EWM23175.1, cds7537 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|585104056|gb|EWM23175.1| (protein phosphatase 2c-related protein [Nannochloropsis gaditana]) HSP 1 Score: 755.747 bits (1950), Expect = 0.000e+0 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query: 1 MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRSTKSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRSTKSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL
Sbjct: 1 MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRSTKSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|553183251|ref|XP_005853864.1| (protein phosphatase 2c-related protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295196|gb|EKU22495.1| protein phosphatase 2c-related protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 402.519 bits (1033), Expect = 4.746e-139 Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0
Query: 1 MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRSTKSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATA 201
MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRS KSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATA
Sbjct: 1 MTPVLETQSCISTLSDQVPSKCRAQPEVESGVKGDRSPKSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATA 201
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|298711281|emb|CBJ26526.1| (protein phosphatase 2C-like domain-containing protein [Ectocarpus siliculosus]) HSP 1 Score: 275.018 bits (702), Expect = 2.263e-87 Identity = 144/283 (50.88%), Postives = 190/283 (67.14%), Query Frame = 0
Query: 90 QSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
++ G I P + TF+ VS A+EMNP R++MED H + FDGD SF +YDGHGGR VDF+++ LE+ +A E++ ++ +S+ ER+ RAY LTD ++A ++ SGATAVTCL+ RE +G+ I+ AN+GDSRAVL GK RLTYDHKAED EQ R+ AAGGFVLR+RVLGILAV+RSFG+ MKD V VP+ S E S + FLILACDGVWDV +D++AV V E E D AG L++E++ RGS+DNIT ++V
Sbjct: 36 KATAGGIGP-TATFRCVSCADEMNPSWRNSMEDAHETVAHFDGDPSTSFFAVYDGHGGRGTVDFVSSRLEEILAEEMRADNTSSIQERITRAYGLTDCLCKEASVLTSGATAVTCLL---REQDGK------VTIHAANIGDSRAVLARGGKAERLTYDHKAEDAAEQERVNAAGGFVLRNRVLGILAVSRSFGNQGMKDLVTAVPHVS----ETSVCPDCTFLILACDGVWDVFTDNDAVSFVTQAME---TMAEADVAGALLRESLARGSTDNITVVIVFF 301
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|224000325|ref|XP_002289835.1| (hypothetical protein THAPSDRAFT_262201, partial [Thalassiosira pseudonana CCMP1335] >gi|220975043|gb|EED93372.1| hypothetical protein THAPSDRAFT_262201, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 241.506 bits (615), Expect = 1.856e-74 Identity = 137/291 (47.08%), Postives = 185/291 (63.57%), Query Frame = 0
Query: 106 VSVAEEMNPLRRSTMEDVHRVLP--VFDGDACMS--FVGIYDGHGGRDIVDFLATELEKNVARELKVEDGAS----VPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREI--YTANVGDSRAVLC-------------HQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTP-EESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
VS+AEEMNP RRSTMEDVH P ++ C S F+G+YDGHGGR IVD+L L +NV +E + + +S + + LERA+LLTD+QSR A SGAT C++ + G+G + V EI + AN GD+R VL K MRLT+DHK+ D E +RIE++GG ++R RVLG+LAV+RS GDH +K++VIG P+ S+T+V ++P + FLI+ACDG+WDV+ D EAV +VR E+ A +L+ EAMRRGS+DNIT IV L
Sbjct: 7 VSIAEEMNPTRRSTMEDVHVYHPPNSWNHPTCTSATFIGVYDGHGGRSIVDYLEDHLAENVGKENETNNNSSEGQLIQKALERAFLLTDIQSRIAGHTTSGATVACCVVIPKLAGDGS---KRVIEIGIHAANAGDARIVLSSGVARSTPNNNNNSNNKAMRLTHDHKSTDPTEISRIESSGGIMIRGRVLGVLAVSRSLGDHGLKEFVIGRPFLSSTVVRSASPFTDGEFLIVACDGLWDVMEDQEAVDMVRKYVEQ--------TAQILIDEAMRRGSADNITVIVHWL 286
