EWM23141.1, cds7525 (CDS) Nannochloropsis gaditana

Overview
NameEWM23141.1
Unique Namecds7525
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:197723..199453 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23141.1
ProductATPase, AFG1-like protein
Orig transcript idgnl|cribi|Naga_100043g32.7224.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:197723..199453 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005654ATPase_AFG1-like
Homology
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|585104022|gb|EWM23141.1| (ATPase, AFG1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1186.02 bits (3067), Expect = 0.000e+0
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0
Query:    1 MALLHRMNVKSSRKAFLCPRLSPRLIDQGTSLKRQARLSYLAPTSSSSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSSRPEAYRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDVVSDALVARMMGSRVTVSARGMEEFMTEGDGRAKLEAALREGCHGQADGS 576
            MALLHRMNVKSSRKAFLCPRLSPRLIDQGTSLKRQARLSYLAPTSSSSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSSRPEAYRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDVVSDALVARMMGSRVTVSARGMEEFMTEGDGRAKLEAALREGCHGQADGS
Sbjct:    1 MALLHRMNVKSSRKAFLCPRLSPRLIDQGTSLKRQARLSYLAPTSSSSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSSRPEAYRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDVVSDALVARMMGSRVTVSARGMEEFMTEGDGRAKLEAALREGCHGQADGS 576          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|1173960978|gb|OQS07056.1| (hypothetical protein THRCLA_00940 [Thraustotheca clavata])

HSP 1 Score: 330.102 bits (845), Expect = 3.502e-103
Identity = 193/508 (37.99%), Postives = 291/508 (57.28%), Query Frame = 0
Query:   32 LKRQARLSYLAPTSSSSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSSRPEAYRRVTYKFVDF--AIKKEE--VVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYID-SPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAA--PALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDVVSDAL 532
            ++R +R+      S +S  +  L  YN+ V ++ I  +  Q++ +  L+++  ++L     P      T  F  +     KEE   +  PKG+YLYGGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LRK+G   DP+  + ++L +++ + CFDEFQVTD+ADA++L+RLFS +++ GS++++TSNRPP+DLY NGLQRDLFLPFI LL+E + VH ++ S TDYR                  +L G+   E      L V N          R  F +  K  +K  ++ PV + L  QGR + V +  +  +  L +F +LC++PLGAADY+ L ++   +F+ D+P++ + + N  RRFIT VDC+YE + QL  L  AP  +L      S++  DE FAF RTVSRLMEMQ  +Y         K D   +L  AL  ++  +     ++L+  YN D  + +    ++RA LED+ E+    R+V ++ L
Sbjct:    3 IRRASRVHLSLHRSFTSATRSLLDIYNEAVDKKEIRRDMVQIKALGHLERLQHELLTVVDEPPKKEEATSMFASWFGNDDKEEKKTIKSPKGVYLYGGVGCGKTFLMDMFYDNLPVE-SKRRVHFHKFMLEVHEKMHELRKQGFHEDPIPHITKELVEKSRVLCFDEFQVTDVADALILRRLFSSMIEAGSIVVATSNRPPKDLYKNGLQRDLFLPFIALLQETSVVHSLEESSTDYR------------------KLKGVSEVEHVYRSPLTVEN----------RAMFLQHFKDLSKDDSIEPVKLHL--QGRTLQVEQAAIREKVCLMSFSDLCDKPLGAADYLVLGEAFDYVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLAAAPPMDLLIQNQDSKNVLDEAFAFDRTVSRLMEMQSEEYITKAMEE-EKPDCFEML-EALKNKEILY--DDVKKLWKEYNSDN-SEYLEEVEMRALLEDICELHEGHRNVPAEVL 474          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|1173949007|gb|OQR97085.1| (hypothetical protein ACHHYP_12761 [Achlya hypogyna])

