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Properties
| Property Name | Value |
|---|
| Product | Proteasome, beta-type subunit, conserved site |
| Orig transcript id | gnl|cribi|Naga_100043g25.7226.mrna |
| Orig protein id | gnl|cribi|Naga_100043g25.7226 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:190196..191677 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7537 ID=rna7537|Name=rna7537|organism=Nannochloropsis gaditana|type=mRNA|length=2841bp
AATATTACACGACGCAAAAGGGGGAAAAAATCTCCTTGGAACAAATCCTG
TCGGAATTTTAGATTAATGTAGCGCGGTAACTGATCTTATTTTTGATTCG
TGCTTGGCGTGACAGGAAGATCCTCTGAATAATGGCACGACGGCGGAGAC
ACTCCCAGAAAGTTCAAGGCGATAAGCATCCCAAAAACAGGAAAATACCC
CCTTCATCACTACCTGATATGAGCGACGATGATGAAATGGATTTTCCAGC
AGCTCCCCCGCCTGGGCCGGCGTCAGGAAGAGTATTACTCCGGAGTCAGA
CTATGGTCAGCAACAGCAGTGCTGCAAAAAAGAACCGCCGACTTGACCAG
AGATATATACATCCTCAGATTAACGGTCTAAGAAATTGTAAGCAAGCGAA
GGACACCGTTTGGGGCGCCGGTTGGGAACGCTTAGGGCTAGGTCTCTCAC
CGAAGTCGTACCATAAGTCCTTCAACAAGCTGCACTCTGTTTGCCAGAGT
ATGGTCGATCGGAGTTTCTCGACCATCGTAGAATTAGAAGATGGGATGTT
TTGGTCTACCCTTCTGCAAGGCTTCAGTGTTTTACCTTTCTTAATGCTTA
TTGCGACAATATGCTCAAACATGGCCATGGGAATCCTCTTCACGGCCGTT
GGCGACGTTCCTCATGTGGAGGGATGGGCAGACTGGGCGCGCCTCGGCTT
TTCCACCGTCGGGACAATGACAGCTTTACGGAATTTGCTCATTTCAATGT
ATGAACTGCTTCTGGACTCAACGGCGCAGTACCCTTTATTGAATCCGAGG
TTGCTAAGTCGGCTGCGAAATATCGTAGCTGTCCGGCCGCGCGGTCTGCA
GCGGCTCATCGCTGCAATGCACCTAATATCCTGCGTCACCCTTTATGGCC
TCACCATCCTGGGCATACAGCAAGGAAACCTGCCTGCGGTCTGGCTGTCT
CGTTGTCATTTTTTTGCGGGCAACACAGTCATCAAGCTTCTTCTGTGGTT
GAGTTTTGAAAGCAAAACCGGTAAAAAAGAGCGCAACGGAGCGATGAGCG
GGGGAAAGGTGCCGAGTCAAGCTGCGCTTTCTAATTATGCAGAAAAAGGC
CGCAATTGTCGATCATTGCGATTTCTCCGCCAGGCCGTGGTGTACTACGT
GTCAGCATCGGATGTTGTCCTGCTTCTCTTCCTGGTGGAAAACTACTTGA
CCCGCAAAGAGGGCCGCGAGCTGCTGCAACTCCAACAGAACACCCACCAC
GACGAGCTGGAGCGGCGAGTGGTGGCCTTCAACAGTTTGGCGCTGGTCCT
GACCAATTTGGCAGCCTTTGGAATGTTCACGTACGAGGCCTTGACCTACG
GGGTCCAAATCTTGAACCGTGCAACCTGGACTGCATCCATCGCTCACTCT
CGTCAAGCCTCGCTCATTTTCACGTGCCTTGCTTATTGCCTCTCTATGCG
TCGGCACGGATATCTACCGTCTTTTTTCACCCTTCTGGTCGTCTTCAATG
GTCAAAGTCTCTCAAAGGTCTCGCTCTGGGCTTGCATCGAGGTTCAGCGA
