EWM29928.1, cds756 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29928.1 vs. NCBI_GenBank
Match: gi|585112511|gb|EWM29928.1| (hypothetical protein Naga_100035g18 [Nannochloropsis gaditana]) HSP 1 Score: 1905.18 bits (4934), Expect = 0.000e+0 Identity = 918/918 (100.00%), Postives = 918/918 (100.00%), Query Frame = 0
Query: 1 MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARKDQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWALALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQYMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHPRHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRVSETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIELPDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVRNTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDYEHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWILRWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTALTARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLWRDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGLQRVTKYLHKHDLNAYGGL 918
MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARKDQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWALALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQYMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHPRHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRVSETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIELPDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVRNTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDYEHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWILRWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTALTARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLWRDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGLQRVTKYLHKHDLNAYGGL
Sbjct: 1 MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARKDQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWALALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQYMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHPRHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRVSETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIELPDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVRNTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDYEHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWILRWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTALTARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLWRDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGLQRVTKYLHKHDLNAYGGL 918
BLAST of EWM29928.1 vs. NCBI_GenBank
Match: gi|1173937333|gb|OQR88155.1| (hypothetical protein ACHHYP_07303 [Achlya hypogyna]) HSP 1 Score: 73.1738 bits (178), Expect = 1.770e-9 Identity = 90/337 (26.71%), Postives = 129/337 (38.28%), Query Frame = 0
Query: 130 LRAEIEQELLYEVEAQDSP---LQYMYN----IPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETT-VPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAA--GLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSE 456
LRA + ELL P + +++N P P Q F+ + L S S + + FY A+ VP GV+++ FI +AYAR + +L D CH Q H A++ + YVIE +G C FG A+ L + ++ CI+LTD + A+L SR+ + + A G ++FAVLD A G+ RV L A P+F +GNY LDS P DVF+ +G L V + GGG PVP+ TS
Sbjct: 197 LRANVRTELLRVFRWPHVPEAIVTFLHNDTVFQPTEKPAGPPTQLFED-APPSTDGLSPVSVSPVWASQKDFYRAHGLAAWSANLVPYGVSSSMFIAEAYARVVLQFLLD-----------------------CH-----SQGH-----------LAAAGGIN-------AYVIEGGSGCCKFGLAFARHLLGLLAGLELLAAVRPCIVLTDLSAAVLDSRLATDDFQSLLGAFPGQLDFAVLDVEDVIA-------GKGVHLRVANAPL-----------APGPATPLFFVGNYFLDSLPTDVFLVEPSG-LSPVLTDDGGGSFAPSPVPVDPTSH 467 The following BLAST results are available for this feature:
BLAST of EWM29928.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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