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|1210524236|dbj|GAX16965.1| (protein phosphatase [Fistulifera solaris]) HSP 1 Score: 236.498 bits (602), Expect = 6.419e-72 Identity = 130/269 (48.33%), Postives = 177/269 (65.80%), Query Frame = 0
Query: 109 AEEMNPLRRSTMEDV---HRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEES--PFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
AE MNP R+TMEDV H DA ++F G+YDGHGGR+IV+FL L +VA+EL ED + + RL+RA+L+TD+ +R+A ++ SGAT TCL+K++ + EI AN GDSR VL H+G RLT DH+A D E ARIE AGGF+ R RVLGIL++TRS GDH +K +VIG P + ++ S+ +E+ LILACDGV+DVLSD++AV +V RE AA LV+EA+++GS+DN++ IV+ L
Sbjct: 57 AEAMNPAWRATMEDVSVIHAPGTWEAPDADLAFFGLYDGHGGREIVNFLEHGLSFHVAQELAFEDDSDIQTRLQRAFLMTDIHARRAGVLTSGATVATCLVKSQSQTPNR------VEIVAANAGDSRVVLFHEGVVTRLTEDHRASDLSEVARIEQAGGFLFRERVLGILSLTRSIGDHLLKRFVIGHPSVMSATLDLSSNKENERTLLILACDGVFDVLSDEQAVAVV-----RENASKGAGAARCLVEEALKKGSTDNVSAIVIWL 314
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|1210515738|dbj|GAX25261.1| (protein phosphatase [Fistulifera solaris]) HSP 1 Score: 231.491 bits (589), Expect = 4.285e-70 Identity = 136/321 (42.37%), Postives = 191/321 (59.50%), Query Frame = 0
Query: 60 PRETSRSDGASSPLDSSTASSLATSA---TAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRV-LPVFDG--DACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEES--PFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
P E ++ +P+ +S A+ +TS T + + E MNP R+TMEDV + P G D ++F G+YDGHGGR+IV+FL L +VA+EL ED + + RL+RA+L+TD+ +R A ++ SGAT CL+K + EI AN GDSR +L HQG+ RLT DH+A D E ARIE AGGF+ R RVLGIL++TRS GDH +K +VIG P + ++ S+ +E+ LILACDGV+DVLSD++AV +V RE AA LV+EA+++GS+DN++ IV+ L
Sbjct: 5 PTEQKKTTEFLTPMTTSVATYPSTSGSRLTGPAIEFHEESFQLGNRVVTIGKGEAMNPAWRATMEDVSVIHAPGTWGAPDPDLAFFGLYDGHGGREIVNFLEHGLSFHVAQELAFEDDSDIMTRLQRAFLMTDIHARHAGVLTSGATVAACLLKNQTPNR--------VEIVAANAGDSRVILFHQGEVTRLTEDHRASDLSEVARIEQAGGFLFRERVLGILSLTRSIGDHLLKRFVIGHPSVMSATLDLSSNKENERTLLILACDGVFDVLSDEQAVAVV-----RENASKGAGAARCLVEEALKKGSTDNVSAIVIWL 312
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|219116410|ref|XP_002179000.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409767|gb|EEC49698.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 229.18 bits (583), Expect = 1.711e-69 Identity = 129/273 (47.25%), Postives = 173/273 (63.37%), Query Frame = 0
Query: 106 VSVAEEMNPLRRSTMED---VHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVE-DGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVE-DSTPEESPFLILACDGVWDVLSDDEAVGLVRG-QWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
VS AE MNP RR+TMED +H D M+++ +YDGHGGRD+VDFL + +VA+EL + D A + RLERA+L+ D+ S+ A + SGAT CL++ + +R I+TAN GDSR VL H G+ RLT DH+ +D E ARI+ AGGF+ + RV+G+LAVTRS GDH K +VI P ++ +S E FLI+ACDG++DV++D EAV LVR ERE DAA LVQ+A+RRG++DN+T IV L
Sbjct: 28 VSTAEAMNPTRRNTMEDRYVIHAPGTWNAPDPDMAYLAVYDGHGGRDMVDFLEHGMAYHVAQELTDQTDDAPITTRLERAFLMADIHSKHAGITTSGATVAVCLVQ-----RDPSTPQKLR-IFTANAGDSRIVLGHDGEATRLTLDHRVDDPKEIARIQKAGGFIFKGRVMGVLAVTRSLGDHIFKTFVIAHPAVRELDLQLESGSVEPSFLIIACDGLYDVMTDKEAVDLVRNFAGERE------DAAQFLVQQALRRGTTDNVTAIVAWL 288
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|1013938745|gb|KYQ92435.1| (protein phosphatase 2C-related protein [Dictyostelium lacteum]) HSP 1 Score: 222.631 bits (566), Expect = 8.345e-66 Identity = 125/320 (39.06%), Postives = 176/320 (55.00%), Query Frame = 0
Query: 57 PSLPRETSRSDGASSPLDSSTASSLAT-SATAAIQSIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGL---LVQEAMRRGSSDNITCIVVLL 372
P+L + S G + ++ ++ LA+ S + S P + K + V+ E NP R TMED H ++ F + + IYDGHGGR V+F A L N+ E+ + + +YLLTD Q + ++ SG TA++ LI+ + GE R +Y AN GD+RAV+C K +RL++DHK D E RI AGGFV+ RV GILAVTRS GDH MKDYVIG PY T ++D+ LILACDG+WDV SD E+ L+ E DA + L+ A+++GS+DNI+ IV++L
Sbjct: 83 PTLTPTHNHSAGDNCNNNNEPSTPLASDSFNTSTSSNNSPAKPKIHSVKDIGVSYEKNPRFRRTMEDEHVIIDRFANEDSSGYFAIYDGHGGRGAVEFTAKTLHNNLLDEINKNPNGDMLAYIRESYLLTDRQMEKDNVLFSGTTAISALIRKNQNGE--------RYLYVANAGDARAVICEDKKAIRLSHDHKGSDADEAKRIVDAGGFVVNHRVNGILAVTRSLGDHSMKDYVIGDPYMRTIKLDDT----HTHLILACDGLWDVTSDQESTDLIIN---------ETDAQNMSEKLLNHALKKGSTDNISIIVIIL 381
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|330840367|ref|XP_003292188.1| (hypothetical protein DICPUDRAFT_57785 [Dictyostelium purpureum] >gi|325077576|gb|EGC31279.1| hypothetical protein DICPUDRAFT_57785 [Dictyostelium purpureum]) HSP 1 Score: 222.246 bits (565), Expect = 1.339e-65 Identity = 136/349 (38.97%), Postives = 186/349 (53.30%), Query Frame = 0
Query: 33 KGDRSTKSSTNSNGISRTIQESATPSLPRETSRSDGASSPLDSSTASSLATSATAAIQSIKGTIYPASG-------TFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAE-LMGSGATAVTCLI-KARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
K + S+K+ N +++ +ES S ++ S+PL S + QS P S + + V V+ E NP R TMED H ++ F GD + IYDGHGGR V+F A L N+ EL + V E + +YLLTD Q + E + SG T++T LI K+ +GE R +Y AN GD+RAV+CH RL+YDHK D+ E RI AGGFV+ +RV GILAVTRS GDH MK+YVIG PY + E LILACDG+WDV SD +AV L+ + E + + L+ A++ GS+DNI+ IV++L
Sbjct: 66 KKEDSSKNIENKENVNKKDEESNKEDTESNNSNNETPSTPL--SNPQQPEQPKSQQKQSKSQQYSPESPAKDSKTLSVRDVGVSFEKNPRYRRTMEDEHVIIDCFGGDPTQGYFAIYDGHGGRGAVEFTAKTLHNNLLEELNKDQNGDVLEHFKNSYLLTDKQMNEKESIQFSGTTSITALIRKSPVDGE--------RYLYIANAGDARAVVCHNKVAERLSYDHKGSDQEETKRIVEAGGFVVNNRVNGILAVTRSLGDHSMKEYVIGDPYKRAIKFD----EGHTHLILACDGLWDVTSDQDAVDLILNETEAQK------MSDKLLLHALKSGSTDNISIIVIIL 394
BLAST of EWM23175.1 vs. NCBI_GenBank
Match: gi|66809891|ref|XP_638669.1| (protein phosphatase 2C-related protein [Dictyostelium discoideum AX4] >gi|60467277|gb|EAL65310.1| protein phosphatase 2C-related protein [Dictyostelium discoideum AX4]) HSP 1 Score: 219.55 bits (558), Expect = 1.817e-64 Identity = 123/285 (43.16%), Postives = 165/285 (57.89%), Query Frame = 0
Query: 90 QSIKGTIYPASGT--FKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEESPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372
QS T P+S T + V+ E N R TMED H ++ F GDA + IYDGHGGR V+F A L N+ E+ + E +YLLTD Q ++E+ SG T++T LI+ + +GE + +Y AN GD+RAV+CH RL+YDHK D E RI+AAGGFV RV GILAVTRS GDH MKD+VIG PY + ++ LILACDG+WDV SD +AV L+ + E + + L+ A+++GS+DNI+ IVV+L
Sbjct: 136 QSTHFTTEPSSKTRSVRDFGVSFEKNARYRRTMEDEHVIIDCFGGDANQGYFAIYDGHGGRGAVEFTAKTLHVNLLDEINKSPEGDILELFRNSYLLTDKQMNESEIQFSGTTSITALIR-KNPVDGE------KYLYVANAGDARAVVCHNKVAERLSYDHKGSDPEEVKRIDAAGGFVCNGRVNGILAVTRSLGDHSMKDHVIGDPYKRSIKLDSG----HTHLILACDGLWDVTSDQDAVDLILNETEAQKMSDK------LLLHALKKGSTDNISIIVVIL 403 The following BLAST results are available for this feature:
BLAST of EWM23175.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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