ACGCTTGTACCCCTGTGGGAGATCATTCGCAGACGCCCCGTTAAATTTGC
TCTCGGCCTAGCTGCCTATGGTCTTGTTACCCGCACGCCCTCGGACGCCC
TGCTTCTCGCGCTTTTTATTGCCTCAGCCTTCTGGGCATGGCGAATTCAG
ATTCGTTTGCATTATGTAGACATCTGGGCATTTGGATTGACCACTCTCGC
CGTCCTCATGACTTTCCACCAGGCCTGGCAAGGTGCGCTTCTTGACCCGG
ACACTAGCGGTCCGACCCCGCAGCATGACGCCGGTATTTTCGAAATTCAG
CTTTCGGACACGCATCTTAATATCACTTCCAGGCTTGGACTAGAGTCCAT
TGCTTTGCGTTCTCCTCCTCTTCTCAACCCTATCCACTCTTCCTCCACGG
CGTATCCCTTTTGCAGCATGGACTTTCACGGCCTTTCCCTCCTAGACTAC
ACCTCCTTATCGTTCCTGGCTTATCTTAAGCGGGACTCTCCGGCGTTTCG
TGGGTTTTTGTCCGCCGCCTTTGATCCAACCGAATGGAGAATCATGCACA
CACCGTCTCCAAGGGCGCAAGGCGCCGTTTTCATTGACATGTACAACAGT
CGCCTCAACACGTCAGTAATCGCCATCAGAGGTACAAATCCGACCAATTT
TTTCGACGTTTTTCAGGATATGATCATGTTCAATGGAGCATTTTGCTGGG
ACGTGGTGGGGATGTTAGTGCCGCTTGTTCGCTGGCTTCCCTCCATGTGG
ACTGCAAACCTTCTTTACATCTCCTATTTACCTCTCAGAATCAAGTTTGA
GTCACTCCATGCCTATCGAGGCCTCTCCCTACACTACCACCAAGAAATTC
AAAACTATGTGGAGGAAATCCGCGACCGAAAGGTGGTGCTTACGGGGCAC
TCGTTAGGGGGGGGGATCGGCAAGGTGGTTGCTGCAAGGCTCTACCTTCC
CATCGTGGCCATATCGTCTCCTGGCATTGCTCTTAGTCATAAGATATTCC
AAGTGCCGCTTCAGAGTCTGGACAAATTCGAGGTCAACCTTATAGCTGCC
GAAGACATCGTGCCGAAAATAGACAGGTTAACGGGTGTGGTTTTAAAGAT
GCATTGCCACAAGCCCAATCCCCTAAACTGCCACGAACTTTCCCACACTC
TTGTGGAATTGCATGATAAGTGTGGACTTCATCTGTACACAGAAAAGATA
CCCAGCCAACATTAAAAATATCAACTATGTTCGATACGTTGACTGACGAA
ACCAAATTCATTTTGAGGTTTACCATTTCAAAAAGTAAAGA back to topprotein sequence of rna7537 >rna7537-protein ID=rna7537-protein|Name=rna7537|organism=Nannochloropsis gaditana|type=polypeptide|length=280bp
MTFCTHSPLEHLPACASSEVVHLNTFVPSPSNPSNRPASDVCSSGTTKKE
NSYSFAENLTREIHGNNDPIIPWQLQSILEYNGGAVVAMVGKNCVAIASD
LRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYK
LREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMD
LIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASV
DRDALSGWGAVVHVITPDGVTSRTLKARQD back to topmRNA from alignment at CM002472.1:190196..191677+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7537 ID=rna7537|Name=rna7537|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp|location=Sequence derived from alignment at CM002472.1:190196..191677+ (Nannochloropsis gaditana)