HSP 1 Score: 324.324 bits (830), Expect = 4.579e-101
Identity = 195/503 (38.77%), Postives = 287/503 (57.06%), Query Frame = 0
Query:   37 RLSYLAPTSSSSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVL--DFSSRPEAYRRVTYKFVDFAIKKE----EVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYID-SPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDVVSDAL 532
            R + L  + +++  +  L  Y + V ++ I  +  Q++ ++ LQ++ + VL  D +  P+     T  F  +  K E    +  T PKG+Y+YGGVG GKTFLMD+F+   P    KRRVHF++FMLEVHE++H+LRKEG   DP+  + ++L + + + CFDEFQVTD+ADA++L+RLFS +++ GS++++TSNRPP DLY NGLQRDLFLPFI LL+E + VH ++ S TDYR                  +L G    E      +    + +        F E  K  TKG A+ PV   L  QGR V V +  +  +  L +F +LC++PLGAADY+ + ++  T+F+ D+P++ + + N  RRFIT VDC+YE + QL  L  A   +L    A S++  DE FAF RTVSRLMEMQ  +Y      A  K D   LL      R+        + L+  YN +     D   +VR  LED++E+ +  R+V + AL
Sbjct:    6 RPALLQRSMATAAPRSLLAIYQEAVDKKEIHADVVQVKALSHLQRLQEDVLSMDLTPAPKV-EEATSMFASWFGKDETPAPKARTSPKGVYMYGGVGCGKTFLMDMFFDNLPIE-SKRRVHFHKFMLEVHEKMHQLRKEGLHEDPIPHITKELVETSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLEESSTDYR------------------KLKGEDEVEHVYRSPITATNQRL--------FHEHFKLLTKGDAIEPVK--LQTQGRTVAVEQAAIREKVCLMSFADLCDKPLGAADYLVIGEAFDTVFVEDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLAAALPMDLLVQNAGSKNVLDEAFAFDRTVSRLMEMQSEEYVTKAMDA-EKPDRFELLQEL---RNKEILYDDVKRLWNEYNTNA----DGYLEVRVLLEDISELHVGHRNVPAQAL 470          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|669165214|ref|XP_008618169.1| (hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530730279|gb|EQC28521.1| hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 321.242 bits (822), Expect = 1.241e-100
Identity = 182/418 (43.54%), Postives = 247/418 (59.09%), Query Frame = 0
Query:   47 SSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFS-SRPEAY--RRVTYKFVDFAIKKE----EVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYID-SPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADY 456
            +S  +  L  Y + V +Q I  +  Q++ +  LQ++ D+VLD   S P A      T  F  +   KE    E    PKG+Y++GGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LRK G   DP+  + ++L   + + CFDEFQVTD+ADA++L+RLFS +++ GS++++TSNRPP DLY NGLQRDLFLPFI LL+E + VH +D S TDYR                       + GE      V +   +   +  R  F E  K  TKG A+ PV   L  QGR V+V    +  +    TF ELC++PLGAADY+AL ++  T+F+ D+P++ + + N  RRFIT VDC+YE + QL  L DA    L      S+S  DE FAF RTVSRL+EMQ  +Y
Sbjct:   17 ASSARPLLDIYQEAVTKQEIRADAVQVKALVHLQRLQDEVLDMDLSTPAAIAIEEPTSMFSAWFGAKEARVPEKKASPKGVYMHGGVGCGKTFLMDMFYDNLPIE-SKRRVHFHKFMLEVHEKMHTLRKAGLHEDPIPHITKELVATSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLDESSTDYRK----------------------LKGEDE----VEHVYRQPLTEANRRLFYEHFKLFTKGDAIEPVK--LHTQGRTVNVEHAAIREKVCQVTFSELCDKPLGAADYLALGEAFDTVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLADALPMHLLVQNPESKSVLDEAFAFDRTVSRLLEMQSEEY 405          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|813208349|ref|XP_012210253.1| (hypothetical protein SPRG_14379 [Saprolegnia parasitica CBS 223.65] >gi|641524452|gb|KDO19042.1| hypothetical protein SPRG_14379 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 323.168 bits (827), Expect = 1.691e-100
Identity = 202/489 (41.31%), Postives = 278/489 (56.85%), Query Frame = 0
Query:   47 SSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFS-SRPEA--YRRVTYKFVDFAIKKEEVV----TPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYID-SPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDV 527
            +S  +  L  Y + V +Q I  +  Q++ +A LQ++ D+VL  S S P A      T  F  +   KEE V      PKG+Y++GGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LRK G   DP+  + ++L   + + CFDEFQVTD+ADA++L+RLFS +++ GS++++TSNRPP DLY NGLQRDLFLPFI LL+E + VH +D S TDYR                  +L G    E      +  A + +        F E  K  TKG A+ PV   L  QGR V+V    +  +  L TF ELC++PLGAADY+ L ++  T+F+ D+P++ + + N  RRFIT VDC+YE + QL  L  A    L      S+S  DE FAF RTVSRL+EMQ  +Y      A  K D   LL  AL  ++  +     + L+  YN +  N +    ++R  LED+ E+    RDV
Sbjct:   17 TSSARPLLDIYQEAVTKQEIRADAVQVKALAHLQRLQDEVLAMSLSTPVAAEIEEPTSIFSAWFGAKEERVPEKMASPKGVYMHGGVGCGKTFLMDMFYDNLPIE-SKRRVHFHKFMLEVHEKMHMLRKAGLHEDPIPHITKELVATSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLDESSTDYR------------------KLKGEDEVEHVYRQPLTEANQRL--------FYEHFKLFTKGDAIEPVK--LHTQGRAVNVEHAAIREKVCLVTFSELCDKPLGAADYLVLGEAFDTVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLAAALPMHLLVQNPESKSVLDEAFAFDRTVSRLLEMQSEEYVTKAIDA-QKPDRFELL-EALRAKEILY--DDVKRLWNEYNTNA-NGFLEEHEMRMLLEDINELHNGSRDV 471          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|669165212|ref|XP_008618168.1| (hypothetical protein SDRG_13848 [Saprolegnia diclina VS20] >gi|530730278|gb|EQC28520.1| hypothetical protein SDRG_13848 [Saprolegnia diclina VS20])

