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Properties
Property Name | Value |
Product | protein phosphatase 2c-related protein |
Orig transcript id | gnl|cribi|Naga_100043g45.7258.mrna |
Orig protein id | gnl|cribi|Naga_100043g45.7258 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002472.1 | supercontig | CM002472.1:231628..233124 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7555 ID=rna7555|Name=rna7555|organism=Nannochloropsis gaditana|type=mRNA|length=741bp ATGCAGCTACAAGCTACAATGAATTCGCCGGCTGCAGCGCCCAAACCTGA TGTGCTGCCCTCGGTTCAACCTGTGGGGGGCGTTCCCATGTCCTATCCCC CCCCTGAAGAAGAATTTGCATTACAACACGAGCAAAATACAGAGATAGGT AAGGACCGTTCGATAAAGCCCAGCACGCCCAGCACGCCATCAAACAGAAC AGGAAAAAGTGCCACTGATGTCGGAAAACCAGTTGAAAAGCATGCTACGA AGAATCGGCATCAGCAGCTTCTTGACAAGATAAACAGACTGGAGGCGGCC TTACTCCAGGCCCAAAATCAAAACGCGACAAACGAACGATTAGCAACGCA ACATGCACAAAGGGCTTTGTTTGCGGAAAAGGATGTGTTGCAAATGAAGC GGGAGACGCTGACACGGACCTCTGAGTTGAAAGGACAAGGTGTGCACAGA CAGCGCCTTGAGAAAGAAACTAAACGATTACAAGCCGCACTTAAACAAGA CAAATCTACCCGAGAAACGAAGATGAGGCAATGTCAAATTGCCTTGGACC AAACGGAGCGAAGGGCTAGGCATCTGGAAAAGGAGAACGCTCAGTTGCGA GCAGCTCTTCAAAAACAGGGGGAGTTGTTGCAAGTACTCGATCGACAGGT GGAGCACGCGCAGGCCATGCAGCTCTTTTCTATCATGGAGGAAGATTTCG ACAATTTGGTCGTTGATCTGCGTCGCTCGGGACGGGAATGA back to topprotein sequence of rna7555 >rna7555-protein ID=rna7555-protein|Name=rna7555|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRSTKSSTNSNGISRT IQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPAS GTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDI VDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGAT AVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHK AEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTT IVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAG LLVQEAMRRGSSDNITCIVVLL back to topmRNA from alignment at CM002472.1:231628..233124- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7555 ID=rna7555|Name=rna7555|organism=Nannochloropsis gaditana|type=mRNA|length=1497bp|location=Sequence derived from alignment at CM002472.1:231628..233124- (Nannochloropsis gaditana) GGCTTTGCCAAAACAGGGGGATCATGCGCACTTTGTGTGACGTTGAGATA
GGGTTAGGACGACGTGACCACTGGTGTAACCTCTCACTAGACTCTTCTCT
GTTTTTATTCCCTCTATCACCTGCAGCACGTCAATCGAATTTGCGAGACA
TTGGCGACAAGGTTACGTCCCGCCGCACGGTCTTCGAGTCTGTGAAGAAA
GCGTGCCCCCACGATGACACCTGTCCTGGAGACCCAGAGTTGCATTTCTA
CGTTATCCGACCAAGTGCCTTCGAAGTGTCGTGCCCAGCCTGAGGTGGAG
TCCGGTGTTAAGGGCGACAGGAGTACGAAGTCCAGCACCAATAGCAACGG
CATCAGTCGAACAATTCAGGAGAGCGCCACTCCTTCTCTACCCCGGGAGA
CGTCAAGATCCGATGGAGCTTCGAGCCCCTTGGACTCATCGACGGCTTCC
TCCTTGGCTACCTCAGCGACGGCGGCCATTCAGTCAATTAAAGGCACCAT
TTACCCCGCGAGCGGCACCTTCAAGGGAGTGAGCGTGGCGGAAGAAATGA
ACCCGCTGCGGCGGAGCACCATGGAAGACGTGCACCGAGTCCTACCTGTC
TTTGATGGCGATGCATGTATGAGCTTCGTGGGCATCTACGATGGGCATGG
GGGGCGGGACATAGTGGATTTCCTTGCCACGGAGCTCGAAAAGAACGTGG
CGCGTGAGCTTAAAGTTGAAGACGGGGCCAGCGTGCCGGAGAGACTGGAG
AGGGCATATCTGTTGACGGACGTGCAATCTCGACAGGCGGAACTGATGGG
TTCCGGGGCGACCGCCGTAACGTGCCTGATCAAGGCCAGGAGGGAGGGCG
AGGGTGAGGGGGCGGGGGAGACCGTCCGAGAGATATACACTGCCAACGTA
GGGGACAGCCGGGCCGTGCTCTGTCACCAGGGGAAGGGTATGCGCTTGAC
ATACGACCACAAGGCAGAGGACAAGGGGGAGCAGGCTCGAATCGAGGCCG
CCGGGGGCTTTGTCTTGCGGAGCCGCGTCTTGGGCATCCTGGCCGTGACG
CGGAGCTTCGGAGACCATCGGATGAAGGACTACGTCATCGGGGTACCCTA
CACGTCCACCACCATCGTGGAGGACAGTACACCCGAGGAAAGCCCTTTCT
TGATTCTCGCCTGCGACGGGGTCTGGGACGTGCTCTCGGACGACGAGGCA
GTGGGGCTCGTGAGGGGGCAATGGGAGAGGGAGGGCCGGAGGCCGGAGGT
GGACGCGGCGGGCTTGCTAGTACAAGAGGCGATGCGAAGAGGCTCGTCGG
ACAACATAACTTGCATTGTGGTGCTCTTGTGAAGACGGATAGGAAGGAGG
GGGAGGGGGTTGAGGAAAGGAAAGGAGGGGAGTATGTCAAGAGCGCTTGC
CGCGCCATGGAGGAGGGACCGGGGCCTACCATAGCAAAGTCAATAAATAA
ACGAAAGGCTGCCTTTAACTACGAGAAGAGAAATCTCAGCAATGCCC back to topCoding sequence (CDS) from alignment at CM002472.1:231628..233124- >rna7555 ID=rna7555|Name=rna7555|organism=Nannochloropsis gaditana|type=CDS|length=1119bp|location=Sequence derived from alignment at CM002472.1:231628..233124- (Nannochloropsis gaditana) ATGACACCTGTCCTGGAGACCCAGAGTTGCATTTCTACGTTATCCGACCA AGTGCCTTCGAAGTGTCGTGCCCAGCCTGAGGTGGAGTCCGGTGTTAAGG GCGACAGGAGTACGAAGTCCAGCACCAATAGCAACGGCATCAGTCGAACA ATTCAGGAGAGCGCCACTCCTTCTCTACCCCGGGAGACGTCAAGATCCGA TGGAGCTTCGAGCCCCTTGGACTCATCGACGGCTTCCTCCTTGGCTACCT CAGCGACGGCGGCCATTCAGTCAATTAAAGGCACCATTTACCCCGCGAGC GGCACCTTCAAGGGAGTGAGCGTGGCGGAAGAAATGAACCCGCTGCGGCG GAGCACCATGGAAGACGTGCACCGAGTCCTACCTGTCTTTGATGGCGATG CATGTATGAGCTTCGTGGGCATCTACGATGGGCATGGGGGGCGGGACATA GTGGATTTCCTTGCCACGGAGCTCGAAAAGAACGTGGCGCGTGAGCTTAA AGTTGAAGACGGGGCCAGCGTGCCGGAGAGACTGGAGAGGGCATATCTGT TGACGGACGTGCAATCTCGACAGGCGGAACTGATGGGTTCCGGGGCGACC GCCGTAACGTGCCTGATCAAGGCCAGGAGGGAGGGCGAGGGTGAGGGGGC GGGGGAGACCGTCCGAGAGATATACACTGCCAACGTAGGGGACAGCCGGG CCGTGCTCTGTCACCAGGGGAAGGGTATGCGCTTGACATACGACCACAAG GCAGAGGACAAGGGGGAGCAGGCTCGAATCGAGGCCGCCGGGGGCTTTGT CTTGCGGAGCCGCGTCTTGGGCATCCTGGCCGTGACGCGGAGCTTCGGAG ACCATCGGATGAAGGACTACGTCATCGGGGTACCCTACACGTCCACCACC ATCGTGGAGGACAGTACACCCGAGGAAAGCCCTTTCTTGATTCTCGCCTG CGACGGGGTCTGGGACGTGCTCTCGGACGACGAGGCAGTGGGGCTCGTGA GGGGGCAATGGGAGAGGGAGGGCCGGAGGCCGGAGGTGGACGCGGCGGGC TTGCTAGTACAAGAGGCGATGCGAAGAGGCTCGTCGGACAACATAACTTG CATTGTGGTGCTCTTGTGA back to top
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