ATGACATTCTGTACTCACAGCCCGCTTGAACATTTGCCGGCTTGCGCTTC
CAGCGAAGTCGTCCATCTCAACACATTtgtcccttccccatcaaACCCAT
CAAACAGGCCAGCGTCAGACGTGTGCTCTTCCGGTAcgacaaaaaaagaa
aattcgTACTCTTTTGCTGAAAATCTGACTCGCGAGATTCATGGTAAGTT
TTTCATGACCTAGGTTTCTTGTTGTTAATCAAGTTTTCGTCGTTCGAGAC
AGTGCCATTGTGAACGAATTAAGCCGTCTTACAATCGCCAGAGGACATAT
AGTAACGATCCTATCATCCCTTGGCAACTTCAGTCTATTCTCGAATATAA
TGGCGGAGCAGTTGTGGCGATGGTGGGCAAGAATTGTGTCGCCATAGCCA
GGTGAGCATAATGAGAGGGGATAGAAGAACAGGGAACGTCATTGGGCACT
TGTGAAGATGATGTTGGTGATACTTGTGGTCTGCAGAATCGGTACGAATA
CTATTGTAGTTCAAAAGCAGAGCACCTCTTTTCTAAGTGGTTGAGTGATC
TCAGCAGTGCAACCCGTGACAATATTGTTTGGCATGAATTTCCCTTTCCT
GATTGCAGTGACTTGCGGTATGGCGTCCAGGCGCAGACAGTGGCCTGCAA
TTTTCCCAAGGTACGTGTCAGAAGCTGGAGAACTGGTTCGAAGATCAACC
GCTCTGCCCCTTCTCGGTTTGTGTCGTGCGCCCCTCGAGGATTGTCCCac
ccacctctcccacctgTGCCTGAAACAGGTCCACAAGATGAGCGACCGCC
TCTTCGTGGGGCTCTCGGGCCTGGCCACAGACATCCAGACCCTCGAGCAG
CTCTTACGTTTTCGCCTCAACCTGTACAAGCTGCGAGAGGAACGAGACAT
AAAGCCGGAGactttctccgccctcctctcccacatcCTATACGAGAAGC
GTTTCGGACCTTACTTCGTGGAGCCCCTGGTAGCGGGGttgagggcggag
gacaaCACCCCTTTCATTTCTGGCATGGATCTGATCGGCGCCCCTGTGTT
CGCTAAGGACTTTGTGGTGGCTGGCACGTGCGCCGCCAACCTGTACGGGC
TGTGTGAGTCCTTCTTTAAGCCAGATTTAGAGCCAGAGCAACTCTTCGAG
GTTCTCTCTCAGTCCTTGCTCGCGTCCGTAGATAGGGACGCTCTGAGCGG
CTGGGGCGCGGTCGTCCACGTCATGTAAGTGAAGGTCATTTGTATGCGCT
AaaggccggagggaggttggggaagatggagatTGAAGGTCCAGGGGGGT
CCAATCGCTCGTGACACCTGAAGATGCGTCGAAGACACTGTTTTGCTAAG
TGTAGGCGCAGATGGAGGGCTTCGTTTAAAAAGCGTCAGTCTTCATTATG
ATATCCATCTATCAATTCTTTTCCCAACTACAGTACTCCAGATGGTGTGA
CGTCGCGGACATTGAAAGCCAGACAGGATTAA back to topCoding sequence (CDS) from alignment at CM002472.1:190196..191677+ >rna7537 ID=rna7537|Name=rna7537|organism=Nannochloropsis gaditana|type=CDS|length=4215bp|location=Sequence derived from alignment at CM002472.1:190196..191677+ (Nannochloropsis gaditana)
ATGACATTCTGTACTCACAGCCCGCTTGAACATTTGCCGGCTTGCGCTTC
CAGCGAAGTCGTCCATCTCAACACATTtgtcccttccccatcaaACCCAT
CAAACAGGCCAGCGTCAGACGTGTGCTCTTCCGGTAcgacaaaaaaagaa
aattcgTACTCTTTTGCTGAAAATCTGACTCGCGAGATTCATGGTAATAA
CGATCCTATCATCCCTTGGCAACTTCAGTCTATTCTCGAATATAATGGCG
GAGCAGTTGTGGCGATGGTGGGCAAGAATTGTGTCGCCATAGCCAGTGAC
TTGCGGTATGGCGTCCAGGCGCAGACAGTGGCCTGCAATTTTCCCAAGGT
CCACAAGATGAGCGACCGCCTCTTCGTGGGGCTCTCGGGCCTGGCCACAG
ACATCCAGACCCTCGAGCAGCTCTTACGTTTTCGCCTCAACCTGTACAAG
CTGCGAGAGGAACGAGACATAAAGCCGGAGactttctccgccctcctctc
ccacatcCTATACGAGAAGCGTTTCGGACCTTACTTCGTGGAGCCCCTGG
TAGCGGGGttgagggcggaggacaaCACCCCTTTCATTTCTGGCATGGAT
CTGATCGGCGCCCCTGTGTTCGCTAAGGACTTTGTGGTGGCTGGCACGTG
CGCCGCCAACCTGTACGGGCTGTGTGAGTCCTTCTTTAAGCCAGATTTAG
AGCCAGAGCAACTCTTCGAGGTTCTCTCTCAGTCCTTGCTCGCGTCCGTA
GATAGGGACGCTCTGAGCGGCTGGGGCGCGGTCGTCCACGTCATTACTCC
AGATGGTGTGACGTCGCGGACATTGAAAGCCAGACAGGATTAAATGACAT
TCTGTACTCACAGCCCGCTTGAACATTTGCCGGCTTGCGCTTCCAGCGAA
GTCGTCCATCTCAACACATTtgtcccttccccatcaaACCCATCAAACAG
GCCAGCGTCAGACGTGTGCTCTTCCGGTAcgacaaaaaaagaaaattcgT
ACTCTTTTGCTGAAAATCTGACTCGCGAGATTCATGGTAATAACGATCCT
ATCATCCCTTGGCAACTTCAGTCTATTCTCGAATATAATGGCGGAGCAGT
TGTGGCGATGGTGGGCAAGAATTGTGTCGCCATAGCCAGTGACTTGCGGT
ATGGCGTCCAGGCGCAGACAGTGGCCTGCAATTTTCCCAAGGTCCACAAG
ATGAGCGACCGCCTCTTCGTGGGGCTCTCGGGCCTGGCCACAGACATCCA
GACCCTCGAGCAGCTCTTACGTTTTCGCCTCAACCTGTACAAGCTGCGAG
AGGAACGAGACATAAAGCCGGAGactttctccgccctcctctcccacatc
CTATACGAGAAGCGTTTCGGACCTTACTTCGTGGAGCCCCTGGTAGCGGG
GttgagggcggaggacaaCACCCCTTTCATTTCTGGCATGGATCTGATCG
GCGCCCCTGTGTTCGCTAAGGACTTTGTGGTGGCTGGCACGTGCGCCGCC
AACCTGTACGGGCTGTGTGAGTCCTTCTTTAAGCCAGATTTAGAGCCAGA
GCAACTCTTCGAGGTTCTCTCTCAGTCCTTGCTCGCGTCCGTAGATAGGG
ACGCTCTGAGCGGCTGGGGCGCGGTCGTCCACGTCATTACTCCAGATGGT
GTGACGTCGCGGACATTGAAAGCCAGACAGGATTAAATGACATTCTGTAC
TCACAGCCCGCTTGAACATTTGCCGGCTTGCGCTTCCAGCGAAGTCGTCC
ATCTCAACACATTtgtcccttccccatcaaACCCATCAAACAGGCCAGCG
TCAGACGTGTGCTCTTCCGGTAcgacaaaaaaagaaaattcgTACTCTTT
TGCTGAAAATCTGACTCGCGAGATTCATGGTAATAACGATCCTATCATCC
CTTGGCAACTTCAGTCTATTCTCGAATATAATGGCGGAGCAGTTGTGGCG
ATGGTGGGCAAGAATTGTGTCGCCATAGCCAGTGACTTGCGGTATGGCGT
CCAGGCGCAGACAGTGGCCTGCAATTTTCCCAAGGTCCACAAGATGAGCG
ACCGCCTCTTCGTGGGGCTCTCGGGCCTGGCCACAGACATCCAGACCCTC
GAGCAGCTCTTACGTTTTCGCCTCAACCTGTACAAGCTGCGAGAGGAACG
AGACATAAAGCCGGAGactttctccgccctcctctcccacatcCTATACG
AGAAGCGTTTCGGACCTTACTTCGTGGAGCCCCTGGTAGCGGGGttgagg
