EWM29928.1, cds756 (CDS) Nannochloropsis gaditana

Overview
NameEWM29928.1
Unique Namecds756
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:349805..352561 -

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Properties
Property NameValue
Protein idEWM29928.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100035g18.3392.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:349805..352561 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29928.1 vs. NCBI_GenBank
Match: gi|585112511|gb|EWM29928.1| (hypothetical protein Naga_100035g18 [Nannochloropsis gaditana])

HSP 1 Score: 1905.18 bits (4934), Expect = 0.000e+0
Identity = 918/918 (100.00%), Postives = 918/918 (100.00%), Query Frame = 0
Query:    1 MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARKDQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWALALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQYMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHPRHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRVSETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIELPDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVRNTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDYEHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWILRWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTALTARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLWRDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGLQRVTKYLHKHDLNAYGGL 918
            MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARKDQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWALALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQYMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHPRHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRVSETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIELPDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVRNTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDYEHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWILRWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTALTARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLWRDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGLQRVTKYLHKHDLNAYGGL
Sbjct:    1 MPSSLLTRIKSGGWELLSNNLLPPSGLGYPIEASKCLQVIMEAKNKNARKDQCAKSMSVNKNAEIHSHRDLSVLHAALEQQYGDGIIPLSALSMLRRWALALGRPCSKHINNLSKRVAHVLKQTSHSPSLRAEIEQELLYEVEAQDSPLQYMYNIPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETTVPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAAGLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSERVADGYPYQPLVRALVEEREGGVLHMINVGFIRILEQIRSLLHPRHKGHIAALAADATFQFDDPVWRVEQAGSEGSKVLDGIEEGDRRGLAGRVSETIVQKTRGRVHEVTKWQDGEKATQHRVAPSSDYGGDRKTLQRPPSIELPDISPGSGSGCFALAVDPQTIVSAVLWTFQGLGEGDGRRGEERVEWLAVRNTLLEGGLAVTLVATKAAEEDEVHTTGNVALSRTREAFWRHLCLQNPTDYEHIQGLMLEEHDALKKDGRECRSLVSSLGLQGMLALLRWSGYDFDLFWILRWYLRDAMLQHCSLDRQLGAGRLFTDETMKKCVLVVADVALRCLFNCTALTARAWALSRYRGLQFLYALGCYREAVEFFMYRCRGDISPLKLSTSSIDLWRDKFCDEFGSAAEAFLIALCLDKLPCTSKSVRQLLLCTTHGARFRDSKGLQRVTKYLHKHDLNAYGGL 918          
BLAST of EWM29928.1 vs. NCBI_GenBank
Match: gi|1173937333|gb|OQR88155.1| (hypothetical protein ACHHYP_07303 [Achlya hypogyna])

HSP 1 Score: 73.1738 bits (178), Expect = 1.770e-9
Identity = 90/337 (26.71%), Postives = 129/337 (38.28%), Query Frame = 0
Query:  130 LRAEIEQELLYEVEAQDSP---LQYMYN----IPKVSFTSQPEQNFKILCCNRNNDLRHFSDSQHYTRSRAFYARQNARAFETT-VPCGVTTNAFIVDAYARCIQAYLADIRHCYDNIDVSDRAHIMDVGNRTCHRGETAEQKHGPGDVKTKRCTTASSAKTDDSRSRNKVYVIELAAGHCLFGYLLAKRLHQAQEEGAVPSSWSICILLTDFNHAILKSRMEMPWMKPFIAA--GLVEFAVLDAASAGASGPTEQEGEEGRERVEPGSLLLMGETKRWIPAGSLLGPVFIIGNYALDSFPVDVFMSGQTGVLDEVCAEGGGGRLRLVPVPLTATSE 456
            LRA +  ELL        P   + +++N     P       P Q F+       + L   S S  +   + FY      A+    VP GV+++ FI +AYAR +  +L D                       CH      Q H            A++   +        YVIE  +G C FG   A+ L        + ++   CI+LTD + A+L SR+     +  + A  G ++FAVLD     A       G+    RV    L           A     P+F +GNY LDS P DVF+   +G L  V  + GGG     PVP+  TS 
Sbjct:  197 LRANVRTELLRVFRWPHVPEAIVTFLHNDTVFQPTEKPAGPPTQLFED-APPSTDGLSPVSVSPVWASQKDFYRAHGLAAWSANLVPYGVSSSMFIAEAYARVVLQFLLD-----------------------CH-----SQGH-----------LAAAGGIN-------AYVIEGGSGCCKFGLAFARHLLGLLAGLELLAAVRPCIVLTDLSAAVLDSRLATDDFQSLLGAFPGQLDFAVLDVEDVIA-------GKGVHLRVANAPL-----------APGPATPLFFVGNYFLDSLPTDVFLVEPSG-LSPVLTDDGGGSFAPSPVPVDPTSH 467          
The following BLAST results are available for this feature:
BLAST of EWM29928.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112511|gb|EWM29928.1|0.000e+0100.00hypothetical protein Naga_100035g18 [Nannochlorops... [more]
gi|1173937333|gb|OQR88155.1|1.770e-926.71hypothetical protein ACHHYP_07303 [Achlya hypogyna... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna756rna756Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications