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Properties
| Property Name | Value |
|---|
| Product | ATPase, AFG1-like protein |
| Orig transcript id | gnl|cribi|Naga_100043g32.7224.mrna |
| Orig protein id | gnl|cribi|Naga_100043g32.7224 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:197495..199558 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7543 ID=rna7543|Name=rna7543|organism=Nannochloropsis gaditana|type=mRNA|length=210bp
ATGACAATTTTTGATGAAAGAGGAGACGGAGGTGAGAGATACATTCAGGC
GAAAATGCTACAGAGTAAAACCAAAATTGCAAGGTGTTTCCATGAAAACT
ATAGTAGATATGGTTTCCTGTGTCGCGCAGTCGCAACTTCCCAAATTTCT
TTTAATTTTAATGGTACAGGTTTTCAAATTGCTCGACGCCACACCGTATG
CTTGACCTAG back to topprotein sequence of rna7543 >rna7543-protein ID=rna7543-protein|Name=rna7543|organism=Nannochloropsis gaditana|type=polypeptide|length=576bp
MALLHRMNVKSSRKAFLCPRLSPRLIDQGTSLKRQARLSYLAPTSSSSQG
KGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSSRPEAYRRVT
YKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRV
HFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDI
ADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKE
RNRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPN
AGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLST
RTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFI
TLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLME
MQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDG
RNRWDSAAKVRAFLEDLAEVTLQRRDVVSDALVARMMGSRVTVSARGMEE
FMTEGDGRAKLEAALREGCHGQADGS back to topmRNA from alignment at CM002472.1:197495..199558- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7543 ID=rna7543|Name=rna7543|organism=Nannochloropsis gaditana|type=mRNA|length=2064bp|location=Sequence derived from alignment at CM002472.1:197495..199558- (Nannochloropsis gaditana)
CGAACTTCAAGGCTTTGGGTCCTGCCGCCCTCGACGACGAGTTTTACCAC
CGATCGACATTTTCCCACGATAGATTACGGTAGCTGCAAGGGCCTTGCGG
AAAACATGGCGCTGCTGCATCGGATGAACGTCAAGTCGAGTCGCAAGGCT
TTCCTGTGTCCACGATTATCTCCCCGACTCATTGATCAAGGCACGTCCCT
GAAAAGGCAAGCCCGCCTGTCTTATCTGGCTCCTACGTCGTCCTCCTCGC
AAGGGAAAGGTCCTTTGCAGGCTTATAACGACATGGTCGGAGAGCAACGC
ATAGAATGGAACGGAAAGCAATTGCAGGTGGTGGCCCAATTGCAGCAAGT
CTTCGATCAAGTCCTGGACTTTTCTTCCCGGCCTGAAGCATATCGGCGCG
TGACGTATAAATTCGTTGATTTTGCGATTAAAAAAGAAGAGGTAGTGACG
CCGCCGAAAGGCTTGTATCTGTATGGAGGTGTGGGGACGGGTAAAACTTT
CTTGATGGATTTGTTCTACGCCCAAGCCCCCTCGAGCTGGAAGAAACGCC
GAGTGCACTTCAATCAGTTCATGCTCGAGGTCCACGAACGCCTCCACAGA
CTCCGTAAAGAGGGTCACAGGGGGGATCCTTTGGCGACAGTCGCCGAGGA
TCTTTATCAACAAGCGTGGCTCCACTGCTTCGACGAGTTTCAGGTCACTG
ATATAGCGGACGCCATGGTGTTGAAACGCCTTTTTTCGGGGCTTTTGCAG
AGAGGCTCTGTAATGATCAGCACATCGAACCGACCTCCCGAAGATCTCTA
CCTAAACGGACTCCAGCGAGACTTGTTCCTACCTTTCATCGAGCTCCTCA
AGGAGAGGAACCGAGTGCATTATATCGACTCCCCCACCGACTATCGGCTG
GTGCATCGGGCTTACGGCCTCGCCACCGACACGCTATTCGTCCACAGCCG
GAGGCTGACAGGGTTGATGAATGGCGAGGCAGCGCCAGCCTTGGCAGTAC
CGAATGCAGGCGAGGAGATGGAGGAGGACGGGGCGCGGTTCGGCTTCAAG
GAGGCGCTAAAGAGCGCCACGAAGGGGCAAGCCATGACCCCCGTGGGGAT
CCCGCTCCCTCAACAGGGCCGGAGGGTCCACGTTCCTCGTGTGGGGCTGA
GCACGCGCACGGCCCTCTTCACGTTTCAGGAGCTGTGCGAGCAGCCCCTG
GGCGCCGCGGACTACATCGCCTTGTCGCAGTCCCTCCCCACGCTCTTCTT
GGCCGACGTCCCCGTTATGACGCTCGTAGATGTGAACAAGCTCCGCCGCT
TCATCACGCTCGTCGACTGCCTCTACGAGGCCCGCACCCAGCTGGTACTC
CTGACGGACGCGCCCGTCTCCGAGCTTTTCGACGCGGCCGCCTACAGCGA
GAGCGCCCAGGACGAGGTCTTCGCCTTCGGTCGCACCGTCTCCCGGCTCA
TGGAGATGCAGGGGGCGGACTACCGGGAGCACCACCAGACGGCCCTTTCC
AAGAACGACGGGGCCACGCTGCTGGGCAGGGCCTTGGGAGGAAGGGACGG
AGGGTGGCCTGGGCCGGGGCCTGAGGAGCTCTTTGGCTTCTACAACCTGG
ACGGGAGGAACCGGTGGGACTCGGCGGCCAAGGTGCGCGCCTTTCTGGAG
GACCTGGCCGAGGTGACGCTGCAGCGGCGGGACGTGGTCTCGGACGCGTT
GGTCGCACGGATGATGGGCTCGCGCGTGACCGTCTCGGCGCGGGGGATGG
AGGAGTTCATGACGGAGGGCGACGGACGGGCCAAGCTGGAGGCAGCGCTG
AGAGAGGGATGCCACGGCCAGGCGGATGGGTCGTGAGAGGGCTCTCAAGA
CGTTGCCTATGTGGGCGGAGGCGCGATCGTCCATGTATGCCTGTGCGCCA
GCGCCTGGTGGATAGAAACTCGGAAACAGGCCCGGGGTCGACCCGCGGGC
GCAGGCGAGGGCTAGGTCAAGCATACGGTGTGGCGTCGAGCAATTTGAAA
ACCTGTACCATTAAAATTAAAAGAAATTTGGGAAGTTGCGACTGCGCGAC
ACAGGAAACCATAT back to topCoding sequence (CDS) from alignment at CM002472.1:197495..199558- >rna7543 ID=rna7543|Name=rna7543|organism=Nannochloropsis gaditana|type=CDS|length=1731bp|location=Sequence derived from alignment at CM002472.1:197495..199558- (Nannochloropsis gaditana)
ATGGCGCTGCTGCATCGGATGAACGTCAAGTCGAGTCGCAAGGCTTTCCT
GTGTCCACGATTATCTCCCCGACTCATTGATCAAGGCACGTCCCTGAAAA
GGCAAGCCCGCCTGTCTTATCTGGCTCCTACGTCGTCCTCCTCGCAAGGG
AAAGGTCCTTTGCAGGCTTATAACGACATGGTCGGAGAGCAACGCATAGA
ATGGAACGGAAAGCAATTGCAGGTGGTGGCCCAATTGCAGCAAGTCTTCG
ATCAAGTCCTGGACTTTTCTTCCCGGCCTGAAGCATATCGGCGCGTGACG
TATAAATTCGTTGATTTTGCGATTAAAAAAGAAGAGGTAGTGACGCCGCC
GAAAGGCTTGTATCTGTATGGAGGTGTGGGGACGGGTAAAACTTTCTTGA
TGGATTTGTTCTACGCCCAAGCCCCCTCGAGCTGGAAGAAACGCCGAGTG
CACTTCAATCAGTTCATGCTCGAGGTCCACGAACGCCTCCACAGACTCCG
TAAAGAGGGTCACAGGGGGGATCCTTTGGCGACAGTCGCCGAGGATCTTT
ATCAACAAGCGTGGCTCCACTGCTTCGACGAGTTTCAGGTCACTGATATA
GCGGACGCCATGGTGTTGAAACGCCTTTTTTCGGGGCTTTTGCAGAGAGG
CTCTGTAATGATCAGCACATCGAACCGACCTCCCGAAGATCTCTACCTAA
ACGGACTCCAGCGAGACTTGTTCCTACCTTTCATCGAGCTCCTCAAGGAG
AGGAACCGAGTGCATTATATCGACTCCCCCACCGACTATCGGCTGGTGCA
TCGGGCTTACGGCCTCGCCACCGACACGCTATTCGTCCACAGCCGGAGGC
TGACAGGGTTGATGAATGGCGAGGCAGCGCCAGCCTTGGCAGTACCGAAT
GCAGGCGAGGAGATGGAGGAGGACGGGGCGCGGTTCGGCTTCAAGGAGGC
GCTAAAGAGCGCCACGAAGGGGCAAGCCATGACCCCCGTGGGGATCCCGC
TCCCTCAACAGGGCCGGAGGGTCCACGTTCCTCGTGTGGGGCTGAGCACG
CGCACGGCCCTCTTCACGTTTCAGGAGCTGTGCGAGCAGCCCCTGGGCGC
CGCGGACTACATCGCCTTGTCGCAGTCCCTCCCCACGCTCTTCTTGGCCG
ACGTCCCCGTTATGACGCTCGTAGATGTGAACAAGCTCCGCCGCTTCATC
ACGCTCGTCGACTGCCTCTACGAGGCCCGCACCCAGCTGGTACTCCTGAC
GGACGCGCCCGTCTCCGAGCTTTTCGACGCGGCCGCCTACAGCGAGAGCG
CCCAGGACGAGGTCTTCGCCTTCGGTCGCACCGTCTCCCGGCTCATGGAG
ATGCAGGGGGCGGACTACCGGGAGCACCACCAGACGGCCCTTTCCAAGAA
CGACGGGGCCACGCTGCTGGGCAGGGCCTTGGGAGGAAGGGACGGAGGGT
GGCCTGGGCCGGGGCCTGAGGAGCTCTTTGGCTTCTACAACCTGGACGGG
AGGAACCGGTGGGACTCGGCGGCCAAGGTGCGCGCCTTTCTGGAGGACCT
GGCCGAGGTGACGCTGCAGCGGCGGGACGTGGTCTCGGACGCGTTGGTCG
CACGGATGATGGGCTCGCGCGTGACCGTCTCGGCGCGGGGGATGGAGGAG
TTCATGACGGAGGGCGACGGACGGGCCAAGCTGGAGGCAGCGCTGAGAGA
GGGATGCCACGGCCAGGCGGATGGGTCGTGA back to top
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