HSP 1 Score: 319.701 bits (818), Expect = 3.466e-99
Identity = 200/489 (40.90%), Postives = 275/489 (56.24%), Query Frame = 0
Query:   47 SSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFS-SRPEAY--RRVTYKFVDFAIKKE----EVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYID-SPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDV 527
            +S  +  L  Y + V +Q I  +  Q++ +  LQ++ D+VLD   S P A      T  F  +   KE    E    PKG+Y++GGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LRK G   DP+  + ++L   + + CFDEFQVTD+ADA++L+RLFS +++ GS++++TSNRPP DLY NGLQRDLFLPFI LL+E + VH +D S TDYR                  +L G    E      +  A   +        F E  K  TKG A+ PV   L  QGR V+V    +  +    TF ELC++PLGAADY+AL ++  T+F+ D+P++ + + N  RRFIT VDC+YE + QL  L DA    L      S+S  DE FAF RTVSRL+EMQ  +Y      A  K D   LL   L  ++  +     + L+  YN +  N +    ++R  LED+ E+    RDV
Sbjct:   17 ASSARPLLDIYQEAVTKQEIRADAVQVKALVHLQRLQDEVLDMDLSTPAAIAIEEPTSMFSAWFGAKEARVPEKKASPKGVYMHGGVGCGKTFLMDMFYDNLPIE-SKRRVHFHKFMLEVHEKMHTLRKAGLHEDPIPHITKELVATSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLDESSTDYR------------------KLKGEDEVEHVYRQPLTEANRRL--------FYEHFKLFTKGDAIEPVK--LHTQGRTVNVEHAAIREKVCQVTFSELCDKPLGAADYLALGEAFDTVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLADALPMHLLVQNPESKSVLDEAFAFDRTVSRLLEMQSEEYVTKAIDA-QKPDRFELL-ETLRVKEILY--DDVKRLWNGYNTNA-NGFLEQHEMRVLLEDINELHDGSRDV 471          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|566008484|gb|ETI31395.1| (hypothetical protein F443_21634 [Phytophthora parasitica P1569])

HSP 1 Score: 308.531 bits (789), Expect = 2.789e-95
Identity = 165/411 (40.15%), Postives = 242/411 (58.88%), Query Frame = 0
Query:   57 YNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSS-RPEA---------YRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKER-NRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADY 456
            Y        + ++  Q++ V  L  ++D+V+ +   +P+A         ++++T K       ++E +  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H LR++G   DP+  +A++L + +WL CFDEFQVTD+ADA++L+RLFS LL RG VM++TSNRPP DLY NGLQR+LF+PFI+LL ER N V   DS TDYR+                  L G ++ +        N  E       R  F     +  KG+    V   +  QGR+VHVP   +      FTF +LC++PLGAADY+A++++   +F++D+P++    +N++RRFIT VDC+Y+   +L  L       L+      +S  DEVFAF RTVSRL+EM    Y
Sbjct:   42 YKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEK---TEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVPVK-HKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRV------------------LKGAIHAD--------NVYEYPITPDTRAAFDYEFMTYCKGEET--VATYVTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAY 420          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|675179265|ref|XP_008898517.1| (hypothetical protein PPTG_06364 [Phytophthora parasitica INRA-310] >gi|568034013|gb|ETM31700.1| hypothetical protein L914_20781 [Phytophthora parasitica] >gi|568101473|gb|ETN16159.1| hypothetical protein PPTG_06364 [Phytophthora parasitica INRA-310] >gi|570966231|gb|ETP29350.1| hypothetical protein F442_21488 [Phytophthora parasitica P10297])