gcggaggacaaCACCCCTTTCATTTCTGGCATGGATCTGATCGGCGCCCC
TGTGTTCGCTAAGGACTTTGTGGTGGCTGGCACGTGCGCCGCCAACCTGT
ACGGGCTGTGTGAGTCCTTCTTTAAGCCAGATTTAGAGCCAGAGCAACTC
TTCGAGGTTCTCTCTCAGTCCTTGCTCGCGTCCGTAGATAGGGACGCTCT
GAGCGGCTGGGGCGCGGTCGTCCACGTCATTACTCCAGATGGTGTGACGT
CGCGGACATTGAAAGCCAGACAGGATTAAATGACATTCTGTACTCACAGC
CCGCTTGAACATTTGCCGGCTTGCGCTTCCAGCGAAGTCGTCCATCTCAA
CACATTtgtcccttccccatcaaACCCATCAAACAGGCCAGCGTCAGACG
TGTGCTCTTCCGGTAcgacaaaaaaagaaaattcgTACTCTTTTGCTGAA
AATCTGACTCGCGAGATTCATGGTAATAACGATCCTATCATCCCTTGGCA
ACTTCAGTCTATTCTCGAATATAATGGCGGAGCAGTTGTGGCGATGGTGG
GCAAGAATTGTGTCGCCATAGCCAGTGACTTGCGGTATGGCGTCCAGGCG
CAGACAGTGGCCTGCAATTTTCCCAAGGTCCACAAGATGAGCGACCGCCT
CTTCGTGGGGCTCTCGGGCCTGGCCACAGACATCCAGACCCTCGAGCAGC
TCTTACGTTTTCGCCTCAACCTGTACAAGCTGCGAGAGGAACGAGACATA
AAGCCGGAGactttctccgccctcctctcccacatcCTATACGAGAAGCG
TTTCGGACCTTACTTCGTGGAGCCCCTGGTAGCGGGGttgagggcggagg
acaaCACCCCTTTCATTTCTGGCATGGATCTGATCGGCGCCCCTGTGTTC
GCTAAGGACTTTGTGGTGGCTGGCACGTGCGCCGCCAACCTGTACGGGCT
GTGTGAGTCCTTCTTTAAGCCAGATTTAGAGCCAGAGCAACTCTTCGAGG
TTCTCTCTCAGTCCTTGCTCGCGTCCGTAGATAGGGACGCTCTGAGCGGC
TGGGGCGCGGTCGTCCACGTCATTACTCCAGATGGTGTGACGTCGCGGAC
ATTGAAAGCCAGACAGGATTAAATGACATTCTGTACTCACAGCCCGCTTG
AACATTTGCCGGCTTGCGCTTCCAGCGAAGTCGTCCATCTCAACACATTt
gtcccttccccatcaaACCCATCAAACAGGCCAGCGTCAGACGTGTGCTC
TTCCGGTAcgacaaaaaaagaaaattcgTACTCTTTTGCTGAAAATCTGA
CTCGCGAGATTCATGGTAATAACGATCCTATCATCCCTTGGCAACTTCAG
TCTATTCTCGAATATAATGGCGGAGCAGTTGTGGCGATGGTGGGCAAGAA
TTGTGTCGCCATAGCCAGTGACTTGCGGTATGGCGTCCAGGCGCAGACAG
TGGCCTGCAATTTTCCCAAGGTCCACAAGATGAGCGACCGCCTCTTCGTG
GGGCTCTCGGGCCTGGCCACAGACATCCAGACCCTCGAGCAGCTCTTACG
TTTTCGCCTCAACCTGTACAAGCTGCGAGAGGAACGAGACATAAAGCCGG
AGactttctccgccctcctctcccacatcCTATACGAGAAGCGTTTCGGA
CCTTACTTCGTGGAGCCCCTGGTAGCGGGGttgagggcggaggacaaCAC
CCCTTTCATTTCTGGCATGGATCTGATCGGCGCCCCTGTGTTCGCTAAGG
ACTTTGTGGTGGCTGGCACGTGCGCCGCCAACCTGTACGGGCTGTGTGAG
TCCTTCTTTAAGCCAGATTTAGAGCCAGAGCAACTCTTCGAGGTTCTCTC
TCAGTCCTTGCTCGCGTCCGTAGATAGGGACGCTCTGAGCGGCTGGGGCG
CGGTCGTCCACGTCATTACTCCAGATGGTGTGACGTCGCGGACATTGAAA
GCCAGACAGGATTAA back to top
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