGCGGGTCTCGTGGAGTTTGCGGTG
CTGGATGCCGCCTCAGCTGGTGCGAGCGGGCCGACGGAACAGGAAGGGGA
AGAAGGGAGGGAGAGGGTAGAACCCGGATCTCTTTTGCTGATGGGTGAGA
CCAAGCGGTGGATACCCGCAGGAAGCTTGCTTGGACCTGTCTTCATAATT
GGTAATTATGCCCTGGATTCCTTCCCCGTGGACGTGTTCATGTCCGGGCA
GACAGGAGTATTGGACGAGGTGTGCGCGGAAGGCGGGGGCGGGCGGCTGC
GGCTCGTGCCTGTGCCTTTGACAGCCACGAGCGAAAGGGTAGCGGATGGA
TATCCCTACCAACCACTTGTTCGCGCCCTGGTCGAGGAAAGGGAGGGAGG
AGTGCTCCATATGATCAACGTTGGGTTTATTCGAATACTAGAGCAAATTC
GCAGCTTGTTACACCCGCGGCATAAAGGGCACATCGCTGCTTTGGCGGCG
GATGCGACCTTCCAATTCGACGATCCTGTATGGCGCGTGGAGCAGGCAGG
GTCGGAAGGTTCGAAGGTCTTGGATGGAATAGAAGAAGGAGACAGGAGGG
GATTGGCTGGGCGGGTGAGCGAGACCATAGTACAGAAAACCCGAGGAAGA
GTTCACGAGGTGACAAAATGGCAGGATGGAGAAAAGGCGACACAGCATCG
TGTGGCACCTTCTTCTGACTACGGCGGGGACCGGAAGACCTTACAGCGGC
CTCCGTCCATCGAACTGCCCGACATAAGCCCAGGATCGGGCAGCGGGTGT
TTCGCTCTGGCGGTGGATCCTCAGACCATCGTGTCCGCCGTGCTGTGGAC
GTTCCAAGGCCTGGGGGAGGGGGACGGGAGGCGGGGAGAGGAAAGGGTCG
AGTGGTTGGCAGTGCGCAACACGCTCCTAGAAGGCGGGTTAGCCGTGACT
CTGGTGGCAACGAAGGCAGCAGAGGAAGACGAGGTGCATACCACGGGAAA
TGTAGCCTTGTCCCGAACAAGAGAGGCGTTTTGGAGGCATCTTTGCCTGC
AAAATCCCACCGACTATGAACACATTCAAGGGCTTATGCTTGAGGAGCAC
GATGCGTTAAAAAAGGATGGCCGCGAATGCCGAAGCCTTGTGTCATCCCT
GGGACTGCAAGGGATGCTTGCCTTGCTGCGGTGGTCTGGCTACGACTTCG
ACTTGTTTTGGATCCTTCGGTGGTATCTCCGAGATGCCATGCTGCAACAT
TGCTCTCTTGATCGTCAGTTGGGTGCGGGGCGCTTATTCACAGACGAAAC
CATGAAGAAGTGCGTGCTTGTCGTTGCGGATGTTGCACTTCGTTGCCTTT
TTAACTGTACGGCTTTGACTGCGCGAGCGTGGGCCTTGTCGCGGTATCGG
GGGCTGCAATTTCTCTACGCTTTAGGCTGTTACAGGGAGGCAGTGGAGTT
TTTTATGTACCGTTGCAGAGGGGATATCTCACCCTTGAAACTTTCGACCA
GCTCGATCGATTTATGGAGAGATAAATTCTGCGATGAATTCGGAAGCGCG
GCTGAGGCCTTTCTGATCGCCCTTTGCTTGGATAAGCTACCTTGTACAAG
TAAAAGTGTTCGTCAGCTTTTGCTGTGTACCACGCACGGAGCAAGGTTTC
GGGATAGTAAAGGACTACAACGAGTCACCAAATACCTACACAAGCATGAT
CTTAATGCTTACGGCGGCTTGTGAAATAAGTACAGCAAGAAAGCGCAAGA
GTACGTGTTGGTAAATTACAAAGTGAAAATAACGAAAAAGAGCATTTTTA
CCATCCAAAGATTGGAACAAGATACACAAAAATAGAACCTATCAAAGAAA
AATGTATTAGTAGGAGTAAAATA back to topCoding sequence (CDS) from alignment at CM002456.1:349656..352628- >rna756 ID=rna756|Name=rna756|organism=Nannochloropsis gaditana|type=CDS|length=2757bp|location=Sequence derived from alignment at CM002456.1:349656..352628- (Nannochloropsis gaditana)
ATGCCTTCATCGTTATTAACTAGGATTAAATCCGGGGGTTGGGAACTTTT
ATCTAATAACCTCCTCCCACCCTCGGGGCTAGGCTACCCTATTGAAGCCT
CGAAATGCTTACAGGTGATTATGGAGGCAAAAAATAAGAACGCACGGAAG
GACCAATGTGCTAAGTCAATGAGTGTGAACAAAAATGCGGAGATCCATTC
CCACCGTGACCTTTCTGTCCTCCACGCCGCCCTGGAGCAGCAATATGGCG
ACGGTATCATCCCTTTGTCCGCATTAAGTATGCTGAGACGATGGGCACTC
GCGTTAGGGCGTCCATGTAGCAAGCATATCAACAATTTGTCCAAGAGAGT
TGCGCACGTGCTGAAACAAACCTCACACTCTCCAAGCCTACGTGCCGAGA
TCGAGCAAGAGCTACTTTATGAGGTGGAAGCTCAAGACAGTCCTTTGCAG
TACATGTACAATATTCCAAAAGTCTCATTCACCTCCCAGCCCGAGCAAAA
CTTCAAGATATTATGTTGTAATAGAAACAATGACCTAAGGCATTTCTCCG
ATTCCCAGCACTACACAAGATCACGAGCATTTTACGCACGGCAGAATGCA
AGGGCCTTCGAGACCACTGTGCCGTGTGGGGTCACAACCAATGCATTCAT
CGTCGATGCCTACGCACGCTGCATTCAAGCTTACCTTGCAGACATCCGTC
ATTGCTACGACAATATCGACGTCTCTGACAGAGCACATATCATGGATGTC
GGGAACCGCACGTGCCACCGTGGAGAAACGGCCGAACAAAAGCATGGGCC
GGGTGATGTGAAGACGAAGAGGTGTACAACTGCCTCAAGTGCCAAGACTG
ATGACTCAAGAAGCCGGAACAAAGTTTACGTCATTGAGCTTGCTGCCGGT
CACTGCCTTTTTGGCTACTTACTGGCTAAACGTCTCCACCAAGCCCAGGA
AGAGGGCGCTGTGCCTTCTTCGTGGTCGATCTGTATTCTCCTCACTGATT
TTAATCATGCAATACTTAAAAGCCGCATGGAGATGCCATGGATGAAGCCC
TTCATTGCAGCGGGTCTCGTGGAGTTTGCGGTGCTGGATGCCGCCTCAGC
TGGTGCGAGCGGGCCGACGGAACAGGAAGGGGAAGAAGGGAGGGAGAGGG
TAGAACCCGGATCTCTTTTGCTGATGGGTGAGACCAAGCGGTGGATACCC
GCAGGAAGCTTGCTTGGACCTGTCTTCATAATTGGTAATTATGCCCTGGA
TTCCTTCCCCGTGGACGTGTTCATGTCCGGGCAGACAGGAGTATTGGACG
AGGTGTGCGCGGAAGGCGGGGGCGGGCGGCTGCGGCTCGTGCCTGTGCCT
TTGACAGCCACGAGCGAAAGGGTAGCGGATGGATATCCCTACCAACCACT
TGTTCGCGCCCTGGTCGAGGAAAGGGAGGGAGGAGTGCTCCATATGATCA
ACGTTGGGTTTATTCGAATACTAGAGCAAATTCGCAGCTTGTTACACCCG
CGGCATAAAGGGCACATCGCTGCTTTGGCGGCGGATGCGACCTTCCAATT
CGACGATCCTGTATGGCGCGTGGAGCAGGCAGGGTCGGAAGGTTCGAAGG
TCTTGGATGGAATAGAAGAAGGAGACAGGAGGGGATTGGCTGGGCGGGTG
AGCGAGACCATAGTACAGAAAACCCGAGGAAGAGTTCACGAGGTGACAAA
ATGGCAGGATGGAGAAAAGGCGACACAGCATCGTGTGGCACCTTCTTCTG
ACTACGGCGGGGACCGGAAGACCTTACAGCGGCCTCCGTCCATCGAACTG
CCCGACATAAGCCCAGGATCGGGCAGCGGGTGTTTCGCTCTGGCGGTGGA
TCCTCAGACCATCGTGTCCGCCGTGCTGTGGACGTTCCAAGGCCTGGGGG
AGGGGGACGGGAGGCGGGGAGAGGAAAGGGTCGAGTGGTTGGCAGTGCGC
AACACGCTCCTAGAAGGCGGGTTAGCCGTGACTCTGGTGGCAACGAAGGC
AGCAGAGGAAGACGAGGTGCATACCACGGGAAATGTAGCCTTGTCCCGAA
CAAGAGAGGCGTTTTGGAGGCATCTTTGCCTGCAAAATCCCACCGACTAT
GAACACATTCAAGGGCTTATGCTTGAGGAGCACGATGCGTTAAAAAAGGA
TGGCCGCGAATGCCGAAGCCTTGTGTCATCCCTGGGACTGCAAGGGATGC
TTGCCTTGCTGCGGTGGTCTGGCTACGACTTCGACTTGTTTTGGATCCTT
CGGTGGTATCTCCGAGATGCCATGCTGCAACATTGCTCTCTTGATCGTCA
GTTGGGTGCGGGGCGCTTATTCACAGACGAAACCATGAAGAAGTGCGTGC
TTGTCGTTGCGGATGTTGCACTTCGTTGCCTTTTTAACTGTACGGCTTTG
ACTGCGCGAGCGTGGGCCTTGTCGCGGTATCGGGGGCTGCAATTTCTCTA
CGCTTTAGGCTGTTACAGGGAGGCAGTGGAGTTTTTTATGTACCGTTGCA
GAGGGGATATCTCACCCTTGAAACTTTCGACCAGCTCGATCGATTTATGG
AGAGATAAATTCTGCGATGAATTCGGAAGCGCGGCTGAGGCCTTTCTGAT
CGCCCTTTGCTTGGATAAGCTACCTTGTACAAGTAAAAGTGTTCGTCAGC
TTTTGCTGTGTACCACGCACGGAGCAAGGTTTCGGGATAGTAAAGGACTA
CAACGAGTCACCAAATACCTACACAAGCATGATCTTAATGCTTACGGCGG
CTTGTGA back to top
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