HSP 1 Score: 308.145 bits (788), Expect = 3.072e-95
Identity = 165/411 (40.15%), Postives = 242/411 (58.88%), Query Frame = 0
Query:   57 YNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSS-RPEA---------YRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKER-NRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADY 456
            Y        + ++  Q++ V  L  ++D+V+ +   +P+A         ++++T K       ++E +  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H LR++G   DP+  +A++L + +WL CFDEFQVTD+ADA++L+RLFS LL RG VM++TSNRPP DLY NGLQR+LF+PFI+LL ER N V   DS TDYR+                  L G ++ +        N  E       R  F     +  KG+    V   +  QGR+VHVP   +      FTF +LC++PLGAADY+A++++   +F++D+P++    +N++RRFIT VDC+Y+   +L  L       L+      +S  DEVFAF RTVSRL+EM    Y
Sbjct:   42 YKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEK---TEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVPVE-HKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRV------------------LKGAIHAD--------NVYEYPITPDTRAAFDYEFMTYCKGEET--VATYVTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAY 420          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|568004096|gb|ETL78431.1| (hypothetical protein L917_20771 [Phytophthora parasitica])

HSP 1 Score: 308.145 bits (788), Expect = 3.105e-95
Identity = 165/411 (40.15%), Postives = 242/411 (58.88%), Query Frame = 0
Query:   57 YNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSS-RPEA---------YRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKER-NRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADY 456
            Y        + ++  Q++ V  L  ++D+V+ +   +P+A         ++++T K       ++E +  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H LR++G   DP+  +A++L + +WL CFDEFQVTD+ADA++L+RLFS LL RG VM++TSNRPP DLY NGLQR+LF+PFI+LL ER N V   DS TDYR+                  L G ++ +        N  E       R  F     +  KG+    V   +  QGR+VHVP   +      FTF +LC++PLGAADY+A++++   +F++D+P++    +N++RRFIT VDC+Y+   +L  L       L+      +S  DEVFAF RTVSRL+EM    Y
Sbjct:   42 YKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEK---TEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVPVE-HKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRV------------------LKGAIHAD--------NVYEYPITPDTRAAFDYEFMTYCKGEET--VATYVTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAY 420          
BLAST of EWM23141.1 vs. NCBI_GenBank
Match: gi|567945958|gb|ETK71769.1| (hypothetical protein L915_21037 [Phytophthora parasitica] >gi|567974624|gb|ETL25213.1| hypothetical protein L916_20913 [Phytophthora parasitica] >gi|570935925|gb|ETP01182.1| hypothetical protein F441_21526 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 308.145 bits (788), Expect = 3.455e-95
Identity = 165/411 (40.15%), Postives = 242/411 (58.88%), Query Frame = 0
Query:   57 YNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSS-RPEA---------YRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKER-NRVHYIDSPTDYRLVHRAYGLATDTLFVHSRRLTGLMNGEAAPALAVPNAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADY 456
            Y        + ++  Q++ V  L  ++D+V+ +   +P+A         ++++T K       ++E +  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H LR++G   DP+  +A++L + +WL CFDEFQVTD+ADA++L+RLFS LL RG VM++TSNRPP DLY NGLQR+LF+PFI+LL ER N V   DS TDYR+                  L G ++ +        N  E       R  F     +  KG+    V   +  QGR+VHVP   +      FTF +LC++PLGAADY+A++++   +F++D+P++    +N++RRFIT VDC+Y+   +L  L       L+      +S  DEVFAF RTVSRL+EM    Y
Sbjct:   42 YKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEK---TEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVPVK-HKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRV------------------LKGAIHAD--------NVYEYPITPDTRAAFDYEFMTYCKGEET--VATYVTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAY 420          
The following BLAST results are available for this feature:
BLAST of EWM23141.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104022|gb|EWM23141.1|0.000e+0100.00ATPase, AFG1-like protein [Nannochloropsis gaditan... [more]
gi|1173960978|gb|OQS07056.1|3.502e-10337.99hypothetical protein THRCLA_00940 [Thraustotheca c... [more]
gi|1173949007|gb|OQR97085.1|4.579e-10138.77hypothetical protein ACHHYP_12761 [Achlya hypogyna... [more]
gi|669165214|ref|XP_008618169.1|1.241e-10043.54hypothetical protein, variant [Saprolegnia diclina... [more]
gi|813208349|ref|XP_012210253.1|1.691e-10041.31hypothetical protein SPRG_14379 [Saprolegnia paras... [more]
gi|669165212|ref|XP_008618168.1|3.466e-9940.90hypothetical protein SDRG_13848 [Saprolegnia dicli... [more]
gi|566008484|gb|ETI31395.1|2.789e-9540.15hypothetical protein F443_21634 [Phytophthora para... [more]
gi|675179265|ref|XP_008898517.1|3.072e-9540.15hypothetical protein PPTG_06364 [Phytophthora para... [more]
gi|568004096|gb|ETL78431.1|3.105e-9540.15hypothetical protein L917_20771 [Phytophthora para... [more]
gi|567945958|gb|ETK71769.1|3.455e-9540.15hypothetical protein L915_21037 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7543rna7543Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications